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| author | Ricardo Wurmus <rekado@elephly.net> | 2018-07-27 15:13:56 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2018-07-27 15:30:38 +0200 |
| commit | ed2dfe3955f0144bc858c66fdb751f51e9bd84fe (patch) | |
| tree | 5e8fdebcf590d21cc62db8400426e93dd44405dc /gnu/packages/python.scm | |
| parent | 269f100330cf92afdc911bbd7db0644719d6dc3f (diff) | |
| download | guix-ed2dfe3955f0144bc858c66fdb751f51e9bd84fe.tar.gz guix-ed2dfe3955f0144bc858c66fdb751f51e9bd84fe.tar.xz | |
gnu: Add snakemake-4.
* gnu/packages/python.scm (snakemake-4): New variable.
* gnu/packages/bioinformatics.scm (pigx-bsseq, pigx-rnaseq, pigx-scrnaseq,
pigx-chipseq)[inputs]: Use it.
Diffstat (limited to 'gnu/packages/python.scm')
| -rw-r--r-- | gnu/packages/python.scm | 18 |
1 files changed, 18 insertions, 0 deletions
diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index a6e3ebb9d6..e9fb9f529f 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -5206,6 +5206,24 @@ providing a clean and modern domain specific specification language (DSL) in Python style, together with a fast and comfortable execution environment.") (license license:expat))) +;; This is currently needed for the pigx-* packages. +(define-public snakemake-4 + (package (inherit snakemake) + (version "4.4.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "snakemake" version)) + (sha256 + (base32 "0g0paia4z7w3srnqdmavq3hrb2x7qnpf81jx50njl0p7y4y0j8jv")))) + (propagated-inputs + `(("python-wrapt" ,python-wrapt) + ("python-requests" ,python-requests) + ("python-appdirs" ,python-appdirs) + ("python-configargparse" ,python-configargparse) + ("python-pyyaml" ,python-pyyaml) + ("python-ratelimiter" ,python-ratelimiter))))) + (define-public python-pyqrcode (package (name "python-pyqrcode") |