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* gnu: Add python-torchvision.Ricardo Wurmus2022-07-06
| | | | * gnu/packages/machine-learning.scm (python-torchvision): New variable.
* gnu: liblantern: Update to 0.8.0.Ludovic Courtès2022-07-05
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.8.0.
* gnu: python-pytorch: Update to 1.11.0.Ludovic Courtès2022-07-05
| | | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch): Update to 1.11.0. [source](snippet): Remove now unnecessary "caffe2/onnx/backend.cc" substitution. [arguments]: Add 'remove-caffe2-onnx-scripts' phase. * gnu/packages/patches/python-pytorch-runpath.patch, gnu/packages/patches/python-pytorch-system-libraries.patch: Update.
* gnu: onnx: Update to 1.12.0.Ludovic Courtès2022-07-05
| | | | * gnu/packages/machine-learning.scm (onnx): Update to 1.12.0.
* Merge remote-tracking branch 'origin/master' into stagingEfraim Flashner2022-06-01
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| * gnu: Remove python2-autograd.Maxim Cournoyer2022-05-31
| | | | | | | | * gnu/packages/machine-learning.scm (python2-autograd): Delete variable.
| * gnu: Remove python2-fastlmm.Maxim Cournoyer2022-05-31
| | | | | | | | * gnu/packages/machine-learning.scm (python2-fastlmm): Delete variable.
| * gnu: Remove python2-scikit-learn.Maxim Cournoyer2022-05-31
| | | | | | | | | | * gnu/packages/machine-learning.scm (python2-scikit-learn): Delete variable. (python-scikit-learn)[properties]: Remove the python2-variant property.
* | Merge branch 'master' into stagingEfraim Flashner2022-05-16
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| * gnu: python-umap-learn: Update to 0.5.3.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-umap-learn): Update to 0.5.3. [source]: Use git. [arguments]: New field. [native-inputs]: Delete python-joblib and python-nose. Add python-pytest. [propagated-inputs]: Add python-pynndescent and python-tqdm. [synopsis]: Fix indentation. [description]: Fix typo and re-indent.
| * gnu: python-pynndescent: Update to 0.5.6.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.6. [phases]{check}: Skip the test_weighted_minkowski test. [native-inputs, propagated-inputs]: Re-indent.
| * gnu: python-scikit-learn: Parallelize build and test suite.Maxim Cournoyer2022-05-12
| | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn) [phases]{configure}: New phase. {build-ext}: Add '-j' option. {check}: Add '-n' option. [native-inputs]: Add python-pytest-xdist.
* | gnu: openfst: Update to 1.8.2, enable ngram extensionAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | This extension is required by some programs that depend on openfst that aren't yet packaged. * gnu/packages/machine-learning.scm (openfst): Update to 1.8.2. [arguments]: New field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: openfst-1.7.3: Enable ngram-fst extension & C++14 buildAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | | | | | | | The extension doesn't build in old versions of openfst such as 1.7.3 without manually setting CXXFLAGS. This package definition, including this workaround to build extensions successfully, will need to be removed once kaldi is fixed upstream and can be used with up-to-date versions of openfst. * gnu/packages/machine-learning.scm (openfst-1.7.3)[arguments]: New field. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: kaldi: Update to dd107fd, bypass testsAurora2022-05-15
| | | | | | | | | | | | | | | | | | | | | | | | | | Either kaldi's tests are broken or openblas has reintroduced a bug: - https://github.com/kaldi-asr/kaldi/pull/4421 More testing & fixes required upstream to re-enable the tests later. For now they'll just have to be ignored. * gnu/packages/machine-learning.scm (kaldi): Update to dd107fd. [arguments]: In 'configure' phase, modify "matrix/Makefile". Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* | gnu: openfst: Add 1.7.3 for kaldiAurora2022-05-15
|/ | | | | | | | | | | | | | | Kaldi is currently broken with openfst versions newer than 1.7.3 as it changed some of its function signatures. Once Kaldi is patched/fixed, this should be removed. Reference Issues: - https://github.com/kaldi-asr/kaldi/issues/4131 - https://github.com/kaldi-asr/kaldi/issues/4393 * gnu/packages/machine-learning.scm (openfst-1.7.3): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
* gnu: python-hmmlearn: Remove cythonized file.Efraim Flashner2022-04-15
| | | | | * gnu/packages/machine-learning.scm (python-hmmlearn)[source]: Add snippet to remove cythonized file.
* gnu: liblantern: Update to 0.7.2.Ricardo Wurmus2022-03-15
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.7.2.
* gnu: liblantern: Update to 0.7.0.Ricardo Wurmus2022-03-15
| | | | * gnu/packages/machine-learning.scm (liblantern): Update to 0.7.0.
* gnu: python-pytorch-for-r-torch: Reuse python-pytorch.Ricardo Wurmus2022-03-15
| | | | | * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Use definition on python-pytorch, thereby updating to 1.10.2.
* gnu: Add liblantern.Ricardo Wurmus2022-02-11
| | | | * gnu/packages/machine-learning.scm (liblantern): New variable.
* gnu: Add python-pytorch-for-r-torch.Ricardo Wurmus2022-02-11
| | | | | | * gnu/packages/patches/python-pytorch-1.9.0-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. * gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): New variable.
* gnu: python-pytorch: Update to 1.10.2.Ricardo Wurmus2022-02-11
| | | | * gnu/packages/machine-learning.scm (python-pytorch): Update to 1.10.2.
* gnu: xgboost: Update to 1.5.2.Vinicius Monego2022-01-24
| | | | | | | | | * gnu/packages/machine-learning.scm (xgboost, python-xgboost): Update to 1.5.2. (python-xgboost)[arguments]: Enable previously failing test. * gnu/packages/patches/xgboost-use-system-dmlc-core.patch: Update patch. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
* gnu: python-scikit-learn: Update to 1.0.2.Marius Bakke2022-01-19
| | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.2.
* Merge branch 'version-1.4.0'Maxim Cournoyer2022-01-17
|\ | | | | | | | | | | | | With resolved conflicts in: gnu/packages/gnome.scm gnu/packages/openstack.scm gnu/packages/python-xyz.scm
| * gnu: python-scikit-learn: Remove obsolete phase.Sarah Morgensen2022-01-10
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn)[arguments] <#:phases>: Remove 'make-files-writable phase. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
* | gnu: python-opentsne: Update to 0.6.1.Vinicius Monego2022-01-14
| | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-opentsne): Update to 0.6.1. [source]<file-name>: Use git-file-name. [arguments]<#:phases>: Don't return #t. Add 'skip-test phase after 'unpack to skip a failing test.
* | gnu: python-pynndescent: Update to 0.5.5.Vinicius Monego2022-01-14
| | | | | | | | | | | | | | | | * gnu/packages/machine-learning.scm (python-pynndescent): Update to 0.5.5. [arguments]<#:phases>: Override 'check phase. [native-inputs]: Remove python-nose. Add python-pytest. Signed-off-by: Nicolas Goaziou <mail@nicolasgoaziou.fr>
* | gnu: python-scikit-rebate: Update to 0.62.Marius Bakke2022-01-11
|/ | | | | | * gnu/packages/machine-learning.scm (python-scikit-rebate): Update to 0.62. [arguments]: Disable tests. [native-inputs]: Remove.
* gnu: Add guile-aiscm-next.Ricardo Wurmus2021-12-28
| | | | * gnu/packages/machine-learning.scm (guile-aiscm-next): New variable.
* gnu: guile-aiscm: Remove opencv and tensorflow.Ricardo Wurmus2021-12-28
| | | | | * gnu/packages/machine-learning.scm (guile-aiscm)[inputs]: Remove opencv and tensorflow.
* gnu: guile-aiscm: Remove timestamp from documentation.Ricardo Wurmus2021-12-28
| | | | | * gnu/packages/machine-learning.scm (guile-aiscm)[arguments]: Add phase 'build-reproducibly.
* gnu: tensorflow: Install C headers.Ricardo Wurmus2021-12-28
| | | | | | | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Add build phase 'patch-cmake-file-to-install-c-headers; move setting of LDFLAGS from 'build-pip-package to 'unpack-third-party-sources; move 'build-pip-package after 'install phase. [source]: Add patch. * gnu/packages/patches/tensorflow-c-api-fix.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
* gnu: Add guile-aiscm.Ricardo Wurmus2021-12-27
| | | | * gnu/packages/machine-learning.scm (guile-aiscm): New variable.
* gnu: tensorflow: Fix build with newer numpy.Ricardo Wurmus2021-12-15
| | | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Rename 'python3.7-compatibility to 'python3.9-compatibility and patch file to allow building with newer numpy.
* gnu: tensorflow: Do not unpack directory.Ricardo Wurmus2021-12-14
| | | | | * gnu/packages/machine-learning.scm (tensorflow)[arguments]: Copy Eigen source code instead of trying to unpack it.
* gnu: Further simplify package inputs.Ludovic Courtès2021-12-13
| | | | | | | | | This is the result of running: ./pre-inst-env guix style --input-simplification=safe and manually undoing changes on a dozen of packages to reduce rebuilds (derivations for emacs, icecat, and libreoffice are unchanged.)
* gnu: Simplify package inputs.Ludovic Courtès2021-12-13
| | | | | | | | This commit was obtained by running: ./pre-inst-env guix style without any additional argument.
* gnu: python2-scikit-learn: Disable one more test.Ricardo Wurmus2021-12-09
| | | | | | * gnu/packages/machine-learning.scm (python2-scikit-learn)[arguments]: Do not inherit; remove obsolete 'make-files-writable phase; disable one more failing test in 'check phase.
* gnu: libsvm: Install header and library.Ricardo Wurmus2021-12-09
| | | | | * gnu/packages/machine-learning.scm (libsvm)[arguments]: Add build phase 'build-lib; also install header file and shared library in the 'install phase.
* gnu: ocaml-mcl: Add -fcommon to compiler flags.Ricardo Wurmus2021-12-08
| | | | * gnu/packages/machine-learning.scm (ocaml-mcl)[arguments]: Add -fcommon.
* gnu: mcl: Add -fcommon to compiler flags.Ricardo Wurmus2021-12-07
| | | | * gnu/packages/machine-learning.scm (mcl)[arguments]: Set CFLAGS.
* Merge remote-tracking branch 'origin/master' into core-updates-frozenRicardo Wurmus2021-12-05
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| * gnu: randomjungle: Fix compatibility errors.Ricardo Wurmus2021-12-02
| | | | | | | | | | * gnu/packages/machine-learning.scm (randomjungle)[arguments]: Add build phase 'fix-compatibility-errors to patch type errors.
* | gnu: python-scikit-learn: Update to 1.0.1.Ricardo Wurmus2021-11-20
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn): Update to 1.0.1. [arguments]: Disable one failing network test.
* | gnu: python-scikit-learn: Run tests conditionally.Ricardo Wurmus2021-11-20
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-scikit-learn)[arguments]: Respect TESTS? in 'check phase.
* | gnu: python-pytorch: Warn of missing test inputs.Ricardo Wurmus2021-11-20
| | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch): Add comment.
* | gnu: python-pytorch: Add missing input.Ricardo Wurmus2021-11-20
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch)[propagated-inputs]: Add python-click.
* | gnu: python-pytorch: Use ADD-INSTALLED-PYTHONPATH.Ricardo Wurmus2021-11-20
| | | | | | | | | | * gnu/packages/machine-learning.scm (python-pytorch)[arguments]: Do not set PYTHONPATH; use add-installed-pythonpath instead.
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