245 files changed, 6151 insertions, 1559 deletions

diff --git a/.gitignore b/.gitignore
index 8df8f88be..7b3acb766 100644
--- a/.gitignore
+++ b/.gitignore
@@ -177,6 +177,7 @@
 *.exe
 *.[aos]
 *.py[co]
+*.o.d
 *+
 /config.mak
 /autom4te.cache
diff --git a/Documentation/RelNotes-1.7.0.2.txt b/Documentation/RelNotes-1.7.0.2.txt
new file mode 100644
index 000000000..fcb46ca6a
--- /dev/null
+++ b/Documentation/RelNotes-1.7.0.2.txt
@@ -0,0 +1,40 @@
+Git v1.7.0.2 Release Notes
+==========================
+
+Fixes since v1.7.0.1
+--------------------
+
+ * GIT_PAGER was not honored consistently by some scripted Porcelains, most
+   notably "git am".
+
+ * updating working tree files after telling git to add them to the
+   index and while it is still working created garbage object files in
+   the repository without diagnosing it as an error.
+
+ * "git bisect -- pathspec..." did not diagnose an error condition properly when
+   the simplification with given pathspec made the history empty.
+
+ * "git rev-list --cherry-pick A...B" now has an obvious optimization when the
+   histories haven't diverged (i.e. when one end is an ancestor of the other).
+
+ * "git diff --quiet -w" did not work as expected.
+
+ * "git fast-import" didn't work with a large input, as it lacked support
+   for producing the pack index in v2 format.
+
+ * "git imap-send" didn't use CRLF line endings over the imap protocol
+   when storing its payload to the draft box, violating RFC 3501.
+
+ * "git log --format='%w(x,y,z)%b'" and friends that rewrap message
+   has been optimized for utf-8 payload.
+
+ * Error messages generated on the receiving end did not come back to "git
+   push".
+
+ * "git status" in 1.7.0 lacked the optimization we used to have in 1.6.X series
+   to speed up scanning of large working tree.
+
+ * "gitweb" did not diagnose parsing errors properly while reading tis configuration
+   file.
+
+And other minor fixes and documentation updates.
diff --git a/Documentation/RelNotes-1.7.0.3.txt b/Documentation/RelNotes-1.7.0.3.txt
new file mode 100644
index 000000000..60bcbff11
--- /dev/null
+++ b/Documentation/RelNotes-1.7.0.3.txt
@@ -0,0 +1,40 @@
+Git v1.7.0.3 Release Notes (draft)
+==================================
+
+Fixes since v1.7.0.2
+--------------------
+
+ * Object files are created in a more ACL friendly way in repositories
+   where group permission is ACL controlled.
+
+ * "git add -i" didn't handle a deleted path very well.
+
+ * "git blame" padded line numbers with one extra SP when the total number
+   of lines was one less than multiple of ten due to an off-by-one error.
+
+ * "git fetch --all/--multi" used to discard information for remotes that
+   are fetched earlier.
+
+ * "git log --author=me --grep=it" tried to find commits that have "it"
+   or are written by "me", instead of the ones that have "it" _and_ are
+   written by "me".
+
+ * "git log -g branch" misbehaved when there was no entries in the reflog
+   for the named branch.
+
+ * "git mailinfo" (hence "git am") incorrectly removed initial indent from
+   paragraphs.
+
+ * "git prune" and "git reflog" (hence "git gc" as well) didn't honor
+   an instruction never to expire by setting gc.reflogexpire to never.
+
+ * "git push" misbehaved when branch.<name>.merge was configured without
+   matching branch.<name>.remote.
+
+And other minor fixes and documentation updates.
+
+--
+exec >/var/tmp/1
+echo O=$(git describe)
+O=v1.7.0.2-69-g730b020
+git shortlog --no-merges $O..
diff --git a/Documentation/RelNotes-1.7.1.txt b/Documentation/RelNotes-1.7.1.txt
index 8c18ca5d2..dfc06cb3d 100644
--- a/Documentation/RelNotes-1.7.1.txt
+++ b/Documentation/RelNotes-1.7.1.txt
@@ -1,12 +1,30 @@
-Git v1.7.1 Release Notes
-========================
+Git v1.7.1 Release Notes (draft)
+================================
 
 Updates since v1.7.0
 --------------------
 
+ * "git cvsimport" learned -R option to leave revision mapping between
+   CVS revisions and resulting git commits.
+
+ * "git for-each-ref" learned %(symref), %(symref:short) and %(flag)
+   tokens.
+
  * "git grep" learned "--no-index" option, to search inside contents that
    are not managed by git.
 
+ * "git grep" learned --color=auto/always/never.
+
+ * "git hash-object --stdin-paths" can take "--no-filters" option now.
+
+ * "git request-pull" identifies the commit the request is relative to in
+   a more readable way.
+
+ * "git svn" should work better when interacting with repositories
+   with CRLF line endings.
+
+ * "git imap-send" learned to support CRAM-MD5 authentication.
+
 Fixes since v1.7.0
 ------------------
 
@@ -16,5 +34,5 @@ release, unless otherwise noted.
 ---
 exec >/var/tmp/1
 echo O=$(git describe)
-O=v1.7.0-36-gfaa3b47
+O=v1.7.0.2-181-gc6830a3
 git shortlog --no-merges ^maint $O..
diff --git a/Documentation/config.txt b/Documentation/config.txt
index 88e1d49d6..1dbded0fd 100644
--- a/Documentation/config.txt
+++ b/Documentation/config.txt
@@ -555,6 +555,13 @@ it will be treated as a shell command.  For example, defining
 executed from the top-level directory of a repository, which may
 not necessarily be the current directory.
 
+am.keepcr::
+	If true, git-am will call git-mailsplit for patches in mbox format
+	with parameter '--keep-cr'. In this case git-mailsplit will
+	not remove `\r` from lines ending with `\r\n`. Can be overrriden
+	by giving '--no-keep-cr' from the command line.
+	See linkgit:git-am[1], linkgit:git-mailsplit[1].
+
 apply.ignorewhitespace::
 	When set to 'change', tells 'git apply' to ignore changes in
 	whitespace, in the same way as the '--ignore-space-change'
@@ -1223,6 +1230,10 @@ imap::
 	The configuration variables in the 'imap' section are described
 	in linkgit:git-imap-send[1].
 
+init.templatedir::
+	Specify the directory from which templates will be copied.
+	(See the "TEMPLATE DIRECTORY" section of linkgit:git-init[1].)
+
 instaweb.browser::
 	Specify the program that will be used to browse your working
 	repository in gitweb. See linkgit:git-instaweb[1].
@@ -1462,7 +1473,7 @@ receive.denyCurrentBranch::
 	out of sync with the index and working tree. If set to "warn",
 	print a warning of such a push to stderr, but allow the push to
 	proceed. If set to false or "ignore", allow such pushes with no
-	message. Defaults to "warn".
+	message. Defaults to "refuse".
 
 receive.denyNonFastForwards::
 	If set to true, git-receive-pack will deny a ref update which is
diff --git a/Documentation/diff-options.txt b/Documentation/diff-options.txt
index 8707d0e74..60e922e6e 100644
--- a/Documentation/diff-options.txt
+++ b/Documentation/diff-options.txt
@@ -117,12 +117,14 @@ any of those replacements occurred.
 	option and lists the commits in that commit range like the 'summary'
 	option of linkgit:git-submodule[1] does.
 
---color::
+--color[=<when>]::
 	Show colored diff.
+	The value must be always (the default), never, or auto.
 
 --no-color::
 	Turn off colored diff, even when the configuration file
 	gives the default to color output.
+	Same as `--color=never`.
 
 --color-words[=<regex>]::
 	Show colored word diff, i.e., color words which have changed.
diff --git a/Documentation/fetch-options.txt b/Documentation/fetch-options.txt
index fe716b2e4..044ec882c 100644
--- a/Documentation/fetch-options.txt
+++ b/Documentation/fetch-options.txt
@@ -78,9 +78,16 @@ ifndef::git-pull[]
 -q::
 --quiet::
 	Pass --quiet to git-fetch-pack and silence any other internally
-	used git commands.
+	used git commands. Progress is not reported to the standard error
+	stream.
 
 -v::
 --verbose::
 	Be verbose.
 endif::git-pull[]
+
+--progress::
+	Progress status is reported on the standard error stream
+	by default when it is attached to a terminal, unless -q
+	is specified. This flag forces progress status even if the
+	standard error stream is not directed to a terminal.
diff --git a/Documentation/git-am.txt b/Documentation/git-am.txt
index c66c565bb..9e62f8778 100644
--- a/Documentation/git-am.txt
+++ b/Documentation/git-am.txt
@@ -9,7 +9,7 @@ git-am - Apply a series of patches from a mailbox
 SYNOPSIS
 --------
 [verse]
-'git am' [--signoff] [--keep] [--utf8 | --no-utf8]
+'git am' [--signoff] [--keep] [--keep-cr | --no-keep-cr] [--utf8 | --no-utf8]
 	 [--3way] [--interactive] [--committer-date-is-author-date]
 	 [--ignore-date] [--ignore-space-change | --ignore-whitespace]
 	 [--whitespace=<option>] [-C<n>] [-p<n>] [--directory=<dir>]
@@ -39,12 +39,19 @@ OPTIONS
 --keep::
 	Pass `-k` flag to 'git mailinfo' (see linkgit:git-mailinfo[1]).
 
+--keep-cr::
+--no-keep-cr::
+	With `--keep-cr`, call 'git mailsplit' (see linkgit:git-mailsplit[1])
+	with the same option, to prevent it from stripping CR at the end of
+	lines. `am.keepcr` configuration variable can be used to specify the
+	default behaviour.  `--no-keep-cr` is useful to override `am.keepcr`.
+
 -c::
 --scissors::
 	Remove everything in body before a scissors line (see
 	linkgit:git-mailinfo[1]).
 
----no-scissors::
+--no-scissors::
 	Ignore scissors lines (see linkgit:git-mailinfo[1]).
 
 -q::
diff --git a/Documentation/git-branch.txt b/Documentation/git-branch.txt
index 6b6c3da2d..903a690f1 100644
--- a/Documentation/git-branch.txt
+++ b/Documentation/git-branch.txt
@@ -8,7 +8,7 @@ git-branch - List, create, or delete branches
 SYNOPSIS
 --------
 [verse]
-'git branch' [--color | --no-color] [-r | -a]
+'git branch' [--color[=<when>] | --no-color] [-r | -a]
 	[-v [--abbrev=<length> | --no-abbrev]]
 	[(--merged | --no-merged | --contains) [<commit>]]
 'git branch' [--set-upstream | --track | --no-track] [-l] [-f] <branchname> [<start-point>]
@@ -84,12 +84,14 @@ OPTIONS
 -M::
 	Move/rename a branch even if the new branch name already exists.
 
---color::
+--color[=<when>]::
 	Color branches to highlight current, local, and remote branches.
+	The value must be always (the default), never, or auto.
 
 --no-color::
 	Turn off branch colors, even when the configuration file gives the
 	default to color output.
+	Same as `--color=never`.
 
 -r::
 	List or delete (if used with -d) the remote-tracking branches.
diff --git a/Documentation/git-clone.txt b/Documentation/git-clone.txt
index 88ea6246a..43cfba0e4 100644
--- a/Documentation/git-clone.txt
+++ b/Documentation/git-clone.txt
@@ -102,7 +102,8 @@ objects from the source repository into a pack in the cloned repository.
 
 --verbose::
 -v::
-	Run verbosely.
+	Run verbosely. Does not affect the reporting of progress status
+	to the standard error stream.
 
 --progress::
 	Progress status is reported on the standard error stream
@@ -149,8 +150,7 @@ objects from the source repository into a pack in the cloned repository.
 
 --template=<template_directory>::
 	Specify the directory from which templates will be used;
-	if unset the templates are taken from the installation
-	defined default, typically `/usr/share/git-core/templates`.
+	(See the "TEMPLATE DIRECTORY" section of linkgit:git-init[1].)
 
 --depth <depth>::
 	Create a 'shallow' clone with a history truncated to the
diff --git a/Documentation/git-cvsimport.txt b/Documentation/git-cvsimport.txt
index ddfcb3d14..8bcd875a6 100644
--- a/Documentation/git-cvsimport.txt
+++ b/Documentation/git-cvsimport.txt
@@ -13,7 +13,7 @@ SYNOPSIS
 	      [-A <author-conv-file>] [-p <options-for-cvsps>] [-P <file>]
 	      [-C <git_repository>] [-z <fuzz>] [-i] [-k] [-u] [-s <subst>]
 	      [-a] [-m] [-M <regex>] [-S <regex>] [-L <commitlimit>]
-	      [-r <remote>] [<CVS_module>]
+	      [-r <remote>] [-R] [<CVS_module>]
 
 
 DESCRIPTION
@@ -157,6 +157,22 @@ It is not recommended to use this feature if you intend to
 export changes back to CVS again later with
 'git cvsexportcommit'.
 
+-R::
+	Generate a `$GIT_DIR/cvs-revisions` file containing a mapping from CVS
+	revision numbers to newly-created Git commit IDs.  The generated file
+	will contain one line for each (filename, revision) pair imported;
+	each line will look like
++
+---------
+src/widget.c 1.1 1d862f173cdc7325b6fa6d2ae1cfd61fd1b512b7
+---------
++
+The revision data is appended to the file if it already exists, for use when
+doing incremental imports.
++
+This option may be useful if you have CVS revision numbers stored in commit
+messages, bug-tracking systems, email archives, and the like.
+
 -h::
 	Print a short usage message and exit.
 
diff --git a/Documentation/git-format-patch.txt b/Documentation/git-format-patch.txt
index 9674f9de6..835fb7135 100644
--- a/Documentation/git-format-patch.txt
+++ b/Documentation/git-format-patch.txt
@@ -18,7 +18,7 @@ SYNOPSIS
 		   [--in-reply-to=Message-Id] [--suffix=.<sfx>]
 		   [--ignore-if-in-upstream]
 		   [--subject-prefix=Subject-Prefix]
-		   [--cc=<email>]
+		   [--to=<email>] [--cc=<email>]
 		   [--cover-letter]
 		   [<common diff options>]
 		   [ <since> | <revision range> ]
@@ -162,6 +162,10 @@ will want to ensure that threading is disabled for `git send-email`.
 	allows for useful naming of a patch series, and can be
 	combined with the `--numbered` option.
 
+--to=<email>::
+	Add a `To:` header to the email headers. This is in addition
+	to any configured headers, and may be used multiple times.
+
 --cc=<email>::
 	Add a `Cc:` header to the email headers. This is in addition
 	to any configured headers, and may be used multiple times.
@@ -202,8 +206,8 @@ CONFIGURATION
 -------------
 You can specify extra mail header lines to be added to each message,
 defaults for the subject prefix and file suffix, number patches when
-outputting more than one patch, add "Cc:" headers, configure attachments,
-and sign off patches with configuration variables.
+outputting more than one patch, add "To" or "Cc:" headers, configure
+attachments, and sign off patches with configuration variables.
 
 ------------
 [format]
@@ -211,6 +215,7 @@ and sign off patches with configuration variables.
 	subjectprefix = CHANGE
 	suffix = .txt
 	numbered = auto
+	to = <email>
 	cc = <email>
 	attach [ = mime-boundary-string ]
 	signoff = true
diff --git a/Documentation/git-grep.txt b/Documentation/git-grep.txt
index c44724d03..4b32322a6 100644
--- a/Documentation/git-grep.txt
+++ b/Documentation/git-grep.txt
@@ -9,8 +9,7 @@ git-grep - Print lines matching a pattern
 SYNOPSIS
 --------
 [verse]
-'git grep' [--cached]
-	   [-a | --text] [-I] [-i | --ignore-case] [-w | --word-regexp]
+'git grep' [-a | --text] [-I] [-i | --ignore-case] [-w | --word-regexp]
 	   [-v | --invert-match] [-h|-H] [--full-name]
 	   [-E | --extended-regexp] [-G | --basic-regexp]
 	   [-F | --fixed-strings] [-n]
@@ -18,10 +17,11 @@ SYNOPSIS
 	   [-z | --null]
 	   [-c | --count] [--all-match] [-q | --quiet]
 	   [--max-depth <depth>]
-	   [--color | --no-color]
+	   [--color[=<when>] | --no-color]
 	   [-A <post-context>] [-B <pre-context>] [-C <context>]
 	   [-f <file>] [-e] <pattern>
-	   [--and|--or|--not|(|)|-e <pattern>...] [<tree>...]
+	   [--and|--or|--not|(|)|-e <pattern>...]
+	   [--cached | --no-index | <tree>...]
 	   [--] [<pathspec>...]
 
 DESCRIPTION
@@ -33,8 +33,11 @@ registered in the index file, or blobs in given tree objects.
 OPTIONS
 -------
 --cached::
-	Instead of searching in the working tree files, check
-	the blobs registered in the index file.
+	Instead of searching tracked files in the working tree, search
+	blobs registered in the index file.
+
+--no-index::
+	Search files in the current directory, not just those tracked by git.
 
 -a::
 --text::
@@ -98,8 +101,8 @@ OPTIONS
 --files-without-match::
 	Instead of showing every matched line, show only the
 	names of files that contain (or do not contain) matches.
-	For better compatibility with 'git diff', --name-only is a
-	synonym for --files-with-matches.
+	For better compatibility with 'git diff', `--name-only` is a
+	synonym for `--files-with-matches`.
 
 -z::
 --null::
@@ -111,12 +114,14 @@ OPTIONS
 	Instead of showing every matched line, show the number of
 	lines that match.
 
---color::
+--color[=<when>]::
 	Show colored matches.
+	The value must be always (the default), never, or auto.
 
 --no-color::
 	Turn off match highlighting, even when the configuration file
 	gives the default to color output.
+	Same as `--color=never`.
 
 -[ABC] <context>::
 	Show `context` trailing (`A` -- after), or leading (`B`
@@ -125,7 +130,7 @@ OPTIONS
 	matches.
 
 -<num>::
-	A shortcut for specifying -C<num>.
+	A shortcut for specifying `-C<num>`.
 
 -p::
 --show-function::
@@ -140,7 +145,7 @@ OPTIONS
 
 -e::
 	The next parameter is the pattern. This option has to be
-	used for patterns starting with - and should be used in
+	used for patterns starting with `-` and should be used in
 	scripts passing user input to grep.  Multiple patterns are
 	combined by 'or'.
 
@@ -163,8 +168,9 @@ OPTIONS
 	Do not output matched lines; instead, exit with status 0 when
 	there is a match and with non-zero status when there isn't.
 
-`<tree>...`::
-	Search blobs in the trees for specified patterns.
+<tree>...::
+	Instead of searching tracked files in the working tree, search
+	blobs in the given trees.
 
 \--::
 	Signals the end of options; the rest of the parameters
@@ -174,8 +180,8 @@ OPTIONS
 	If given, limit the search to paths matching at least one pattern.
 	Both leading paths match and glob(7) patterns are supported.
 
-Example
--------
+Examples
+--------
 
 git grep 'time_t' -- '*.[ch]'::
 	Looks for `time_t` in all tracked .c and .h files in the working
diff --git a/Documentation/git-hash-object.txt b/Documentation/git-hash-object.txt
index 479fce469..6904739a4 100644
--- a/Documentation/git-hash-object.txt
+++ b/Documentation/git-hash-object.txt
@@ -10,7 +10,7 @@ SYNOPSIS
 --------
 [verse]
 'git hash-object' [-t <type>] [-w] [--path=<file>|--no-filters] [--stdin] [--] <file>...
-'git hash-object' [-t <type>] [-w] --stdin-paths < <list-of-paths>
+'git hash-object' [-t <type>] [-w] --stdin-paths [--no-filters] < <list-of-paths>
 
 DESCRIPTION
 -----------
diff --git a/Documentation/git-imap-send.txt b/Documentation/git-imap-send.txt
index 57db955bd..6cafbe2ec 100644
--- a/Documentation/git-imap-send.txt
+++ b/Documentation/git-imap-send.txt
@@ -71,6 +71,10 @@ imap.preformattedHTML::
 	option causes Thunderbird to send the patch as a plain/text,
 	format=fixed email.  Default is `false`.
 
+imap.authMethod::
+	Specify authenticate method for authentication with IMAP server.
+	Current supported method is 'CRAM-MD5' only.
+
 Examples
 ~~~~~~~~
 
diff --git a/Documentation/git-init.txt b/Documentation/git-init.txt
index 7ee102da4..246b07ebf 100644
--- a/Documentation/git-init.txt
+++ b/Documentation/git-init.txt
@@ -28,14 +28,8 @@ current working directory.
 
 --template=<template_directory>::
 
-Provide the directory from which templates will be used.  The default template
-directory is `/usr/share/git-core/templates`.
-
-When specified, `<template_directory>` is used as the source of the template
-files rather than the default.  The template files include some directory
-structure, some suggested "exclude patterns", and copies of non-executing
-"hook" files.  The suggested patterns and hook files are all modifiable and
-extensible.
+Specify the directory from which templates will be used.  (See the "TEMPLATE
+DIRECTORY" section below.)
 
 --shared[={false|true|umask|group|all|world|everybody|0xxx}]::
 
@@ -106,6 +100,25 @@ of the repository, such as installing the default hooks and
 setting the configuration variables.  The old name is retained
 for backward compatibility reasons.
 
+TEMPLATE DIRECTORY
+------------------
+
+The template directory contains files and directories that will be copied to
+the `$GIT_DIR` after it is created.
+
+The template directory used will (in order):
+
+ - The argument given with the `--template` option.
+
+ - The contents of the `$GIT_TEMPLATE_DIR` environment variable.
+
+ - The `init.templatedir` configuration variable.
+
+ - The default template directory: `/usr/share/git-core/templates`.
+
+The default template directory includes some directory structure, some
+suggested "exclude patterns", and copies of sample "hook" files.
+The suggested patterns and hook files are all modifiable and extensible.
 
 EXAMPLES
 --------
diff --git a/Documentation/git-mailsplit.txt b/Documentation/git-mailsplit.txt
index 5cc94ec53..a63448528 100644
--- a/Documentation/git-mailsplit.txt
+++ b/Documentation/git-mailsplit.txt
@@ -7,7 +7,7 @@ git-mailsplit - Simple UNIX mbox splitter program
 
 SYNOPSIS
 --------
-'git mailsplit' [-b] [-f<nn>] [-d<prec>] -o<directory> [--] [<mbox>|<Maildir>...]
+'git mailsplit' [-b] [-f<nn>] [-d<prec>] [--keep-cr] -o<directory> [--] [<mbox>|<Maildir>...]
 
 DESCRIPTION
 -----------
@@ -43,6 +43,9 @@ OPTIONS
 	Skip the first <nn> numbers, for example if -f3 is specified,
 	start the numbering with 0004.
 
+--keep-cr::
+	Do not remove `\r` from lines ending with `\r\n`.
+
 Author
 ------
 Written by Linus Torvalds <torvalds@osdl.org>
diff --git a/Documentation/git-merge-file.txt b/Documentation/git-merge-file.txt
index 234269ae5..f334d694e 100644
--- a/Documentation/git-merge-file.txt
+++ b/Documentation/git-merge-file.txt
@@ -10,7 +10,7 @@ SYNOPSIS
 --------
 [verse]
 'git merge-file' [-L <current-name> [-L <base-name> [-L <other-name>]]]
-	[--ours|--theirs] [-p|--stdout] [-q|--quiet]
+	[--ours|--theirs|--union] [-p|--stdout] [-q|--quiet] [--marker-size=<n>]
 	<current-file> <base-file> <other-file>
 
 
@@ -35,9 +35,10 @@ normally outputs a warning and brackets the conflict with lines containing
 	>>>>>>> B
 
 If there are conflicts, the user should edit the result and delete one of
-the alternatives.  When `--ours` or `--theirs` option is in effect, however,
-these conflicts are resolved favouring lines from `<current-file>` or
-lines from `<other-file>` respectively.
+the alternatives.  When `--ours`, `--theirs`, or `--union` option is in effect,
+however, these conflicts are resolved favouring lines from `<current-file>`,
+lines from `<other-file>`, or lines from both respectively.  The length of the
+conflict markers can be given with the `--marker-size` option.
 
 The exit value of this program is negative on error, and the number of
 conflicts otherwise. If the merge was clean, the exit value is 0.
@@ -67,8 +68,9 @@ OPTIONS
 
 --ours::
 --theirs::
+--union::
 	Instead of leaving conflicts in the file, resolve conflicts
-	favouring our (or their) side of the lines.
+	favouring our (or their or both) side of the lines.
 
 
 EXAMPLES
diff --git a/Documentation/git-notes.txt b/Documentation/git-notes.txt
index d4487cab5..bef2f3942 100644
--- a/Documentation/git-notes.txt
+++ b/Documentation/git-notes.txt
@@ -3,57 +3,112 @@ git-notes(1)
 
 NAME
 ----
-git-notes - Add/inspect commit notes
+git-notes - Add/inspect object notes
 
 SYNOPSIS
 --------
 [verse]
-'git notes' (edit [-F <file> | -m <msg>] | show) [commit]
+'git notes' [list [<object>]]
+'git notes' add [-f] [-F <file> | -m <msg> | (-c | -C) <object>] [<object>]
+'git notes' copy [-f] <from-object> <to-object>
+'git notes' append [-F <file> | -m <msg> | (-c | -C) <object>] [<object>]
+'git notes' edit [<object>]
+'git notes' show [<object>]
+'git notes' remove [<object>]
+'git notes' prune
+
 
 DESCRIPTION
 -----------
-This command allows you to add notes to commit messages, without
-changing the commit.  To discern these notes from the message stored
-in the commit object, the notes are indented like the message, after
-an unindented line saying "Notes:".
+This command allows you to add/remove notes to/from objects, without
+changing the objects themselves.
+
+A typical use of notes is to extend a commit message without having
+to change the commit itself. Such commit notes can be shown by `git log`
+along with the original commit message. To discern these notes from the
+message stored in the commit object, the notes are indented like the
+message, after an unindented line saying "Notes:".
 
-To disable commit notes, you have to set the config variable
-core.notesRef to the empty string.  Alternatively, you can set it
-to a different ref, something like "refs/notes/bugzilla".  This setting
-can be overridden by the environment variable "GIT_NOTES_REF".
+To disable notes, you have to set the config variable core.notesRef to
+the empty string.  Alternatively, you can set it to a different ref,
+something like "refs/notes/bugzilla".  This setting can be overridden
+by the environment variable "GIT_NOTES_REF".
 
 
 SUBCOMMANDS
 -----------
 
+list::
+	List the notes object for a given object. If no object is
+	given, show a list of all note objects and the objects they
+	annotate (in the format "<note object> <annotated object>").
+	This is the default subcommand if no subcommand is given.
+
+add::
+	Add notes for a given object (defaults to HEAD). Abort if the
+	object already has notes (use `-f` to overwrite an
+	existing note).
+
+copy::
+	Copy the notes for the first object onto the second object.
+	Abort if the second object already has notes, or if the first
+	object has none (use -f to overwrite existing notes to the
+	second object). This subcommand is equivalent to:
+	`git notes add [-f] -C $(git notes list <from-object>) <to-object>`
+
+append::
+	Append to the notes of an existing object (defaults to HEAD).
+	Creates a new notes object if needed.
+
 edit::
-	Edit the notes for a given commit (defaults to HEAD).
+	Edit the notes for a given object (defaults to HEAD).
 
 show::
-	Show the notes for a given commit (defaults to HEAD).
+	Show the notes for a given object (defaults to HEAD).
+
+remove::
+	Remove the notes for a given object (defaults to HEAD).
+	This is equivalent to specifying an empty note message to
+	the `edit` subcommand.
 
+prune::
+	Remove all notes for non-existing/unreachable objects.
 
 OPTIONS
 -------
+-f::
+--force::
+	When adding notes to an object that already has notes,
+	overwrite the existing notes (instead of aborting).
+
 -m <msg>::
+--message=<msg>::
 	Use the given note message (instead of prompting).
-	If multiple `-m` (or `-F`) options are given, their
-	values are concatenated as separate paragraphs.
+	If multiple `-m` options are given, their values
+	are concatenated as separate paragraphs.
 
 -F <file>::
+--file=<file>::
 	Take the note message from the given file.  Use '-' to
 	read the note message from the standard input.
-	If multiple `-F` (or `-m`) options are given, their
-	values are concatenated as separate paragraphs.
 
+-C <object>::
+--reuse-message=<object>::
+	Reuse the note message from the given note object.
+
+-c <object>::
+--reedit-message=<object>::
+	Like '-C', but with '-c' the editor is invoked, so that
+	the user can further edit the note message.
 
 Author
 ------
-Written by Johannes Schindelin <johannes.schindelin@gmx.de>
+Written by Johannes Schindelin <johannes.schindelin@gmx.de> and
+Johan Herland <johan@herland.net>
 
 Documentation
 -------------
-Documentation by Johannes Schindelin
+Documentation by Johannes Schindelin and Johan Herland
 
 GIT
 ---
diff --git a/Documentation/git-pack-objects.txt b/Documentation/git-pack-objects.txt
index 034caedc3..8ed09c0b3 100644
--- a/Documentation/git-pack-objects.txt
+++ b/Documentation/git-pack-objects.txt
@@ -115,18 +115,17 @@ base-name::
 
 --honor-pack-keep::
 	This flag causes an object already in a local pack that
-	has a .keep file to be ignored, even if it appears in the
-	standard input.
+	has a .keep file to be ignored, even if it it would have
+	otherwise been packed.
 
 --incremental::
-	This flag causes an object already in a pack ignored
-	even if it appears in the standard input.
+	This flag causes an object already in a pack to be ignored
+	even if it would have otherwise been packed.
 
 --local::
-	This flag is similar to `--incremental`; instead of
-	ignoring all packed objects, it only ignores objects
-	that are packed and/or not in the local object store
-	(i.e. borrowed from an alternate).
+	This flag causes an object that is borrowed from an alternate
+	object store to be ignored even if it would have otherwise been
+	packed.
 
 --non-empty::
         Only create a packed archive if it would contain at
diff --git a/Documentation/git-pull.txt b/Documentation/git-pull.txt
index 31f42ea21..ab4de1035 100644
--- a/Documentation/git-pull.txt
+++ b/Documentation/git-pull.txt
@@ -31,6 +31,16 @@ in a state that is hard to back out of in the case of a conflict.
 OPTIONS
 -------
 
+-q::
+--quiet::
+	This is passed to both underlying git-fetch to squelch reporting of
+	during transfer, and underlying git-merge to squelch output during
+	merging.
+
+-v::
+--verbose::
+	Pass --verbose to git-fetch and git-merge.
+
 Options related to merging
 ~~~~~~~~~~~~~~~~~~~~~~~~~~
 
diff --git a/Documentation/git-push.txt b/Documentation/git-push.txt
index 49b6bd9d9..59dc8b197 100644
--- a/Documentation/git-push.txt
+++ b/Documentation/git-push.txt
@@ -146,14 +146,21 @@ useful if you write an alias or script around 'git push'.
 	receiver share many of the same objects in common. The default is
 	\--thin.
 
+-q::
+--quiet::
+	Suppress all output, including the listing of updated refs,
+	unless an error occurs. Progress is not reported to the standard
+	error stream.
+
 -v::
 --verbose::
 	Run verbosely.
 
--q::
---quiet::
-	Suppress all output, including the listing of updated refs,
-	unless an error occurs.
+--progress::
+	Progress status is reported on the standard error stream
+	by default when it is attached to a terminal, unless -q
+	is specified. This flag forces progress status even if the
+	standard error stream is not directed to a terminal.
 
 include::urls-remotes.txt[]
 
diff --git a/Documentation/git-read-tree.txt b/Documentation/git-read-tree.txt
index 567671c01..f6037c4f6 100644
--- a/Documentation/git-read-tree.txt
+++ b/Documentation/git-read-tree.txt
@@ -130,7 +130,7 @@ Single Tree Merge
 ~~~~~~~~~~~~~~~~~
 If only 1 tree is specified, 'git read-tree' operates as if the user did not
 specify `-m`, except that if the original index has an entry for a
-given pathname, and the contents of the path matches with the tree
+given pathname, and the contents of the path match with the tree
 being read, the stat info from the index is used. (In other words, the
 index's stat()s take precedence over the merged tree's).
 
@@ -154,40 +154,42 @@ When two trees are specified, the user is telling 'git read-tree'
 the following:
 
      1. The current index and work tree is derived from $H, but
-        the user may have local changes in them since $H;
+	the user may have local changes in them since $H.
 
      2. The user wants to fast-forward to $M.
 
 In this case, the `git read-tree -m $H $M` command makes sure
 that no local change is lost as the result of this "merge".
-Here are the "carry forward" rules:
+Here are the "carry forward" rules, where "I" denotes the index,
+"clean" means that index and work tree coincide, and "exists"/"nothing"
+refer to the presence of a path in the specified commit:
 
-        I (index)           H        M        Result
+	I                   H        M        Result
        -------------------------------------------------------
-      0 nothing             nothing  nothing  (does not happen)
-      1 nothing             nothing  exists   use M
-      2 nothing             exists   nothing  remove path from index
-      3 nothing             exists   exists,  use M if "initial checkout"
+     0  nothing             nothing  nothing  (does not happen)
+     1  nothing             nothing  exists   use M
+     2  nothing             exists   nothing  remove path from index
+     3  nothing             exists   exists,  use M if "initial checkout",
 				     H == M   keep index otherwise
-				     exists   fail
+				     exists,  fail
 				     H != M
 
         clean I==H  I==M
        ------------------
-      4 yes   N/A   N/A     nothing  nothing  keep index
-      5 no    N/A   N/A     nothing  nothing  keep index
+     4  yes   N/A   N/A     nothing  nothing  keep index
+     5  no    N/A   N/A     nothing  nothing  keep index
 
-      6 yes   N/A   yes     nothing  exists   keep index
-      7 no    N/A   yes     nothing  exists   keep index
-      8 yes   N/A   no      nothing  exists   fail
-      9 no    N/A   no      nothing  exists   fail
+     6  yes   N/A   yes     nothing  exists   keep index
+     7  no    N/A   yes     nothing  exists   keep index
+     8  yes   N/A   no      nothing  exists   fail
+     9  no    N/A   no      nothing  exists   fail
 
      10 yes   yes   N/A     exists   nothing  remove path from index
      11 no    yes   N/A     exists   nothing  fail
      12 yes   no    N/A     exists   nothing  fail
      13 no    no    N/A     exists   nothing  fail
 
-        clean (H=M)
+	clean (H==M)
        ------
      14 yes                 exists   exists   keep index
      15 no                  exists   exists   keep index
@@ -202,26 +204,26 @@ Here are the "carry forward" rules:
      21 no    yes   no      exists   exists   fail
 
 In all "keep index" cases, the index entry stays as in the
-original index file.  If the entry were not up to date,
+original index file.  If the entry is not up to date,
 'git read-tree' keeps the copy in the work tree intact when
 operating under the -u flag.
 
 When this form of 'git read-tree' returns successfully, you can
-see what "local changes" you made are carried forward by running
+see which of the "local changes" that you made were carried forward by running
 `git diff-index --cached $M`.  Note that this does not
-necessarily match `git diff-index --cached $H` would have
+necessarily match what `git diff-index --cached $H` would have
 produced before such a two tree merge.  This is because of cases
 18 and 19 --- if you already had the changes in $M (e.g. maybe
 you picked it up via e-mail in a patch form), `git diff-index
 --cached $H` would have told you about the change before this
 merge, but it would not show in `git diff-index --cached $M`
-output after two-tree merge.
+output after the two-tree merge.
 
-Case #3 is slightly tricky and needs explanation.  The result from this
+Case 3 is slightly tricky and needs explanation.  The result from this
 rule logically should be to remove the path if the user staged the removal
 of the path and then switching to a new branch.  That however will prevent
 the initial checkout from happening, so the rule is modified to use M (new
-tree) only when the contents of the index is empty.  Otherwise the removal
+tree) only when the content of the index is empty.  Otherwise the removal
 of the path is kept as long as $H and $M are the same.
 
 3-Way Merge
diff --git a/Documentation/git-reset.txt b/Documentation/git-reset.txt
index 168db0862..645f0c174 100644
--- a/Documentation/git-reset.txt
+++ b/Documentation/git-reset.txt
@@ -8,7 +8,7 @@ git-reset - Reset current HEAD to the specified state
 SYNOPSIS
 --------
 [verse]
-'git reset' [--mixed | --soft | --hard | --merge] [-q] [<commit>]
+'git reset' [--mixed | --soft | --hard | --merge | --keep] [-q] [<commit>]
 'git reset' [-q] [<commit>] [--] <paths>...
 'git reset' --patch [<commit>] [--] [<paths>...]
 
@@ -52,6 +52,14 @@ OPTIONS
 	and updates the files that are different between the named commit
 	and the current commit in the working tree.
 
+--keep::
+	Reset the index to the given commit, keeping local changes in
+	the working tree since the current commit, while updating
+	working tree files without local changes to what appears in
+	the given commit.  If a file that is different between the
+	current commit and the given commit has local changes, reset
+	is aborted.
+
 -p::
 --patch::
 	Interactively select hunks in the difference between the index
@@ -93,6 +101,7 @@ in the index and in state D in HEAD.
 				--mixed  A       D     D
 				--hard   D       D     D
 				--merge (disallowed)
+				--keep  (disallowed)
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -100,6 +109,7 @@ in the index and in state D in HEAD.
 				--mixed  A       C     C
 				--hard   C       C     C
 				--merge (disallowed)
+				--keep   A       C     C
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -107,6 +117,7 @@ in the index and in state D in HEAD.
 				--mixed  B       D     D
 				--hard   D       D     D
 				--merge  D       D     D
+				--keep  (disallowed)
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -114,6 +125,7 @@ in the index and in state D in HEAD.
 				--mixed  B       C     C
 				--hard   C       C     C
 				--merge  C       C     C
+				--keep   B       C     C
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -121,6 +133,7 @@ in the index and in state D in HEAD.
 				--mixed  B       D     D
 				--hard   D       D     D
 				--merge (disallowed)
+				--keep  (disallowed)
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -128,6 +141,7 @@ in the index and in state D in HEAD.
 				--mixed  B       C     C
 				--hard   C       C     C
 				--merge  B       C     C
+				--keep   B       C     C
 
 "reset --merge" is meant to be used when resetting out of a conflicted
 merge. Any mergy operation guarantees that the work tree file that is
@@ -138,6 +152,15 @@ between the index and the work tree, then it means that we are not
 resetting out from a state that a mergy operation left after failing
 with a conflict. That is why we disallow --merge option in this case.
 
+"reset --keep" is meant to be used when removing some of the last
+commits in the current branch while keeping changes in the working
+tree. If there could be conflicts between the changes in the commit we
+want to remove and the changes in the working tree we want to keep,
+the reset is disallowed. That's why it is disallowed if there are both
+changes between the working tree and HEAD, and between HEAD and the
+target. To be safe, it is also disallowed when there are unmerged
+entries.
+
 The following tables show what happens when there are unmerged
 entries:
 
@@ -147,6 +170,7 @@ entries:
 				--mixed  X       B     B
 				--hard   B       B     B
 				--merge  B       B     B
+				--keep  (disallowed)
 
       working index HEAD target         working index HEAD
       ----------------------------------------------------
@@ -154,6 +178,7 @@ entries:
 				--mixed  X       A     A
 				--hard   A       A     A
 				--merge  A       A     A
+				--keep  (disallowed)
 
 X means any state and U means an unmerged index.
 
@@ -325,6 +350,32 @@ $ git add frotz.c                           <3>
 <2> This commits all other changes in the index.
 <3> Adds the file to the index again.
 
+Keep changes in working tree while discarding some previous commits::
++
+Suppose you are working on something and you commit it, and then you
+continue working a bit more, but now you think that what you have in
+your working tree should be in another branch that has nothing to do
+with what you commited previously. You can start a new branch and
+reset it while keeping the changes in your work tree.
++
+------------
+$ git tag start
+$ git checkout -b branch1
+$ edit
+$ git commit ...                            <1>
+$ edit
+$ git checkout -b branch2                   <2>
+$ git reset --keep start                    <3>
+------------
++
+<1> This commits your first edits in branch1.
+<2> In the ideal world, you could have realized that the earlier
+    commit did not belong to the new topic when you created and switched
+    to branch2 (i.e. "git checkout -b branch2 start"), but nobody is
+    perfect.
+<3> But you can use "reset --keep" to remove the unwanted commit after
+    you switched to "branch2".
+
 Author
 ------
 Written by Junio C Hamano <gitster@pobox.com> and Linus Torvalds <torvalds@osdl.org>
diff --git a/Documentation/git-rev-parse.txt b/Documentation/git-rev-parse.txt
index 1a613aa10..8db600f6b 100644
--- a/Documentation/git-rev-parse.txt
+++ b/Documentation/git-rev-parse.txt
@@ -148,6 +148,12 @@ shown.  If the pattern does not contain a globbing character (`?`,
 --is-bare-repository::
 	When the repository is bare print "true", otherwise "false".
 
+--local-env-vars::
+	List the GIT_* environment variables that are local to the
+	repository (e.g. GIT_DIR or GIT_WORK_TREE, but not GIT_EDITOR).
+	Only the names of the variables are listed, not their value,
+	even if they are set.
+
 --short::
 --short=number::
 	Instead of outputting the full SHA1 values of object names try to
diff --git a/Documentation/git-show-branch.txt b/Documentation/git-show-branch.txt
index b9c4154e7..f1499bba8 100644
--- a/Documentation/git-show-branch.txt
+++ b/Documentation/git-show-branch.txt
@@ -9,7 +9,7 @@ SYNOPSIS
 --------
 [verse]
 'git show-branch' [-a|--all] [-r|--remotes] [--topo-order | --date-order]
-		[--current] [--color | --no-color] [--sparse]
+		[--current] [--color[=<when>] | --no-color] [--sparse]
 		[--more=<n> | --list | --independent | --merge-base]
 		[--no-name | --sha1-name] [--topics]
 		[<rev> | <glob>]...
@@ -117,13 +117,15 @@ OPTIONS
 	When no explicit <ref> parameter is given, it defaults to the
 	current branch (or `HEAD` if it is detached).
 
---color::
+--color[=<when>]::
 	Color the status sign (one of these: `*` `!` `+` `-`) of each commit
 	corresponding to the branch it's in.
+	The value must be always (the default), never, or auto.
 
 --no-color::
 	Turn off colored output, even when the configuration file gives the
 	default to color output.
+	Same as `--color=never`.
 
 Note that --more, --list, --independent and --merge-base options
 are mutually exclusive.
diff --git a/Documentation/git-var.txt b/Documentation/git-var.txt
index bb981822a..458f3e275 100644
--- a/Documentation/git-var.txt
+++ b/Documentation/git-var.txt
@@ -8,7 +8,7 @@ git-var - Show a git logical variable
 
 SYNOPSIS
 --------
-'git var' [ -l | <variable> ]
+'git var' ( -l | <variable> )
 
 DESCRIPTION
 -----------
diff --git a/Documentation/git.txt b/Documentation/git.txt
index cc32ce18d..35c0c7983 100644
--- a/Documentation/git.txt
+++ b/Documentation/git.txt
@@ -43,9 +43,10 @@ unreleased) version of git, that is available from 'master'
 branch of the `git.git` repository.
 Documentation for older releases are available here:
 
-* link:v1.7.0.1/git.html[documentation for release 1.7.0.1]
+* link:v1.7.0.2/git.html[documentation for release 1.7.0.2]
 
 * release notes for
+  link:RelNotes-1.7.0.2.txt[1.7.0.2],
   link:RelNotes-1.7.0.1.txt[1.7.0.1],
   link:RelNotes-1.7.0.txt[1.7.0].
 
@@ -230,7 +231,10 @@ help ...`.
 
 -p::
 --paginate::
-	Pipe all output into 'less' (or if set, $PAGER).
+	Pipe all output into 'less' (or if set, $PAGER) if standard
+	output is a terminal.  This overrides the `pager.<cmd>`
+	configuration options (see the "Configuration Mechanism" section
+	below).
 
 --no-pager::
 	Do not pipe git output into a pager.
@@ -402,7 +406,8 @@ people.  Here is an example:
 ------------
 
 Various commands read from the configuration file and adjust
-their operation accordingly.
+their operation accordingly.  See linkgit:git-config[1] for a
+list.
 
 
 Identifier Terminology
diff --git a/Documentation/merge-options.txt b/Documentation/merge-options.txt
index 3b83dba1a..37ce9a17f 100644
--- a/Documentation/merge-options.txt
+++ b/Documentation/merge-options.txt
@@ -67,6 +67,7 @@ option can be used to override --squash.
 	Synonyms to --stat and --no-stat; these are deprecated and will be
 	removed in the future.
 
+ifndef::git-pull[]
 -q::
 --quiet::
 	Operate quietly.
@@ -74,6 +75,7 @@ option can be used to override --squash.
 -v::
 --verbose::
 	Be verbose.
+endif::git-pull[]
 
 -X <option>::
 --strategy-option=<option>::
diff --git a/Documentation/technical/api-parse-options.txt b/Documentation/technical/api-parse-options.txt
index 50f9e9ac1..312e3b2e2 100644
--- a/Documentation/technical/api-parse-options.txt
+++ b/Documentation/technical/api-parse-options.txt
@@ -115,6 +115,9 @@ There are some macros to easily define options:
 `OPT__ABBREV(&int_var)`::
 	Add `\--abbrev[=<n>]`.
 
+`OPT__COLOR(&int_var, description)`::
+	Add `\--color[=<when>]` and `--no-color`.
+
 `OPT__DRY_RUN(&int_var)`::
 	Add `-n, \--dry-run`.
 
@@ -183,6 +186,15 @@ There are some macros to easily define options:
 	arguments.  Short options that happen to be digits take
 	precedence over it.
 
+`OPT_COLOR_FLAG(short, long, &int_var, description)`::
+	Introduce an option that takes an optional argument that can
+	have one of three values: "always", "never", or "auto".  If the
+	argument is not given, it defaults to "always".  The `--no-` form
+	works like `--long=never`; it cannot take an argument.  If
+	"always", set `int_var` to 1; if "never", set `int_var` to 0; if
+	"auto", set `int_var` to 1 if stdout is a tty or a pager,
+	0 otherwise.
+
 
 The last element of the array must be `OPT_END()`.
 
diff --git a/GIT-VERSION-GEN b/GIT-VERSION-GEN
index 7f894fdd4..d968ff0fc 100755
--- a/GIT-VERSION-GEN
+++ b/GIT-VERSION-GEN
@@ -1,7 +1,7 @@
 #!/bin/sh
 
 GVF=GIT-VERSION-FILE
-DEF_VER=v1.7.0.1
+DEF_VER=v1.7.0.2
 
 LF='
 '
diff --git a/Makefile b/Makefile
index afedb54b4..3a6c6ea52 100644
--- a/Makefile
+++ b/Makefile
@@ -214,6 +214,13 @@ all::
 #   DEFAULT_EDITOR='~/bin/vi',
 #   DEFAULT_EDITOR='$GIT_FALLBACK_EDITOR',
 #   DEFAULT_EDITOR='"C:\Program Files\Vim\gvim.exe" --nofork'
+#
+# Define COMPUTE_HEADER_DEPENDENCIES if your compiler supports the -MMD option
+# and you want to avoid rebuilding objects when an unrelated header file
+# changes.
+#
+# Define CHECK_HEADER_DEPENDENCIES to check for problems in the hard-coded
+# dependency rules.
 
 GIT-VERSION-FILE: FORCE
 	@$(SHELL_PATH) ./GIT-VERSION-GEN
@@ -301,7 +308,7 @@ SPARSE_FLAGS = -D__BIG_ENDIAN__ -D__powerpc__
 # Those must not be GNU-specific; they are shared with perl/ which may
 # be built by a different compiler. (Note that this is an artifact now
 # but it still might be nice to keep that distinction.)
-BASIC_CFLAGS =
+BASIC_CFLAGS = -I.
 BASIC_LDFLAGS =
 
 # Guard against environment variables
@@ -309,14 +316,22 @@ BUILTIN_OBJS =
 BUILT_INS =
 COMPAT_CFLAGS =
 COMPAT_OBJS =
+EXTRA_CPPFLAGS =
 LIB_H =
 LIB_OBJS =
+PROGRAM_OBJS =
 PROGRAMS =
 SCRIPT_PERL =
 SCRIPT_PYTHON =
 SCRIPT_SH =
 SCRIPT_LIB =
-TEST_PROGRAMS =
+TEST_PROGRAMS_NEED_X =
+
+# Having this variable in your environment would break pipelines because
+# you cause "cd" to echo its destination to stdout.  It can also take
+# scripts to unexpected places.  If you like CDPATH, define it for your
+# interactive shell sessions without exporting it.
+unexport CDPATH
 
 SCRIPT_SH += git-am.sh
 SCRIPT_SH += git-bisect.sh
@@ -327,7 +342,6 @@ SCRIPT_SH += git-merge-octopus.sh
 SCRIPT_SH += git-merge-one-file.sh
 SCRIPT_SH += git-merge-resolve.sh
 SCRIPT_SH += git-mergetool.sh
-SCRIPT_SH += git-notes.sh
 SCRIPT_SH += git-pull.sh
 SCRIPT_SH += git-quiltimport.sh
 SCRIPT_SH += git-rebase--interactive.sh
@@ -362,16 +376,35 @@ EXTRA_PROGRAMS =
 
 # ... and all the rest that could be moved out of bindir to gitexecdir
 PROGRAMS += $(EXTRA_PROGRAMS)
-PROGRAMS += git-fast-import$X
-PROGRAMS += git-imap-send$X
-PROGRAMS += git-shell$X
-PROGRAMS += git-show-index$X
-PROGRAMS += git-upload-pack$X
-PROGRAMS += git-http-backend$X
+
+PROGRAM_OBJS += fast-import.o
+PROGRAM_OBJS += imap-send.o
+PROGRAM_OBJS += shell.o
+PROGRAM_OBJS += show-index.o
+PROGRAM_OBJS += upload-pack.o
+PROGRAM_OBJS += http-backend.o
+
+PROGRAMS += $(patsubst %.o,git-%$X,$(PROGRAM_OBJS))
+
+TEST_PROGRAMS_NEED_X += test-chmtime
+TEST_PROGRAMS_NEED_X += test-ctype
+TEST_PROGRAMS_NEED_X += test-date
+TEST_PROGRAMS_NEED_X += test-delta
+TEST_PROGRAMS_NEED_X += test-dump-cache-tree
+TEST_PROGRAMS_NEED_X += test-genrandom
+TEST_PROGRAMS_NEED_X += test-match-trees
+TEST_PROGRAMS_NEED_X += test-parse-options
+TEST_PROGRAMS_NEED_X += test-path-utils
+TEST_PROGRAMS_NEED_X += test-run-command
+TEST_PROGRAMS_NEED_X += test-sha1
+TEST_PROGRAMS_NEED_X += test-sigchain
+TEST_PROGRAMS_NEED_X += test-index-version
+
+TEST_PROGRAMS = $(patsubst %,%$X,$(TEST_PROGRAMS_NEED_X))
 
 # List built-in command $C whose implementation cmd_$C() is not in
-# builtin-$C.o but is linked in as part of some other command.
-BUILT_INS += $(patsubst builtin-%.o,git-%$X,$(BUILTIN_OBJS))
+# builtin/$C.o but is linked in as part of some other command.
+BUILT_INS += $(patsubst builtin/%.o,git-%$X,$(BUILTIN_OBJS))
 
 BUILT_INS += git-cherry$X
 BUILT_INS += git-cherry-pick$X
@@ -427,6 +460,7 @@ LIB_H += blob.h
 LIB_H += builtin.h
 LIB_H += cache.h
 LIB_H += cache-tree.h
+LIB_H += color.h
 LIB_H += commit.h
 LIB_H += compat/bswap.h
 LIB_H += compat/cygwin.h
@@ -438,6 +472,7 @@ LIB_H += delta.h
 LIB_H += diffcore.h
 LIB_H += diff.h
 LIB_H += dir.h
+LIB_H += exec_cmd.h
 LIB_H += fsck.h
 LIB_H += git-compat-util.h
 LIB_H += graph.h
@@ -480,7 +515,8 @@ LIB_H += tree-walk.h
 LIB_H += unpack-trees.h
 LIB_H += userdiff.h
 LIB_H += utf8.h
-LIB_H += wt-status.h
+LIB_H += xdiff-interface.h
+LIB_H += xdiff/xdiff.h
 
 LIB_OBJS += abspath.o
 LIB_OBJS += advice.o
@@ -594,95 +630,96 @@ LIB_OBJS += ws.o
 LIB_OBJS += wt-status.o
 LIB_OBJS += xdiff-interface.o
 
-BUILTIN_OBJS += builtin-add.o
-BUILTIN_OBJS += builtin-annotate.o
-BUILTIN_OBJS += builtin-apply.o
-BUILTIN_OBJS += builtin-archive.o
-BUILTIN_OBJS += builtin-bisect--helper.o
-BUILTIN_OBJS += builtin-blame.o
-BUILTIN_OBJS += builtin-branch.o
-BUILTIN_OBJS += builtin-bundle.o
-BUILTIN_OBJS += builtin-cat-file.o
-BUILTIN_OBJS += builtin-check-attr.o
-BUILTIN_OBJS += builtin-check-ref-format.o
-BUILTIN_OBJS += builtin-checkout-index.o
-BUILTIN_OBJS += builtin-checkout.o
-BUILTIN_OBJS += builtin-clean.o
-BUILTIN_OBJS += builtin-clone.o
-BUILTIN_OBJS += builtin-commit-tree.o
-BUILTIN_OBJS += builtin-commit.o
-BUILTIN_OBJS += builtin-config.o
-BUILTIN_OBJS += builtin-count-objects.o
-BUILTIN_OBJS += builtin-describe.o
-BUILTIN_OBJS += builtin-diff-files.o
-BUILTIN_OBJS += builtin-diff-index.o
-BUILTIN_OBJS += builtin-diff-tree.o
-BUILTIN_OBJS += builtin-diff.o
-BUILTIN_OBJS += builtin-fast-export.o
-BUILTIN_OBJS += builtin-fetch-pack.o
-BUILTIN_OBJS += builtin-fetch.o
-BUILTIN_OBJS += builtin-fmt-merge-msg.o
-BUILTIN_OBJS += builtin-for-each-ref.o
-BUILTIN_OBJS += builtin-fsck.o
-BUILTIN_OBJS += builtin-gc.o
-BUILTIN_OBJS += builtin-grep.o
-BUILTIN_OBJS += builtin-hash-object.o
-BUILTIN_OBJS += builtin-help.o
-BUILTIN_OBJS += builtin-index-pack.o
-BUILTIN_OBJS += builtin-init-db.o
-BUILTIN_OBJS += builtin-log.o
-BUILTIN_OBJS += builtin-ls-files.o
-BUILTIN_OBJS += builtin-ls-remote.o
-BUILTIN_OBJS += builtin-ls-tree.o
-BUILTIN_OBJS += builtin-mailinfo.o
-BUILTIN_OBJS += builtin-mailsplit.o
-BUILTIN_OBJS += builtin-merge.o
-BUILTIN_OBJS += builtin-merge-base.o
-BUILTIN_OBJS += builtin-merge-file.o
-BUILTIN_OBJS += builtin-merge-index.o
-BUILTIN_OBJS += builtin-merge-ours.o
-BUILTIN_OBJS += builtin-merge-recursive.o
-BUILTIN_OBJS += builtin-merge-tree.o
-BUILTIN_OBJS += builtin-mktag.o
-BUILTIN_OBJS += builtin-mktree.o
-BUILTIN_OBJS += builtin-mv.o
-BUILTIN_OBJS += builtin-name-rev.o
-BUILTIN_OBJS += builtin-pack-objects.o
-BUILTIN_OBJS += builtin-pack-redundant.o
-BUILTIN_OBJS += builtin-pack-refs.o
-BUILTIN_OBJS += builtin-patch-id.o
-BUILTIN_OBJS += builtin-prune-packed.o
-BUILTIN_OBJS += builtin-prune.o
-BUILTIN_OBJS += builtin-push.o
-BUILTIN_OBJS += builtin-read-tree.o
-BUILTIN_OBJS += builtin-receive-pack.o
-BUILTIN_OBJS += builtin-reflog.o
-BUILTIN_OBJS += builtin-remote.o
-BUILTIN_OBJS += builtin-replace.o
-BUILTIN_OBJS += builtin-rerere.o
-BUILTIN_OBJS += builtin-reset.o
-BUILTIN_OBJS += builtin-rev-list.o
-BUILTIN_OBJS += builtin-rev-parse.o
-BUILTIN_OBJS += builtin-revert.o
-BUILTIN_OBJS += builtin-rm.o
-BUILTIN_OBJS += builtin-send-pack.o
-BUILTIN_OBJS += builtin-shortlog.o
-BUILTIN_OBJS += builtin-show-branch.o
-BUILTIN_OBJS += builtin-show-ref.o
-BUILTIN_OBJS += builtin-stripspace.o
-BUILTIN_OBJS += builtin-symbolic-ref.o
-BUILTIN_OBJS += builtin-tag.o
-BUILTIN_OBJS += builtin-tar-tree.o
-BUILTIN_OBJS += builtin-unpack-file.o
-BUILTIN_OBJS += builtin-unpack-objects.o
-BUILTIN_OBJS += builtin-update-index.o
-BUILTIN_OBJS += builtin-update-ref.o
-BUILTIN_OBJS += builtin-update-server-info.o
-BUILTIN_OBJS += builtin-upload-archive.o
-BUILTIN_OBJS += builtin-var.o
-BUILTIN_OBJS += builtin-verify-pack.o
-BUILTIN_OBJS += builtin-verify-tag.o
-BUILTIN_OBJS += builtin-write-tree.o
+BUILTIN_OBJS += builtin/add.o
+BUILTIN_OBJS += builtin/annotate.o
+BUILTIN_OBJS += builtin/apply.o
+BUILTIN_OBJS += builtin/archive.o
+BUILTIN_OBJS += builtin/bisect--helper.o
+BUILTIN_OBJS += builtin/blame.o
+BUILTIN_OBJS += builtin/branch.o
+BUILTIN_OBJS += builtin/bundle.o
+BUILTIN_OBJS += builtin/cat-file.o
+BUILTIN_OBJS += builtin/check-attr.o
+BUILTIN_OBJS += builtin/check-ref-format.o
+BUILTIN_OBJS += builtin/checkout-index.o
+BUILTIN_OBJS += builtin/checkout.o
+BUILTIN_OBJS += builtin/clean.o
+BUILTIN_OBJS += builtin/clone.o
+BUILTIN_OBJS += builtin/commit-tree.o
+BUILTIN_OBJS += builtin/commit.o
+BUILTIN_OBJS += builtin/config.o
+BUILTIN_OBJS += builtin/count-objects.o
+BUILTIN_OBJS += builtin/describe.o
+BUILTIN_OBJS += builtin/diff-files.o
+BUILTIN_OBJS += builtin/diff-index.o
+BUILTIN_OBJS += builtin/diff-tree.o
+BUILTIN_OBJS += builtin/diff.o
+BUILTIN_OBJS += builtin/fast-export.o
+BUILTIN_OBJS += builtin/fetch-pack.o
+BUILTIN_OBJS += builtin/fetch.o
+BUILTIN_OBJS += builtin/fmt-merge-msg.o
+BUILTIN_OBJS += builtin/for-each-ref.o
+BUILTIN_OBJS += builtin/fsck.o
+BUILTIN_OBJS += builtin/gc.o
+BUILTIN_OBJS += builtin/grep.o
+BUILTIN_OBJS += builtin/hash-object.o
+BUILTIN_OBJS += builtin/help.o
+BUILTIN_OBJS += builtin/index-pack.o
+BUILTIN_OBJS += builtin/init-db.o
+BUILTIN_OBJS += builtin/log.o
+BUILTIN_OBJS += builtin/ls-files.o
+BUILTIN_OBJS += builtin/ls-remote.o
+BUILTIN_OBJS += builtin/ls-tree.o
+BUILTIN_OBJS += builtin/mailinfo.o
+BUILTIN_OBJS += builtin/mailsplit.o
+BUILTIN_OBJS += builtin/merge.o
+BUILTIN_OBJS += builtin/merge-base.o
+BUILTIN_OBJS += builtin/merge-file.o
+BUILTIN_OBJS += builtin/merge-index.o
+BUILTIN_OBJS += builtin/merge-ours.o
+BUILTIN_OBJS += builtin/merge-recursive.o
+BUILTIN_OBJS += builtin/merge-tree.o
+BUILTIN_OBJS += builtin/mktag.o
+BUILTIN_OBJS += builtin/mktree.o
+BUILTIN_OBJS += builtin/mv.o
+BUILTIN_OBJS += builtin/name-rev.o
+BUILTIN_OBJS += builtin/notes.o
+BUILTIN_OBJS += builtin/pack-objects.o
+BUILTIN_OBJS += builtin/pack-redundant.o
+BUILTIN_OBJS += builtin/pack-refs.o
+BUILTIN_OBJS += builtin/patch-id.o
+BUILTIN_OBJS += builtin/prune-packed.o
+BUILTIN_OBJS += builtin/prune.o
+BUILTIN_OBJS += builtin/push.o
+BUILTIN_OBJS += builtin/read-tree.o
+BUILTIN_OBJS += builtin/receive-pack.o
+BUILTIN_OBJS += builtin/reflog.o
+BUILTIN_OBJS += builtin/remote.o
+BUILTIN_OBJS += builtin/replace.o
+BUILTIN_OBJS += builtin/rerere.o
+BUILTIN_OBJS += builtin/reset.o
+BUILTIN_OBJS += builtin/rev-list.o
+BUILTIN_OBJS += builtin/rev-parse.o
+BUILTIN_OBJS += builtin/revert.o
+BUILTIN_OBJS += builtin/rm.o
+BUILTIN_OBJS += builtin/send-pack.o
+BUILTIN_OBJS += builtin/shortlog.o
+BUILTIN_OBJS += builtin/show-branch.o
+BUILTIN_OBJS += builtin/show-ref.o
+BUILTIN_OBJS += builtin/stripspace.o
+BUILTIN_OBJS += builtin/symbolic-ref.o
+BUILTIN_OBJS += builtin/tag.o
+BUILTIN_OBJS += builtin/tar-tree.o
+BUILTIN_OBJS += builtin/unpack-file.o
+BUILTIN_OBJS += builtin/unpack-objects.o
+BUILTIN_OBJS += builtin/update-index.o
+BUILTIN_OBJS += builtin/update-ref.o
+BUILTIN_OBJS += builtin/update-server-info.o
+BUILTIN_OBJS += builtin/upload-archive.o
+BUILTIN_OBJS += builtin/var.o
+BUILTIN_OBJS += builtin/verify-pack.o
+BUILTIN_OBJS += builtin/verify-tag.o
+BUILTIN_OBJS += builtin/write-tree.o
 
 GITLIBS = $(LIB_FILE) $(XDIFF_LIB)
 EXTLIBS =
@@ -1022,6 +1059,14 @@ endif
 -include config.mak.autogen
 -include config.mak
 
+ifdef CHECK_HEADER_DEPENDENCIES
+USE_COMPUTED_HEADER_DEPENDENCIES =
+endif
+
+ifdef COMPUTE_HEADER_DEPENDENCIES
+USE_COMPUTED_HEADER_DEPENDENCIES = YesPlease
+endif
+
 ifdef SANE_TOOL_PATH
 SANE_TOOL_PATH_SQ = $(subst ','\'',$(SANE_TOOL_PATH))
 BROKEN_PATH_FIX = 's|^\# @@BROKEN_PATH_FIX@@$$|git_broken_path_fix $(SANE_TOOL_PATH_SQ)|'
@@ -1077,11 +1122,12 @@ else
 	REMOTE_CURL_PRIMARY = git-remote-http$X
 	REMOTE_CURL_ALIASES = git-remote-https$X git-remote-ftp$X git-remote-ftps$X
 	REMOTE_CURL_NAMES = $(REMOTE_CURL_PRIMARY) $(REMOTE_CURL_ALIASES)
-	PROGRAMS += $(REMOTE_CURL_NAMES) git-http-fetch$X
+	PROGRAM_OBJS += http-fetch.o
+	PROGRAMS += $(REMOTE_CURL_NAMES)
 	curl_check := $(shell (echo 070908; curl-config --vernum) | sort -r | sed -ne 2p)
 	ifeq "$(curl_check)" "070908"
 		ifndef NO_EXPAT
-			PROGRAMS += git-http-push$X
+			PROGRAM_OBJS += http-push.o
 		endif
 	endif
 	ifndef NO_EXPAT
@@ -1101,7 +1147,7 @@ endif
 EXTLIBS += -lz
 
 ifndef NO_POSIX_ONLY_PROGRAMS
-	PROGRAMS += git-daemon$X
+	PROGRAM_OBJS += daemon.o
 endif
 ifndef NO_OPENSSL
 	OPENSSL_LIBSSL = -lssl
@@ -1202,7 +1248,6 @@ ifdef NO_MKDTEMP
 endif
 ifdef NO_MKSTEMPS
 	COMPAT_CFLAGS += -DNO_MKSTEMPS
-	COMPAT_OBJS += compat/mkstemps.o
 endif
 ifdef NO_UNSETENV
 	COMPAT_CFLAGS += -DNO_UNSETENV
@@ -1268,10 +1313,12 @@ endif
 ifdef BLK_SHA1
 	SHA1_HEADER = "block-sha1/sha1.h"
 	LIB_OBJS += block-sha1/sha1.o
+	LIB_H += block-sha1/sha1.h
 else
 ifdef PPC_SHA1
 	SHA1_HEADER = "ppc/sha1.h"
 	LIB_OBJS += ppc/sha1.o ppc/sha1ppc.o
+	LIB_H += ppc/sha1.h
 else
 	SHA1_HEADER = <openssl/sha.h>
 	EXTLIBS += $(LIB_4_CRYPTO)
@@ -1440,15 +1487,15 @@ strip: $(PROGRAMS) git$X
 	$(STRIP) $(STRIP_OPTS) $(PROGRAMS) git$X
 
 git.o: common-cmds.h
-git.s git.o: ALL_CFLAGS += -DGIT_VERSION='"$(GIT_VERSION)"' \
+git.s git.o: EXTRA_CPPFLAGS = -DGIT_VERSION='"$(GIT_VERSION)"' \
 	'-DGIT_HTML_PATH="$(htmldir_SQ)"'
 
 git$X: git.o $(BUILTIN_OBJS) $(GITLIBS)
 	$(QUIET_LINK)$(CC) $(ALL_CFLAGS) -o $@ git.o \
 		$(BUILTIN_OBJS) $(ALL_LDFLAGS) $(LIBS)
 
-builtin-help.o: common-cmds.h
-builtin-help.s builtin-help.o: ALL_CFLAGS += \
+builtin/help.o: common-cmds.h
+builtin/help.s builtin/help.o: EXTRA_CPPFLAGS = \
 	'-DGIT_HTML_PATH="$(htmldir_SQ)"' \
 	'-DGIT_MAN_PATH="$(mandir_SQ)"' \
 	'-DGIT_INFO_PATH="$(infodir_SQ)"'
@@ -1592,28 +1639,148 @@ git.o git.spec \
 	$(patsubst %.perl,%,$(SCRIPT_PERL)) \
 	: GIT-VERSION-FILE
 
-%.o: %.c GIT-CFLAGS
-	$(QUIET_CC)$(CC) -o $*.o -c $(ALL_CFLAGS) $<
+TEST_OBJS := $(patsubst test-%$X,test-%.o,$(TEST_PROGRAMS))
+GIT_OBJS := $(LIB_OBJS) $(BUILTIN_OBJS) $(PROGRAM_OBJS) $(TEST_OBJS) \
+	git.o http.o http-walker.o remote-curl.o
+XDIFF_OBJS = xdiff/xdiffi.o xdiff/xprepare.o xdiff/xutils.o xdiff/xemit.o \
+	xdiff/xmerge.o xdiff/xpatience.o
+OBJECTS := $(GIT_OBJS) $(XDIFF_OBJS)
+
+dep_files := $(foreach f,$(OBJECTS),$(dir $f).depend/$(notdir $f).d)
+dep_dirs := $(addsuffix .depend,$(sort $(dir $(OBJECTS))))
+
+ifdef COMPUTE_HEADER_DEPENDENCIES
+$(dep_dirs):
+	mkdir -p $@
+
+missing_dep_dirs := $(filter-out $(wildcard $(dep_dirs)),$(dep_dirs))
+dep_file = $(dir $@).depend/$(notdir $@).d
+dep_args = -MF $(dep_file) -MMD -MP
+ifdef CHECK_HEADER_DEPENDENCIES
+$(error cannot compute header dependencies outside a normal build. \
+Please unset CHECK_HEADER_DEPENDENCIES and try again)
+endif
+endif
+
+ifndef COMPUTE_HEADER_DEPENDENCIES
+ifndef CHECK_HEADER_DEPENDENCIES
+dep_dirs =
+missing_dep_dirs =
+dep_args =
+endif
+endif
+
+ifdef CHECK_HEADER_DEPENDENCIES
+ifndef PRINT_HEADER_DEPENDENCIES
+missing_deps = $(filter-out $(notdir $^), \
+	$(notdir $(shell $(MAKE) -s $@ \
+		CHECK_HEADER_DEPENDENCIES=YesPlease \
+		USE_COMPUTED_HEADER_DEPENDENCIES=YesPlease \
+		PRINT_HEADER_DEPENDENCIES=YesPlease)))
+endif
+endif
+
+ASM_SRC := $(wildcard $(OBJECTS:o=S))
+ASM_OBJ := $(ASM_SRC:S=o)
+C_OBJ := $(filter-out $(ASM_OBJ),$(OBJECTS))
+
+.SUFFIXES:
+
+ifdef PRINT_HEADER_DEPENDENCIES
+$(C_OBJ): %.o: %.c FORCE
+	echo $^
+$(ASM_OBJ): %.o: %.S FORCE
+	echo $^
+
+ifndef CHECK_HEADER_DEPENDENCIES
+$(error cannot print header dependencies during a normal build. \
+Please set CHECK_HEADER_DEPENDENCIES and try again)
+endif
+endif
+
+ifndef PRINT_HEADER_DEPENDENCIES
+ifdef CHECK_HEADER_DEPENDENCIES
+$(C_OBJ): %.o: %.c $(dep_files) FORCE
+	@set -e; echo CHECK $@; \
+	missing_deps="$(missing_deps)"; \
+	if test "$$missing_deps"; \
+	then \
+		echo missing dependencies: $$missing_deps; \
+		false; \
+	fi
+$(ASM_OBJ): %.o: %.S $(dep_files) FORCE
+	@set -e; echo CHECK $@; \
+	missing_deps="$(missing_deps)"; \
+	if test "$$missing_deps"; \
+	then \
+		echo missing dependencies: $$missing_deps; \
+		false; \
+	fi
+endif
+endif
+
+ifndef CHECK_HEADER_DEPENDENCIES
+$(C_OBJ): %.o: %.c GIT-CFLAGS $(missing_dep_dirs)
+	$(QUIET_CC)$(CC) -o $*.o -c $(dep_args) $(ALL_CFLAGS) $(EXTRA_CPPFLAGS) $<
+$(ASM_OBJ): %.o: %.S GIT-CFLAGS $(missing_dep_dirs)
+	$(QUIET_CC)$(CC) -o $*.o -c $(dep_args) $(ALL_CFLAGS) $(EXTRA_CPPFLAGS) $<
+endif
+
 %.s: %.c GIT-CFLAGS FORCE
-	$(QUIET_CC)$(CC) -S $(ALL_CFLAGS) $<
-%.o: %.S GIT-CFLAGS
-	$(QUIET_CC)$(CC) -o $*.o -c $(ALL_CFLAGS) $<
+	$(QUIET_CC)$(CC) -S $(ALL_CFLAGS) $(EXTRA_CPPFLAGS) $<
 
-exec_cmd.s exec_cmd.o: ALL_CFLAGS += \
+ifdef USE_COMPUTED_HEADER_DEPENDENCIES
+# Take advantage of gcc's on-the-fly dependency generation
+# See <http://gcc.gnu.org/gcc-3.0/features.html>.
+dep_files_present := $(wildcard $(dep_files))
+ifneq ($(dep_files_present),)
+include $(dep_files_present)
+endif
+else
+# Dependencies on header files, for platforms that do not support
+# the gcc -MMD option.
+#
+# Dependencies on automatically generated headers such as common-cmds.h
+# should _not_ be included here, since they are necessary even when
+# building an object for the first time.
+#
+# XXX. Please check occasionally that these include all dependencies
+# gcc detects!
+
+$(GIT_OBJS): $(LIB_H)
+builtin/branch.o builtin/checkout.o builtin/clone.o builtin/reset.o branch.o transport.o: branch.h
+builtin/bundle.o bundle.o transport.o: bundle.h
+builtin/bisect--helper.o builtin/rev-list.o bisect.o: bisect.h
+builtin/clone.o builtin/fetch-pack.o transport.o: fetch-pack.h
+builtin/grep.o: thread-utils.h
+builtin/send-pack.o transport.o: send-pack.h
+builtin/log.o builtin/shortlog.o: shortlog.h
+builtin/prune.o builtin/reflog.o reachable.o: reachable.h
+builtin/commit.o builtin/revert.o wt-status.o: wt-status.h
+builtin/tar-tree.o archive-tar.o: tar.h
+builtin/pack-objects.o: thread-utils.h
+http-fetch.o http-walker.o remote-curl.o transport.o walker.o: walker.h
+http.o http-walker.o http-push.o remote-curl.o: http.h
+
+xdiff-interface.o $(XDIFF_OBJS): \
+	xdiff/xinclude.h xdiff/xmacros.h xdiff/xdiff.h xdiff/xtypes.h \
+	xdiff/xutils.h xdiff/xprepare.h xdiff/xdiffi.h xdiff/xemit.h
+endif
+
+exec_cmd.s exec_cmd.o: EXTRA_CPPFLAGS = \
 	'-DGIT_EXEC_PATH="$(gitexecdir_SQ)"' \
 	'-DBINDIR="$(bindir_relative_SQ)"' \
 	'-DPREFIX="$(prefix_SQ)"'
 
-builtin-init-db.s builtin-init-db.o: ALL_CFLAGS += \
+builtin/init-db.s builtin/init-db.o: EXTRA_CPPFLAGS = \
 	-DDEFAULT_GIT_TEMPLATE_DIR='"$(template_dir_SQ)"'
 
-config.s config.o: ALL_CFLAGS += -DETC_GITCONFIG='"$(ETC_GITCONFIG_SQ)"'
+config.s config.o: EXTRA_CPPFLAGS = -DETC_GITCONFIG='"$(ETC_GITCONFIG_SQ)"'
 
-http.s http.o: ALL_CFLAGS += -DGIT_USER_AGENT='"git/$(GIT_VERSION)"'
+http.s http.o: EXTRA_CPPFLAGS = -DGIT_USER_AGENT='"git/$(GIT_VERSION)"'
 
 ifdef NO_EXPAT
-http-walker.o: http.h
-http-walker.s http-walker.o: ALL_CFLAGS += -DNO_EXPAT
+http-walker.s http-walker.o: EXTRA_CPPFLAGS = -DNO_EXPAT
 endif
 
 git-%$X: %.o $(GITLIBS)
@@ -1623,10 +1790,6 @@ git-imap-send$X: imap-send.o $(GITLIBS)
 	$(QUIET_LINK)$(CC) $(ALL_CFLAGS) -o $@ $(ALL_LDFLAGS) $(filter %.o,$^) \
 		$(LIBS) $(OPENSSL_LINK) $(OPENSSL_LIBSSL)
 
-http.o http-walker.o http-push.o: http.h
-
-http.o http-walker.o: $(LIB_H)
-
 git-http-fetch$X: revision.o http.o http-walker.o http-fetch.o $(GITLIBS)
 	$(QUIET_LINK)$(CC) $(ALL_CFLAGS) -o $@ $(ALL_LDFLAGS) $(filter %.o,$^) \
 		$(LIBS) $(CURL_LIBCURL)
@@ -1644,18 +1807,9 @@ $(REMOTE_CURL_PRIMARY): remote-curl.o http.o http-walker.o $(GITLIBS)
 	$(QUIET_LINK)$(CC) $(ALL_CFLAGS) -o $@ $(ALL_LDFLAGS) $(filter %.o,$^) \
 		$(LIBS) $(CURL_LIBCURL) $(EXPAT_LIBEXPAT)
 
-$(LIB_OBJS) $(BUILTIN_OBJS): $(LIB_H)
-$(patsubst git-%$X,%.o,$(PROGRAMS)) git.o: $(LIB_H) $(wildcard */*.h)
-builtin-revert.o wt-status.o: wt-status.h
-
 $(LIB_FILE): $(LIB_OBJS)
 	$(QUIET_AR)$(RM) $@ && $(AR) rcs $@ $(LIB_OBJS)
 
-XDIFF_OBJS=xdiff/xdiffi.o xdiff/xprepare.o xdiff/xutils.o xdiff/xemit.o \
-	xdiff/xmerge.o xdiff/xpatience.o
-$(XDIFF_OBJS): xdiff/xinclude.h xdiff/xmacros.h xdiff/xdiff.h xdiff/xtypes.h \
-	xdiff/xutils.h xdiff/xprepare.h xdiff/xdiffi.h xdiff/xemit.h
-
 $(XDIFF_LIB): $(XDIFF_OBJS)
 	$(QUIET_AR)$(RM) $@ && $(AR) rcs $@ $(XDIFF_OBJS)
 
@@ -1721,24 +1875,6 @@ GIT-GUI-VARS: FORCE
             fi
 endif
 
-### Testing rules
-
-TEST_PROGRAMS_NEED_X += test-chmtime
-TEST_PROGRAMS_NEED_X += test-ctype
-TEST_PROGRAMS_NEED_X += test-date
-TEST_PROGRAMS_NEED_X += test-delta
-TEST_PROGRAMS_NEED_X += test-dump-cache-tree
-TEST_PROGRAMS_NEED_X += test-genrandom
-TEST_PROGRAMS_NEED_X += test-match-trees
-TEST_PROGRAMS_NEED_X += test-parse-options
-TEST_PROGRAMS_NEED_X += test-path-utils
-TEST_PROGRAMS_NEED_X += test-run-command
-TEST_PROGRAMS_NEED_X += test-sha1
-TEST_PROGRAMS_NEED_X += test-sigchain
-TEST_PROGRAMS_NEED_X += test-index-version
-
-TEST_PROGRAMS = $(patsubst %,%$X,$(TEST_PROGRAMS_NEED_X))
-
 test_bindir_programs := $(patsubst %,bin-wrappers/%,$(BINDIR_PROGRAMS_NEED_X) $(BINDIR_PROGRAMS_NO_X) $(TEST_PROGRAMS_NEED_X))
 
 all:: $(TEST_PROGRAMS) $(test_bindir_programs)
@@ -1756,6 +1892,8 @@ bin-wrappers/%: wrap-for-bin.sh
 
 export NO_SVN_TESTS
 
+### Testing rules
+
 test: all
 	$(MAKE) -C t/ all
 
@@ -1767,9 +1905,7 @@ test-delta$X: diff-delta.o patch-delta.o
 
 test-parse-options$X: parse-options.o
 
-test-parse-options.o: parse-options.h
-
-.PRECIOUS: $(patsubst test-%$X,test-%.o,$(TEST_PROGRAMS))
+.PRECIOUS: $(TEST_OBJS)
 
 test-%$X: test-%.o $(GITLIBS)
 	$(QUIET_LINK)$(CC) $(ALL_CFLAGS) -o $@ $(ALL_LDFLAGS) $(filter %.o,$^) $(LIBS)
@@ -1934,10 +2070,11 @@ distclean: clean
 
 clean:
 	$(RM) *.o block-sha1/*.o ppc/*.o compat/*.o compat/*/*.o xdiff/*.o \
-		$(LIB_FILE) $(XDIFF_LIB)
+		builtin/*.o $(LIB_FILE) $(XDIFF_LIB)
 	$(RM) $(ALL_PROGRAMS) $(SCRIPT_LIB) $(BUILT_INS) git$X
 	$(RM) $(TEST_PROGRAMS)
 	$(RM) -r bin-wrappers
+	$(RM) -r $(dep_dirs)
 	$(RM) *.spec *.pyc *.pyo */*.pyc */*.pyo common-cmds.h TAGS tags cscope*
 	$(RM) -r autom4te.cache
 	$(RM) config.log config.mak.autogen config.mak.append config.status config.cache
@@ -1973,6 +2110,7 @@ check-docs::
 		git-merge-octopus | git-merge-ours | git-merge-recursive | \
 		git-merge-resolve | git-merge-subtree | \
 		git-fsck-objects | git-init-db | \
+		git-remote-* | git-stage | \
 		git-?*--?* ) continue ;; \
 		esac ; \
 		test -f "Documentation/$$v.txt" || \
@@ -2011,7 +2149,7 @@ check-docs::
 		documented,gittutorial | \
 		documented,gittutorial-2 | \
 		documented,git-bisect-lk2009 | \
-		documented.git-remote-helpers | \
+		documented,git-remote-helpers | \
 		documented,gitworkflows | \
 		sentinel,not,matching,is,ok ) continue ;; \
 		esac; \
diff --git a/abspath.c b/abspath.c
index b88122cbe..c91a29cb2 100644
--- a/abspath.c
+++ b/abspath.c
@@ -54,8 +54,9 @@ const char *make_absolute_path(const char *path)
 			if (len + strlen(last_elem) + 2 > PATH_MAX)
 				die ("Too long path name: '%s/%s'",
 						buf, last_elem);
-			buf[len] = '/';
-			strcpy(buf + len + 1, last_elem);
+			if (len && buf[len-1] != '/')
+				buf[len++] = '/';
+			strcpy(buf + len, last_elem);
 			free(last_elem);
 			last_elem = NULL;
 		}
diff --git a/bisect.c b/bisect.c
index 6dc27ee7a..b556b1161 100644
--- a/bisect.c
+++ b/bisect.c
@@ -986,6 +986,12 @@ int bisect_next_all(const char *prefix)
 		exit(1);
 	}
 
+	if (!all) {
+		fprintf(stderr, "No testable commit found.\n"
+			"Maybe you started with bad path parameters?\n");
+		exit(4);
+	}
+
 	bisect_rev = revs.commits->item->object.sha1;
 	memcpy(bisect_rev_hex, sha1_to_hex(bisect_rev), 41);
 
diff --git a/builtin.h b/builtin.h
index e8202f3f5..cdf98477a 100644
--- a/builtin.h
+++ b/builtin.h
@@ -5,6 +5,7 @@
 #include "strbuf.h"
 #include "cache.h"
 #include "commit.h"
+#include "notes.h"
 
 extern const char git_version_string[];
 extern const char git_usage_string[];
@@ -18,6 +19,7 @@ extern int fmt_merge_msg(int merge_summary, struct strbuf *in,
 extern int commit_tree(const char *msg, unsigned char *tree,
 		struct commit_list *parents, unsigned char *ret,
 		const char *author);
+extern int commit_notes(struct notes_tree *t, const char *msg);
 extern int check_pager_config(const char *cmd);
 
 extern int cmd_add(int argc, const char **argv, const char *prefix);
@@ -78,6 +80,7 @@ extern int cmd_mktag(int argc, const char **argv, const char *prefix);
 extern int cmd_mktree(int argc, const char **argv, const char *prefix);
 extern int cmd_mv(int argc, const char **argv, const char *prefix);
 extern int cmd_name_rev(int argc, const char **argv, const char *prefix);
+extern int cmd_notes(int argc, const char **argv, const char *prefix);
 extern int cmd_pack_objects(int argc, const char **argv, const char *prefix);
 extern int cmd_pack_redundant(int argc, const char **argv, const char *prefix);
 extern int cmd_patch_id(int argc, const char **argv, const char *prefix);
diff --git a/builtin-add.c b/builtin/add.c
index 2705f8d05..87d298031 100644
--- a/builtin-add.c
+++ b/builtin/add.c
@@ -117,7 +117,19 @@ static void fill_pathspec_matches(const char **pathspec, char *seen, int specs)
 	}
 }
 
-static void prune_directory(struct dir_struct *dir, const char **pathspec, int prefix)
+static char *find_used_pathspec(const char **pathspec)
+{
+	char *seen;
+	int i;
+
+	for (i = 0; pathspec[i];  i++)
+		; /* just counting */
+	seen = xcalloc(i, 1);
+	fill_pathspec_matches(pathspec, seen, i);
+	return seen;
+}
+
+static char *prune_directory(struct dir_struct *dir, const char **pathspec, int prefix)
 {
 	char *seen;
 	int i, specs;
@@ -137,13 +149,7 @@ static void prune_directory(struct dir_struct *dir, const char **pathspec, int p
 	}
 	dir->nr = dst - dir->entries;
 	fill_pathspec_matches(pathspec, seen, specs);
-
-	for (i = 0; i < specs; i++) {
-		if (!seen[i] && pathspec[i][0] && !file_exists(pathspec[i]))
-			die("pathspec '%s' did not match any files",
-					pathspec[i]);
-	}
-        free(seen);
+	return seen;
 }
 
 static void treat_gitlinks(const char **pathspec)
@@ -359,6 +365,7 @@ int cmd_add(int argc, const char **argv, const char *prefix)
 	int flags;
 	int add_new_files;
 	int require_pathspec;
+	char *seen = NULL;
 
 	git_config(add_config, NULL);
 
@@ -418,7 +425,7 @@ int cmd_add(int argc, const char **argv, const char *prefix)
 		/* This picks up the paths that are not tracked */
 		baselen = fill_directory(&dir, pathspec);
 		if (pathspec)
-			prune_directory(&dir, pathspec, baselen);
+			seen = prune_directory(&dir, pathspec, baselen);
 	}
 
 	if (refresh_only) {
@@ -426,6 +433,19 @@ int cmd_add(int argc, const char **argv, const char *prefix)
 		goto finish;
 	}
 
+	if (pathspec) {
+		int i;
+		if (!seen)
+			seen = find_used_pathspec(pathspec);
+		for (i = 0; pathspec[i]; i++) {
+			if (!seen[i] && pathspec[i][0]
+			    && !file_exists(pathspec[i]))
+				die("pathspec '%s' did not match any files",
+				    pathspec[i]);
+		}
+		free(seen);
+	}
+
 	exit_status |= add_files_to_cache(prefix, pathspec, flags);
 
 	if (add_new_files)
diff --git a/builtin-annotate.c b/builtin/annotate.c
index fc43eed36..fc43eed36 100644
--- a/builtin-annotate.c
+++ b/builtin/annotate.c
diff --git a/builtin-apply.c b/builtin/apply.c
index 3af4ae0c2..7ca90472c 100644
--- a/builtin-apply.c
+++ b/builtin/apply.c
@@ -1854,33 +1854,76 @@ static int match_fragment(struct image *img,
 {
 	int i;
 	char *fixed_buf, *buf, *orig, *target;
+	int preimage_limit;
 
-	if (preimage->nr + try_lno > img->nr)
+	if (preimage->nr + try_lno <= img->nr) {
+		/*
+		 * The hunk falls within the boundaries of img.
+		 */
+		preimage_limit = preimage->nr;
+		if (match_end && (preimage->nr + try_lno != img->nr))
+			return 0;
+	} else if (ws_error_action == correct_ws_error &&
+		   (ws_rule & WS_BLANK_AT_EOF) && match_end) {
+		/*
+		 * This hunk that matches at the end extends beyond
+		 * the end of img, and we are removing blank lines
+		 * at the end of the file.  This many lines from the
+		 * beginning of the preimage must match with img, and
+		 * the remainder of the preimage must be blank.
+		 */
+		preimage_limit = img->nr - try_lno;
+	} else {
+		/*
+		 * The hunk extends beyond the end of the img and
+		 * we are not removing blanks at the end, so we
+		 * should reject the hunk at this position.
+		 */
 		return 0;
+	}
 
 	if (match_beginning && try_lno)
 		return 0;
 
-	if (match_end && preimage->nr + try_lno != img->nr)
-		return 0;
-
 	/* Quick hash check */
-	for (i = 0; i < preimage->nr; i++)
+	for (i = 0; i < preimage_limit; i++)
 		if (preimage->line[i].hash != img->line[try_lno + i].hash)
 			return 0;
 
-	/*
-	 * Do we have an exact match?  If we were told to match
-	 * at the end, size must be exactly at try+fragsize,
-	 * otherwise try+fragsize must be still within the preimage,
-	 * and either case, the old piece should match the preimage
-	 * exactly.
-	 */
-	if ((match_end
-	     ? (try + preimage->len == img->len)
-	     : (try + preimage->len <= img->len)) &&
-	    !memcmp(img->buf + try, preimage->buf, preimage->len))
-		return 1;
+	if (preimage_limit == preimage->nr) {
+		/*
+		 * Do we have an exact match?  If we were told to match
+		 * at the end, size must be exactly at try+fragsize,
+		 * otherwise try+fragsize must be still within the preimage,
+		 * and either case, the old piece should match the preimage
+		 * exactly.
+		 */
+		if ((match_end
+		     ? (try + preimage->len == img->len)
+		     : (try + preimage->len <= img->len)) &&
+		    !memcmp(img->buf + try, preimage->buf, preimage->len))
+			return 1;
+	} else {
+		/*
+		 * The preimage extends beyond the end of img, so
+		 * there cannot be an exact match.
+		 *
+		 * There must be one non-blank context line that match
+		 * a line before the end of img.
+		 */
+		char *buf_end;
+
+		buf = preimage->buf;
+		buf_end = buf;
+		for (i = 0; i < preimage_limit; i++)
+			buf_end += preimage->line[i].len;
+
+		for ( ; buf < buf_end; buf++)
+			if (!isspace(*buf))
+				break;
+		if (buf == buf_end)
+			return 0;
+	}
 
 	/*
 	 * No exact match. If we are ignoring whitespace, run a line-by-line
@@ -1891,7 +1934,10 @@ static int match_fragment(struct image *img,
 		size_t imgoff = 0;
 		size_t preoff = 0;
 		size_t postlen = postimage->len;
-		for (i = 0; i < preimage->nr; i++) {
+		size_t extra_chars;
+		char *preimage_eof;
+		char *preimage_end;
+		for (i = 0; i < preimage_limit; i++) {
 			size_t prelen = preimage->line[i].len;
 			size_t imglen = img->line[try_lno+i].len;
 
@@ -1905,20 +1951,36 @@ static int match_fragment(struct image *img,
 		}
 
 		/*
-		 * Ok, the preimage matches with whitespace fuzz. Update it and
-		 * the common postimage lines to use the same whitespace as the
-		 * target. imgoff now holds the true length of the target that
-		 * matches the preimage, and we need to update the line lengths
-		 * of the preimage to match the target ones.
+		 * Ok, the preimage matches with whitespace fuzz.
+		 *
+		 * imgoff now holds the true length of the target that
+		 * matches the preimage before the end of the file.
+		 *
+		 * Count the number of characters in the preimage that fall
+		 * beyond the end of the file and make sure that all of them
+		 * are whitespace characters. (This can only happen if
+		 * we are removing blank lines at the end of the file.)
 		 */
-		fixed_buf = xmalloc(imgoff);
-		memcpy(fixed_buf, img->buf + try, imgoff);
-		for (i = 0; i < preimage->nr; i++)
-			preimage->line[i].len = img->line[try_lno+i].len;
+		buf = preimage_eof = preimage->buf + preoff;
+		for ( ; i < preimage->nr; i++)
+			preoff += preimage->line[i].len;
+		preimage_end = preimage->buf + preoff;
+		for ( ; buf < preimage_end; buf++)
+			if (!isspace(*buf))
+				return 0;
 
 		/*
-		 * Update the preimage buffer and the postimage context lines.
+		 * Update the preimage and the common postimage context
+		 * lines to use the same whitespace as the target.
+		 * If whitespace is missing in the target (i.e.
+		 * if the preimage extends beyond the end of the file),
+		 * use the whitespace from the preimage.
 		 */
+		extra_chars = preimage_end - preimage_eof;
+		fixed_buf = xmalloc(imgoff + extra_chars);
+		memcpy(fixed_buf, img->buf + try, imgoff);
+		memcpy(fixed_buf + imgoff, preimage_eof, extra_chars);
+		imgoff += extra_chars;
 		update_pre_post_images(preimage, postimage,
 				fixed_buf, imgoff, postlen);
 		return 1;
@@ -1932,12 +1994,16 @@ static int match_fragment(struct image *img,
 	 * it might with whitespace fuzz. We haven't been asked to
 	 * ignore whitespace, we were asked to correct whitespace
 	 * errors, so let's try matching after whitespace correction.
+	 *
+	 * The preimage may extend beyond the end of the file,
+	 * but in this loop we will only handle the part of the
+	 * preimage that falls within the file.
 	 */
 	fixed_buf = xmalloc(preimage->len + 1);
 	buf = fixed_buf;
 	orig = preimage->buf;
 	target = img->buf + try;
-	for (i = 0; i < preimage->nr; i++) {
+	for (i = 0; i < preimage_limit; i++) {
 		size_t fixlen; /* length after fixing the preimage */
 		size_t oldlen = preimage->line[i].len;
 		size_t tgtlen = img->line[try_lno + i].len;
@@ -1977,6 +2043,29 @@ static int match_fragment(struct image *img,
 		target += tgtlen;
 	}
 
+
+	/*
+	 * Now handle the lines in the preimage that falls beyond the
+	 * end of the file (if any). They will only match if they are
+	 * empty or only contain whitespace (if WS_BLANK_AT_EOL is
+	 * false).
+	 */
+	for ( ; i < preimage->nr; i++) {
+		size_t fixlen; /* length after fixing the preimage */
+		size_t oldlen = preimage->line[i].len;
+		int j;
+
+		/* Try fixing the line in the preimage */
+		fixlen = ws_fix_copy(buf, orig, oldlen, ws_rule, NULL);
+
+		for (j = 0; j < fixlen; j++)
+			if (!isspace(buf[j]))
+				goto unmatch_exit;
+
+		orig += oldlen;
+		buf += fixlen;
+	}
+
 	/*
 	 * Yes, the preimage is based on an older version that still
 	 * has whitespace breakages unfixed, and fixing them makes the
@@ -2002,9 +2091,6 @@ static int find_pos(struct image *img,
 	unsigned long backwards, forwards, try;
 	int backwards_lno, forwards_lno, try_lno;
 
-	if (preimage->nr > img->nr)
-		return -1;
-
 	/*
 	 * If match_beginning or match_end is specified, there is no
 	 * point starting from a wrong line that will never match and
@@ -2015,7 +2101,12 @@ static int find_pos(struct image *img,
 	else if (match_end)
 		line = img->nr - preimage->nr;
 
-	if (line > img->nr)
+	/*
+	 * Because the comparison is unsigned, the following test
+	 * will also take care of a negative line number that can
+	 * result when match_end and preimage is larger than the target.
+	 */
+	if ((size_t) line > img->nr)
 		line = img->nr;
 
 	try = 0;
@@ -2091,12 +2182,26 @@ static void update_image(struct image *img,
 	int i, nr;
 	size_t remove_count, insert_count, applied_at = 0;
 	char *result;
+	int preimage_limit;
+
+	/*
+	 * If we are removing blank lines at the end of img,
+	 * the preimage may extend beyond the end.
+	 * If that is the case, we must be careful only to
+	 * remove the part of the preimage that falls within
+	 * the boundaries of img. Initialize preimage_limit
+	 * to the number of lines in the preimage that falls
+	 * within the boundaries.
+	 */
+	preimage_limit = preimage->nr;
+	if (preimage_limit > img->nr - applied_pos)
+		preimage_limit = img->nr - applied_pos;
 
 	for (i = 0; i < applied_pos; i++)
 		applied_at += img->line[i].len;
 
 	remove_count = 0;
-	for (i = 0; i < preimage->nr; i++)
+	for (i = 0; i < preimage_limit; i++)
 		remove_count += img->line[applied_pos + i].len;
 	insert_count = postimage->len;
 
@@ -2113,8 +2218,8 @@ static void update_image(struct image *img,
 	result[img->len] = '\0';
 
 	/* Adjust the line table */
-	nr = img->nr + postimage->nr - preimage->nr;
-	if (preimage->nr < postimage->nr) {
+	nr = img->nr + postimage->nr - preimage_limit;
+	if (preimage_limit < postimage->nr) {
 		/*
 		 * NOTE: this knows that we never call remove_first_line()
 		 * on anything other than pre/post image.
@@ -2122,10 +2227,10 @@ static void update_image(struct image *img,
 		img->line = xrealloc(img->line, nr * sizeof(*img->line));
 		img->line_allocated = img->line;
 	}
-	if (preimage->nr != postimage->nr)
+	if (preimage_limit != postimage->nr)
 		memmove(img->line + applied_pos + postimage->nr,
-			img->line + applied_pos + preimage->nr,
-			(img->nr - (applied_pos + preimage->nr)) *
+			img->line + applied_pos + preimage_limit,
+			(img->nr - (applied_pos + preimage_limit)) *
 			sizeof(*img->line));
 	memcpy(img->line + applied_pos,
 	       postimage->line,
@@ -2321,7 +2426,7 @@ static int apply_one_fragment(struct image *img, struct fragment *frag,
 
 	if (applied_pos >= 0) {
 		if (new_blank_lines_at_end &&
-		    preimage.nr + applied_pos == img->nr &&
+		    preimage.nr + applied_pos >= img->nr &&
 		    (ws_rule & WS_BLANK_AT_EOF) &&
 		    ws_error_action != nowarn_ws_error) {
 			record_ws_error(WS_BLANK_AT_EOF, "+", 1, frag->linenr);
diff --git a/builtin-archive.c b/builtin/archive.c
index 6a887f5a9..6a887f5a9 100644
--- a/builtin-archive.c
+++ b/builtin/archive.c
diff --git a/builtin-bisect--helper.c b/builtin/bisect--helper.c
index 5b226399e..5b226399e 100644
--- a/builtin-bisect--helper.c
+++ b/builtin/bisect--helper.c
diff --git a/builtin-blame.c b/builtin/blame.c
index 10f7eacf6..fc1586350 100644
--- a/builtin-blame.c
+++ b/builtin/blame.c
@@ -1772,7 +1772,7 @@ static int lineno_width(int lines)
 {
 	int i, width;
 
-	for (width = 1, i = 10; i <= lines + 1; width++)
+	for (width = 1, i = 10; i <= lines; width++)
 		i *= 10;
 	return width;
 }
diff --git a/builtin-branch.c b/builtin/branch.c
index a28a13986..6cf7e721e 100644
--- a/builtin-branch.c
+++ b/builtin/branch.c
@@ -610,7 +610,7 @@ int cmd_branch(int argc, const char **argv, const char *prefix)
 			BRANCH_TRACK_EXPLICIT),
 		OPT_SET_INT( 0, "set-upstream",  &track, "change upstream info",
 			BRANCH_TRACK_OVERRIDE),
-		OPT_BOOLEAN( 0 , "color",  &branch_use_color, "use colored output"),
+		OPT__COLOR(&branch_use_color, "use colored output"),
 		OPT_SET_INT('r', NULL,     &kinds, "act on remote-tracking branches",
 			REF_REMOTE_BRANCH),
 		{
diff --git a/builtin-bundle.c b/builtin/bundle.c
index 2006cc5cd..2006cc5cd 100644
--- a/builtin-bundle.c
+++ b/builtin/bundle.c
diff --git a/builtin-cat-file.c b/builtin/cat-file.c
index a933eaa04..a933eaa04 100644
--- a/builtin-cat-file.c
+++ b/builtin/cat-file.c
diff --git a/builtin-check-attr.c b/builtin/check-attr.c
index 3016d29ca..3016d29ca 100644
--- a/builtin-check-attr.c
+++ b/builtin/check-attr.c
diff --git a/builtin-check-ref-format.c b/builtin/check-ref-format.c
index b106c65d8..b106c65d8 100644
--- a/builtin-check-ref-format.c
+++ b/builtin/check-ref-format.c
diff --git a/builtin-checkout-index.c b/builtin/checkout-index.c
index a7a5ee10f..a7a5ee10f 100644
--- a/builtin-checkout-index.c
+++ b/builtin/checkout-index.c
diff --git a/builtin-checkout.c b/builtin/checkout.c
index c5ab7835e..acefaaf41 100644
--- a/builtin-checkout.c
+++ b/builtin/checkout.c
@@ -128,24 +128,6 @@ static int checkout_stage(int stage, struct cache_entry *ce, int pos,
 		     (stage == 2) ? "our" : "their");
 }
 
-/* NEEDSWORK: share with merge-recursive */
-static void fill_mm(const unsigned char *sha1, mmfile_t *mm)
-{
-	unsigned long size;
-	enum object_type type;
-
-	if (!hashcmp(sha1, null_sha1)) {
-		mm->ptr = xstrdup("");
-		mm->size = 0;
-		return;
-	}
-
-	mm->ptr = read_sha1_file(sha1, &type, &size);
-	if (!mm->ptr || type != OBJ_BLOB)
-		die("unable to read blob object %s", sha1_to_hex(sha1));
-	mm->size = size;
-}
-
 static int checkout_merged(int pos, struct checkout *state)
 {
 	struct cache_entry *ce = active_cache[pos];
@@ -163,9 +145,9 @@ static int checkout_merged(int pos, struct checkout *state)
 	    ce_stage(active_cache[pos+2]) != 3)
 		return error("path '%s' does not have all 3 versions", path);
 
-	fill_mm(active_cache[pos]->sha1, &ancestor);
-	fill_mm(active_cache[pos+1]->sha1, &ours);
-	fill_mm(active_cache[pos+2]->sha1, &theirs);
+	read_mmblob(&ancestor, active_cache[pos]->sha1);
+	read_mmblob(&ours, active_cache[pos+1]->sha1);
+	read_mmblob(&theirs, active_cache[pos+2]->sha1);
 
 	status = ll_merge(&result_buf, path, &ancestor,
 			  &ours, "ours", &theirs, "theirs", 0);
diff --git a/builtin-clean.c b/builtin/clean.c
index fac64e6cd..fac64e6cd 100644
--- a/builtin-clean.c
+++ b/builtin/clean.c
diff --git a/builtin-clone.c b/builtin/clone.c
index 58bacbd55..05f8fb477 100644
--- a/builtin-clone.c
+++ b/builtin/clone.c
@@ -37,18 +37,17 @@ static const char * const builtin_clone_usage[] = {
 	NULL
 };
 
-static int option_quiet, option_no_checkout, option_bare, option_mirror;
+static int option_no_checkout, option_bare, option_mirror;
 static int option_local, option_no_hardlinks, option_shared, option_recursive;
 static char *option_template, *option_reference, *option_depth;
 static char *option_origin = NULL;
 static char *option_branch = NULL;
 static char *option_upload_pack = "git-upload-pack";
-static int option_verbose;
+static int option_verbosity;
 static int option_progress;
 
 static struct option builtin_clone_options[] = {
-	OPT__QUIET(&option_quiet),
-	OPT__VERBOSE(&option_verbose),
+	OPT__VERBOSITY(&option_verbosity),
 	OPT_BOOLEAN(0, "progress", &option_progress,
 			"force progress reporting"),
 	OPT_BOOLEAN('n', "no-checkout", &option_no_checkout,
@@ -462,7 +461,7 @@ int cmd_clone(int argc, const char **argv, const char *prefix)
 		die("could not create leading directories of '%s'", git_dir);
 	set_git_dir(make_absolute_path(git_dir));
 
-	init_db(option_template, option_quiet ? INIT_DB_QUIET : 0);
+	init_db(option_template, (option_verbosity < 0) ? INIT_DB_QUIET : 0);
 
 	/*
 	 * At this point, the config exists, so we do not need the
@@ -526,13 +525,7 @@ int cmd_clone(int argc, const char **argv, const char *prefix)
 			transport_set_option(transport, TRANS_OPT_DEPTH,
 					     option_depth);
 
-		if (option_quiet)
-			transport->verbose = -1;
-		else if (option_verbose)
-			transport->verbose = 1;
-
-		if (option_progress)
-			transport->progress = 1;
+		transport_set_verbosity(transport, option_verbosity, option_progress);
 
 		if (option_upload_pack)
 			transport_set_option(transport, TRANS_OPT_UPLOADPACK,
@@ -641,7 +634,7 @@ int cmd_clone(int argc, const char **argv, const char *prefix)
 		opts.update = 1;
 		opts.merge = 1;
 		opts.fn = oneway_merge;
-		opts.verbose_update = !option_quiet;
+		opts.verbose_update = (option_verbosity > 0);
 		opts.src_index = &the_index;
 		opts.dst_index = &the_index;
 
diff --git a/builtin-commit-tree.c b/builtin/commit-tree.c
index 90dac349a..90dac349a 100644
--- a/builtin-commit-tree.c
+++ b/builtin/commit-tree.c
diff --git a/builtin-commit.c b/builtin/commit.c
index 46513bf90..f4c73442c 100644
--- a/builtin-commit.c
+++ b/builtin/commit.c
@@ -1046,7 +1046,7 @@ int cmd_status(int argc, const char **argv, const char *prefix)
 	if (*argv)
 		s.pathspec = get_pathspec(prefix, argv);
 
-	read_cache();
+	read_cache_preload(s.pathspec);
 	refresh_index(&the_index, REFRESH_QUIET|REFRESH_UNMERGED, s.pathspec, NULL, NULL);
 	s.is_initial = get_sha1(s.reference, sha1) ? 1 : 0;
 	s.in_merge = in_merge;
diff --git a/builtin-config.c b/builtin/config.c
index 4bc46b15f..4bc46b15f 100644
--- a/builtin-config.c
+++ b/builtin/config.c
diff --git a/builtin-count-objects.c b/builtin/count-objects.c
index 2bdd8ebde..2bdd8ebde 100644
--- a/builtin-count-objects.c
+++ b/builtin/count-objects.c
diff --git a/builtin-describe.c b/builtin/describe.c
index 71be2a936..71be2a936 100644
--- a/builtin-describe.c
+++ b/builtin/describe.c
diff --git a/builtin-diff-files.c b/builtin/diff-files.c
index 5b64011de..5b64011de 100644
--- a/builtin-diff-files.c
+++ b/builtin/diff-files.c
diff --git a/builtin-diff-index.c b/builtin/diff-index.c
index 04837494f..04837494f 100644
--- a/builtin-diff-index.c
+++ b/builtin/diff-index.c
diff --git a/builtin-diff-tree.c b/builtin/diff-tree.c
index 2380c2195..2380c2195 100644
--- a/builtin-diff-tree.c
+++ b/builtin/diff-tree.c
diff --git a/builtin-diff.c b/builtin/diff.c
index ffcdd055c..ffcdd055c 100644
--- a/builtin-diff.c
+++ b/builtin/diff.c
diff --git a/builtin-fast-export.c b/builtin/fast-export.c
index b0a4029c9..b0a4029c9 100644
--- a/builtin-fast-export.c
+++ b/builtin/fast-export.c
diff --git a/builtin-fetch-pack.c b/builtin/fetch-pack.c
index dbd8b7bcc..dbd8b7bcc 100644
--- a/builtin-fetch-pack.c
+++ b/builtin/fetch-pack.c
diff --git a/builtin-fetch.c b/builtin/fetch.c
index 8654fa7a2..957be9f92 100644
--- a/builtin-fetch.c
+++ b/builtin/fetch.c
@@ -11,6 +11,7 @@
 #include "run-command.h"
 #include "parse-options.h"
 #include "sigchain.h"
+#include "transport.h"
 
 static const char * const builtin_fetch_usage[] = {
 	"git fetch [options] [<repository> <refspec>...]",
@@ -27,6 +28,7 @@ enum {
 };
 
 static int all, append, dry_run, force, keep, multiple, prune, update_head_ok, verbosity;
+static int progress;
 static int tags = TAGS_DEFAULT;
 static const char *depth;
 static const char *upload_pack;
@@ -56,6 +58,7 @@ static struct option builtin_fetch_options[] = {
 	OPT_BOOLEAN('k', "keep", &keep, "keep downloaded pack"),
 	OPT_BOOLEAN('u', "update-head-ok", &update_head_ok,
 		    "allow updating of HEAD ref"),
+	OPT_BOOLEAN(0, "progress", &progress, "force progress reporting"),
 	OPT_STRING(0, "depth", &depth, "DEPTH",
 		   "deepen history of shallow clone"),
 	OPT_END()
@@ -104,10 +107,8 @@ static void add_merge_config(struct ref **head,
 		 * there is no entry in the resulting FETCH_HEAD marked
 		 * for merging.
 		 */
+		memset(&refspec, 0, sizeof(refspec));
 		refspec.src = branch->merge[i]->src;
-		refspec.dst = NULL;
-		refspec.pattern = 0;
-		refspec.force = 0;
 		get_fetch_map(remote_refs, &refspec, tail, 1);
 		for (rm = *old_tail; rm; rm = rm->next)
 			rm->merge = 1;
@@ -205,7 +206,6 @@ static int s_update_ref(const char *action,
 	return 0;
 }
 
-#define SUMMARY_WIDTH (2 * DEFAULT_ABBREV + 3)
 #define REFCOL_WIDTH  10
 
 static int update_local_ref(struct ref *ref,
@@ -224,7 +224,7 @@ static int update_local_ref(struct ref *ref,
 
 	if (!hashcmp(ref->old_sha1, ref->new_sha1)) {
 		if (verbosity > 0)
-			sprintf(display, "= %-*s %-*s -> %s", SUMMARY_WIDTH,
+			sprintf(display, "= %-*s %-*s -> %s", TRANSPORT_SUMMARY_WIDTH,
 				"[up to date]", REFCOL_WIDTH, remote,
 				pretty_ref);
 		return 0;
@@ -239,7 +239,7 @@ static int update_local_ref(struct ref *ref,
 		 * the head, and the old value of the head isn't empty...
 		 */
 		sprintf(display, "! %-*s %-*s -> %s  (can't fetch in current branch)",
-			SUMMARY_WIDTH, "[rejected]", REFCOL_WIDTH, remote,
+			TRANSPORT_SUMMARY_WIDTH, "[rejected]", REFCOL_WIDTH, remote,
 			pretty_ref);
 		return 1;
 	}
@@ -249,7 +249,7 @@ static int update_local_ref(struct ref *ref,
 		int r;
 		r = s_update_ref("updating tag", ref, 0);
 		sprintf(display, "%c %-*s %-*s -> %s%s", r ? '!' : '-',
-			SUMMARY_WIDTH, "[tag update]", REFCOL_WIDTH, remote,
+			TRANSPORT_SUMMARY_WIDTH, "[tag update]", REFCOL_WIDTH, remote,
 			pretty_ref, r ? "  (unable to update local ref)" : "");
 		return r;
 	}
@@ -271,7 +271,7 @@ static int update_local_ref(struct ref *ref,
 
 		r = s_update_ref(msg, ref, 0);
 		sprintf(display, "%c %-*s %-*s -> %s%s", r ? '!' : '*',
-			SUMMARY_WIDTH, what, REFCOL_WIDTH, remote, pretty_ref,
+			TRANSPORT_SUMMARY_WIDTH, what, REFCOL_WIDTH, remote, pretty_ref,
 			r ? "  (unable to update local ref)" : "");
 		return r;
 	}
@@ -284,7 +284,7 @@ static int update_local_ref(struct ref *ref,
 		strcat(quickref, find_unique_abbrev(ref->new_sha1, DEFAULT_ABBREV));
 		r = s_update_ref("fast-forward", ref, 1);
 		sprintf(display, "%c %-*s %-*s -> %s%s", r ? '!' : ' ',
-			SUMMARY_WIDTH, quickref, REFCOL_WIDTH, remote,
+			TRANSPORT_SUMMARY_WIDTH, quickref, REFCOL_WIDTH, remote,
 			pretty_ref, r ? "  (unable to update local ref)" : "");
 		return r;
 	} else if (force || ref->force) {
@@ -295,13 +295,13 @@ static int update_local_ref(struct ref *ref,
 		strcat(quickref, find_unique_abbrev(ref->new_sha1, DEFAULT_ABBREV));
 		r = s_update_ref("forced-update", ref, 1);
 		sprintf(display, "%c %-*s %-*s -> %s  (%s)", r ? '!' : '+',
-			SUMMARY_WIDTH, quickref, REFCOL_WIDTH, remote,
+			TRANSPORT_SUMMARY_WIDTH, quickref, REFCOL_WIDTH, remote,
 			pretty_ref,
 			r ? "unable to update local ref" : "forced update");
 		return r;
 	} else {
 		sprintf(display, "! %-*s %-*s -> %s  (non-fast-forward)",
-			SUMMARY_WIDTH, "[rejected]", REFCOL_WIDTH, remote,
+			TRANSPORT_SUMMARY_WIDTH, "[rejected]", REFCOL_WIDTH, remote,
 			pretty_ref);
 		return 1;
 	}
@@ -389,11 +389,12 @@ static int store_updated_refs(const char *raw_url, const char *remote_name,
 				fputc(url[i], fp);
 		fputc('\n', fp);
 
-		if (ref)
+		if (ref) {
 			rc |= update_local_ref(ref, what, note);
-		else
+			free(ref);
+		} else
 			sprintf(note, "* %-*s %-*s -> FETCH_HEAD",
-				SUMMARY_WIDTH, *kind ? kind : "branch",
+				TRANSPORT_SUMMARY_WIDTH, *kind ? kind : "branch",
 				 REFCOL_WIDTH, *what ? what : "HEAD");
 		if (*note) {
 			if (verbosity >= 0 && !shown_url) {
@@ -514,7 +515,7 @@ static int prune_refs(struct transport *transport, struct ref *ref_map)
 			result |= delete_ref(ref->name, NULL, 0);
 		if (verbosity >= 0) {
 			fprintf(stderr, " x %-*s %-*s -> %s\n",
-				SUMMARY_WIDTH, "[deleted]",
+				TRANSPORT_SUMMARY_WIDTH, "[deleted]",
 				REFCOL_WIDTH, "(none)", prettify_refname(ref->name));
 			warn_dangling_symref(stderr, dangling_msg, ref->name);
 		}
@@ -588,7 +589,7 @@ static void find_non_local_tags(struct transport *transport,
 		 * to fetch then we can mark the ref entry in the list
 		 * as one to ignore by setting util to NULL.
 		 */
-		if (!strcmp(ref->name + strlen(ref->name) - 3, "^{}")) {
+		if (!suffixcmp(ref->name, "^{}")) {
 			if (item && !has_sha1_file(ref->old_sha1) &&
 			    !will_fetch(head, ref->old_sha1) &&
 			    !has_sha1_file(item->util) &&
@@ -651,6 +652,17 @@ static void check_not_current_branch(struct ref *ref_map)
 			    "of non-bare repository", current_branch->refname);
 }
 
+static int truncate_fetch_head(void)
+{
+	char *filename = git_path("FETCH_HEAD");
+	FILE *fp = fopen(filename, "w");
+
+	if (!fp)
+		return error("cannot open %s: %s\n", filename, strerror(errno));
+	fclose(fp);
+	return 0;
+}
+
 static int do_fetch(struct transport *transport,
 		    struct refspec *refs, int ref_count)
 {
@@ -672,11 +684,9 @@ static int do_fetch(struct transport *transport,
 
 	/* if not appending, truncate FETCH_HEAD */
 	if (!append && !dry_run) {
-		char *filename = git_path("FETCH_HEAD");
-		FILE *fp = fopen(filename, "w");
-		if (!fp)
-			return error("cannot open %s: %s\n", filename, strerror(errno));
-		fclose(fp);
+		int errcode = truncate_fetch_head();
+		if (errcode)
+			return errcode;
 	}
 
 	ref_map = get_ref_map(transport, refs, ref_count, tags, &autotags);
@@ -784,13 +794,19 @@ static int add_remote_or_group(const char *name, struct string_list *list)
 static int fetch_multiple(struct string_list *list)
 {
 	int i, result = 0;
-	const char *argv[] = { "fetch", NULL, NULL, NULL, NULL, NULL, NULL };
-	int argc = 1;
+	const char *argv[11] = { "fetch", "--append" };
+	int argc = 2;
 
 	if (dry_run)
 		argv[argc++] = "--dry-run";
 	if (prune)
 		argv[argc++] = "--prune";
+	if (update_head_ok)
+		argv[argc++] = "--update-head-ok";
+	if (force)
+		argv[argc++] = "--force";
+	if (keep)
+		argv[argc++] = "--keep";
 	if (verbosity >= 2)
 		argv[argc++] = "-v";
 	if (verbosity >= 1)
@@ -798,9 +814,16 @@ static int fetch_multiple(struct string_list *list)
 	else if (verbosity < 0)
 		argv[argc++] = "-q";
 
+	if (!append && !dry_run) {
+		int errcode = truncate_fetch_head();
+		if (errcode)
+			return errcode;
+	}
+
 	for (i = 0; i < list->nr; i++) {
 		const char *name = list->items[i].string;
 		argv[argc] = name;
+		argv[argc + 1] = NULL;
 		if (verbosity >= 0)
 			printf("Fetching %s\n", name);
 		if (run_command_v_opt(argv, RUN_GIT_CMD)) {
@@ -823,10 +846,7 @@ static int fetch_one(struct remote *remote, int argc, const char **argv)
 		die("Where do you want to fetch from today?");
 
 	transport = transport_get(remote, NULL);
-	if (verbosity >= 2)
-		transport->verbose = verbosity <= 3 ? verbosity : 3;
-	if (verbosity < 0)
-		transport->verbose = -1;
+	transport_set_verbosity(transport, verbosity, progress);
 	if (upload_pack)
 		set_option(TRANS_OPT_UPLOADPACK, upload_pack);
 	if (keep)
diff --git a/builtin-fmt-merge-msg.c b/builtin/fmt-merge-msg.c
index 9d524000b..9d524000b 100644
--- a/builtin-fmt-merge-msg.c
+++ b/builtin/fmt-merge-msg.c
diff --git a/builtin-for-each-ref.c b/builtin/for-each-ref.c
index a5a83f146..62be1bbfd 100644
--- a/builtin-for-each-ref.c
+++ b/builtin/for-each-ref.c
@@ -33,6 +33,8 @@ struct ref_sort {
 struct refinfo {
 	char *refname;
 	unsigned char objectname[20];
+	int flag;
+	const char *symref;
 	struct atom_value *value;
 };
 
@@ -68,6 +70,8 @@ static struct {
 	{ "body" },
 	{ "contents" },
 	{ "upstream" },
+	{ "symref" },
+	{ "flag" },
 };
 
 /*
@@ -82,7 +86,7 @@ static struct {
  */
 static const char **used_atom;
 static cmp_type *used_atom_type;
-static int used_atom_cnt, sort_atom_limit, need_tagged;
+static int used_atom_cnt, sort_atom_limit, need_tagged, need_symref;
 
 /*
  * Used to parse format string and sort specifiers
@@ -133,6 +137,10 @@ static int parse_atom(const char *atom, const char *ep)
 				  (sizeof(*used_atom_type) * used_atom_cnt));
 	used_atom[at] = xmemdupz(atom, ep - atom);
 	used_atom_type[at] = valid_atom[i].cmp_type;
+	if (*atom == '*')
+		need_tagged = 1;
+	if (!strcmp(used_atom[at], "symref"))
+		need_symref = 1;
 	return at;
 }
 
@@ -143,7 +151,8 @@ static const char *find_next(const char *cp)
 {
 	while (*cp) {
 		if (*cp == '%') {
-			/* %( is the start of an atom;
+			/*
+			 * %( is the start of an atom;
 			 * %% is a quoted per-cent.
 			 */
 			if (cp[1] == '(')
@@ -420,7 +429,8 @@ static void grab_person(const char *who, struct atom_value *val, int deref, stru
 			grab_date(wholine, v, name);
 	}
 
-	/* For a tag or a commit object, if "creator" or "creatordate" is
+	/*
+	 * For a tag or a commit object, if "creator" or "creatordate" is
 	 * requested, do something special.
 	 */
 	if (strcmp(who, "tagger") && strcmp(who, "committer"))
@@ -502,7 +512,8 @@ static void grab_sub_body_contents(struct atom_value *val, int deref, struct obj
 	}
 }
 
-/* We want to have empty print-string for field requests
+/*
+ * We want to have empty print-string for field requests
  * that do not apply (e.g. "authordate" for a tag object)
  */
 static void fill_missing_values(struct atom_value *val)
@@ -548,6 +559,13 @@ static void grab_values(struct atom_value *val, int deref, struct object *obj, v
 	}
 }
 
+static inline char *copy_advance(char *dst, const char *src)
+{
+	while (*src)
+		*dst++ = *src++;
+	return dst;
+}
+
 /*
  * Parse the object referred by ref, and grab needed value.
  */
@@ -561,6 +579,16 @@ static void populate_value(struct refinfo *ref)
 
 	ref->value = xcalloc(sizeof(struct atom_value), used_atom_cnt);
 
+	if (need_symref && (ref->flag & REF_ISSYMREF) && !ref->symref) {
+		unsigned char unused1[20];
+		const char *symref;
+		symref = resolve_ref(ref->refname, unused1, 1, NULL);
+		if (symref)
+			ref->symref = xstrdup(symref);
+		else
+			ref->symref = "";
+	}
+
 	/* Fill in specials first */
 	for (i = 0; i < used_atom_cnt; i++) {
 		const char *name = used_atom[i];
@@ -576,6 +604,8 @@ static void populate_value(struct refinfo *ref)
 
 		if (!prefixcmp(name, "refname"))
 			refname = ref->refname;
+		else if (!prefixcmp(name, "symref"))
+			refname = ref->symref ? ref->symref : "";
 		else if (!prefixcmp(name, "upstream")) {
 			struct branch *branch;
 			/* only local branches may have an upstream */
@@ -588,6 +618,20 @@ static void populate_value(struct refinfo *ref)
 				continue;
 			refname = branch->merge[0]->dst;
 		}
+		else if (!strcmp(name, "flag")) {
+			char buf[256], *cp = buf;
+			if (ref->flag & REF_ISSYMREF)
+				cp = copy_advance(cp, ",symref");
+			if (ref->flag & REF_ISPACKED)
+				cp = copy_advance(cp, ",packed");
+			if (cp == buf)
+				v->s = "";
+			else {
+				*cp = '\0';
+				v->s = xstrdup(buf + 1);
+			}
+			continue;
+		}
 		else
 			continue;
 
@@ -633,18 +677,21 @@ static void populate_value(struct refinfo *ref)
 	if (!eaten)
 		free(buf);
 
-	/* If there is no atom that wants to know about tagged
+	/*
+	 * If there is no atom that wants to know about tagged
 	 * object, we are done.
 	 */
 	if (!need_tagged || (obj->type != OBJ_TAG))
 		return;
 
-	/* If it is a tag object, see if we use a value that derefs
+	/*
+	 * If it is a tag object, see if we use a value that derefs
 	 * the object, and if we do grab the object it refers to.
 	 */
 	tagged = ((struct tag *)obj)->tagged->sha1;
 
-	/* NEEDSWORK: This derefs tag only once, which
+	/*
+	 * NEEDSWORK: This derefs tag only once, which
 	 * is good to deal with chains of trust, but
 	 * is not consistent with what deref_tag() does
 	 * which peels the onion to the core.
@@ -681,9 +728,8 @@ struct grab_ref_cbdata {
 };
 
 /*
- * A call-back given to for_each_ref().  It is unfortunate that we
- * need to use global variables to pass extra information to this
- * function.
+ * A call-back given to for_each_ref().  Filter refs and keep them for
+ * later object processing.
  */
 static int grab_single_ref(const char *refname, const unsigned char *sha1, int flag, void *cb_data)
 {
@@ -711,13 +757,15 @@ static int grab_single_ref(const char *refname, const unsigned char *sha1, int f
 			return 0;
 	}
 
-	/* We do not open the object yet; sort may only need refname
+	/*
+	 * We do not open the object yet; sort may only need refname
 	 * to do its job and the resulting list may yet to be pruned
 	 * by maxcount logic.
 	 */
 	ref = xcalloc(1, sizeof(*ref));
 	ref->refname = xstrdup(refname);
 	hashcpy(ref->objectname, sha1);
+	ref->flag = flag;
 
 	cnt = cb->grab_cnt;
 	cb->grab_array = xrealloc(cb->grab_array,
@@ -938,13 +986,6 @@ int cmd_for_each_ref(int argc, const char **argv, const char *prefix)
 	refs = cbdata.grab_array;
 	num_refs = cbdata.grab_cnt;
 
-	for (i = 0; i < used_atom_cnt; i++) {
-		if (used_atom[i][0] == '*') {
-			need_tagged = 1;
-			break;
-		}
-	}
-
 	sort_refs(sort, refs, num_refs);
 
 	if (!maxcount || num_refs < maxcount)
diff --git a/builtin-fsck.c b/builtin/fsck.c
index 0929c7f24..0929c7f24 100644
--- a/builtin-fsck.c
+++ b/builtin/fsck.c
diff --git a/builtin-gc.c b/builtin/gc.c
index c304638b7..c304638b7 100644
--- a/builtin-gc.c
+++ b/builtin/gc.c
diff --git a/builtin-grep.c b/builtin/grep.c
index d455176f7..9d30ddb28 100644
--- a/builtin-grep.c
+++ b/builtin/grep.c
@@ -825,7 +825,7 @@ int cmd_grep(int argc, const char **argv, const char *prefix)
 			"print NUL after filenames"),
 		OPT_BOOLEAN('c', "count", &opt.count,
 			"show the number of matches instead of matching lines"),
-		OPT_SET_INT(0, "color", &opt.color, "highlight matches", 1),
+		OPT__COLOR(&opt.color, "highlight matches"),
 		OPT_GROUP(""),
 		OPT_CALLBACK('C', NULL, &opt, "n",
 			"show <n> context lines before and after matches",
@@ -882,6 +882,7 @@ int cmd_grep(int argc, const char **argv, const char *prefix)
 	opt.relative = 1;
 	opt.pathname = 1;
 	opt.pattern_tail = &opt.pattern_list;
+	opt.header_tail = &opt.header_list;
 	opt.regflags = REG_NEWLINE;
 	opt.max_depth = -1;
 
diff --git a/builtin-hash-object.c b/builtin/hash-object.c
index 6a5f5b5f0..080af1a01 100644
--- a/builtin-hash-object.c
+++ b/builtin/hash-object.c
@@ -33,6 +33,8 @@ static void hash_object(const char *path, const char *type, int write_object,
 	hash_fd(fd, type, write_object, vpath);
 }
 
+static int no_filters;
+
 static void hash_stdin_paths(const char *type, int write_objects)
 {
 	struct strbuf buf = STRBUF_INIT, nbuf = STRBUF_INIT;
@@ -44,7 +46,8 @@ static void hash_stdin_paths(const char *type, int write_objects)
 				die("line is badly quoted");
 			strbuf_swap(&buf, &nbuf);
 		}
-		hash_object(buf.buf, type, write_objects, buf.buf);
+		hash_object(buf.buf, type, write_objects,
+		    no_filters ? NULL : buf.buf);
 	}
 	strbuf_release(&buf);
 	strbuf_release(&nbuf);
@@ -60,7 +63,6 @@ static const char *type;
 static int write_object;
 static int hashstdin;
 static int stdin_paths;
-static int no_filters;
 static const char *vpath;
 
 static const struct option hash_object_options[] = {
@@ -100,8 +102,6 @@ int cmd_hash_object(int argc, const char **argv, const char *prefix)
 			errstr = "Can't specify files with --stdin-paths";
 		else if (vpath)
 			errstr = "Can't use --stdin-paths with --path";
-		else if (no_filters)
-			errstr = "Can't use --stdin-paths with --no-filters";
 	}
 	else {
 		if (hashstdin > 1)
diff --git a/builtin-help.c b/builtin/help.c
index 3182a2bec..3182a2bec 100644
--- a/builtin-help.c
+++ b/builtin/help.c
diff --git a/builtin-index-pack.c b/builtin/index-pack.c
index b4cf8c53e..b4cf8c53e 100644
--- a/builtin-index-pack.c
+++ b/builtin/index-pack.c
diff --git a/builtin-init-db.c b/builtin/init-db.c
index dd84caecb..edc40ff57 100644
--- a/builtin-init-db.c
+++ b/builtin/init-db.c
@@ -20,6 +20,7 @@
 
 static int init_is_bare_repository = 0;
 static int init_shared_repository = -1;
+static const char *init_db_template_dir;
 
 static void safe_create_dir(const char *dir, int share)
 {
@@ -121,6 +122,8 @@ static void copy_templates(const char *template_dir)
 	if (!template_dir)
 		template_dir = getenv(TEMPLATE_DIR_ENVIRONMENT);
 	if (!template_dir)
+		template_dir = init_db_template_dir;
+	if (!template_dir)
 		template_dir = system_path(DEFAULT_GIT_TEMPLATE_DIR);
 	if (!template_dir[0])
 		return;
@@ -165,6 +168,14 @@ static void copy_templates(const char *template_dir)
 	closedir(dir);
 }
 
+static int git_init_db_config(const char *k, const char *v, void *cb)
+{
+	if (!strcmp(k, "init.templatedir"))
+		return git_config_pathname(&init_db_template_dir, k, v);
+
+	return 0;
+}
+
 static int create_default_files(const char *template_path)
 {
 	const char *git_dir = get_git_dir();
@@ -190,6 +201,9 @@ static int create_default_files(const char *template_path)
 	safe_create_dir(git_path("refs/heads"), 1);
 	safe_create_dir(git_path("refs/tags"), 1);
 
+	/* Just look for `init.templatedir` */
+	git_config(git_init_db_config, NULL);
+
 	/* First copy the templates -- we might have the default
 	 * config file there, in which case we would want to read
 	 * from it after installing.
@@ -331,11 +345,14 @@ int init_db(const char *template_dir, unsigned int flags)
 		git_config_set("receive.denyNonFastforwards", "true");
 	}
 
-	if (!(flags & INIT_DB_QUIET))
-		printf("%s%s Git repository in %s/\n",
+	if (!(flags & INIT_DB_QUIET)) {
+		const char *git_dir = get_git_dir();
+		int len = strlen(git_dir);
+		printf("%s%s Git repository in %s%s\n",
 		       reinit ? "Reinitialized existing" : "Initialized empty",
 		       shared_repository ? " shared" : "",
-		       get_git_dir());
+		       git_dir, len && git_dir[len-1] != '/' ? "/" : "");
+	}
 
 	return 0;
 }
diff --git a/builtin-log.c b/builtin/log.c
index e0d5caa61..9fbc7ab9c 100644
--- a/builtin-log.c
+++ b/builtin/log.c
@@ -458,35 +458,28 @@ static int auto_number = 1;
 
 static char *default_attach = NULL;
 
-static char **extra_hdr;
-static int extra_hdr_nr;
-static int extra_hdr_alloc;
-
-static char **extra_to;
-static int extra_to_nr;
-static int extra_to_alloc;
-
-static char **extra_cc;
-static int extra_cc_nr;
-static int extra_cc_alloc;
+static struct string_list extra_hdr;
+static struct string_list extra_to;
+static struct string_list extra_cc;
 
 static void add_header(const char *value)
 {
+	struct string_list_item *item;
 	int len = strlen(value);
 	while (len && value[len - 1] == '\n')
 		len--;
+
 	if (!strncasecmp(value, "to: ", 4)) {
-		ALLOC_GROW(extra_to, extra_to_nr + 1, extra_to_alloc);
-		extra_to[extra_to_nr++] = xstrndup(value + 4, len - 4);
-		return;
-	}
-	if (!strncasecmp(value, "cc: ", 4)) {
-		ALLOC_GROW(extra_cc, extra_cc_nr + 1, extra_cc_alloc);
-		extra_cc[extra_cc_nr++] = xstrndup(value + 4, len - 4);
-		return;
+		item = string_list_append(value + 4, &extra_to);
+		len -= 4;
+	} else if (!strncasecmp(value, "cc: ", 4)) {
+		item = string_list_append(value + 4, &extra_cc);
+		len -= 4;
+	} else {
+		item = string_list_append(value, &extra_hdr);
 	}
-	ALLOC_GROW(extra_hdr, extra_hdr_nr + 1, extra_hdr_alloc);
-	extra_hdr[extra_hdr_nr++] = xstrndup(value, len);
+
+	item->string[len] = '\0';
 }
 
 #define THREAD_SHALLOW 1
@@ -504,11 +497,16 @@ static int git_format_config(const char *var, const char *value, void *cb)
 	}
 	if (!strcmp(var, "format.suffix"))
 		return git_config_string(&fmt_patch_suffix, var, value);
+	if (!strcmp(var, "format.to")) {
+		if (!value)
+			return config_error_nonbool(var);
+		string_list_append(value, &extra_to);
+		return 0;
+	}
 	if (!strcmp(var, "format.cc")) {
 		if (!value)
 			return config_error_nonbool(var);
-		ALLOC_GROW(extra_cc, extra_cc_nr + 1, extra_cc_alloc);
-		extra_cc[extra_cc_nr++] = xstrdup(value);
+		string_list_append(value, &extra_cc);
 		return 0;
 	}
 	if (!strcmp(var, "diff.color") || !strcmp(var, "color.diff")) {
@@ -871,14 +869,31 @@ static int inline_callback(const struct option *opt, const char *arg, int unset)
 
 static int header_callback(const struct option *opt, const char *arg, int unset)
 {
-	add_header(arg);
+	if (unset) {
+		string_list_clear(&extra_hdr, 0);
+		string_list_clear(&extra_to, 0);
+		string_list_clear(&extra_cc, 0);
+	} else {
+	    add_header(arg);
+	}
+	return 0;
+}
+
+static int to_callback(const struct option *opt, const char *arg, int unset)
+{
+	if (unset)
+		string_list_clear(&extra_to, 0);
+	else
+		string_list_append(arg, &extra_to);
 	return 0;
 }
 
 static int cc_callback(const struct option *opt, const char *arg, int unset)
 {
-	ALLOC_GROW(extra_cc, extra_cc_nr + 1, extra_cc_alloc);
-	extra_cc[extra_cc_nr++] = xstrdup(arg);
+	if (unset)
+		string_list_clear(&extra_cc, 0);
+	else
+		string_list_append(arg, &extra_cc);
 	return 0;
 }
 
@@ -937,10 +952,11 @@ int cmd_format_patch(int argc, const char **argv, const char *prefix)
 		  PARSE_OPT_NONEG | PARSE_OPT_NOARG },
 		OPT_GROUP("Messaging"),
 		{ OPTION_CALLBACK, 0, "add-header", NULL, "header",
-			    "add email header", PARSE_OPT_NONEG,
-			    header_callback },
+			    "add email header", 0, header_callback },
+		{ OPTION_CALLBACK, 0, "to", NULL, "email", "add To: header",
+			    0, to_callback },
 		{ OPTION_CALLBACK, 0, "cc", NULL, "email", "add Cc: header",
-			    PARSE_OPT_NONEG, cc_callback },
+			    0, cc_callback },
 		OPT_STRING(0, "in-reply-to", &in_reply_to, "message-id",
 			    "make first mail a reply to <message-id>"),
 		{ OPTION_CALLBACK, 0, "attach", &rev, "boundary",
@@ -956,6 +972,9 @@ int cmd_format_patch(int argc, const char **argv, const char *prefix)
 		OPT_END()
 	};
 
+	extra_hdr.strdup_strings = 1;
+	extra_to.strdup_strings = 1;
+	extra_cc.strdup_strings = 1;
 	git_config(git_format_config, NULL);
 	init_revisions(&rev, prefix);
 	rev.commit_format = CMIT_FMT_EMAIL;
@@ -992,29 +1011,29 @@ int cmd_format_patch(int argc, const char **argv, const char *prefix)
 		add_signoff = xmemdupz(committer, endpos - committer + 1);
 	}
 
-	for (i = 0; i < extra_hdr_nr; i++) {
-		strbuf_addstr(&buf, extra_hdr[i]);
+	for (i = 0; i < extra_hdr.nr; i++) {
+		strbuf_addstr(&buf, extra_hdr.items[i].string);
 		strbuf_addch(&buf, '\n');
 	}
 
-	if (extra_to_nr)
+	if (extra_to.nr)
 		strbuf_addstr(&buf, "To: ");
-	for (i = 0; i < extra_to_nr; i++) {
+	for (i = 0; i < extra_to.nr; i++) {
 		if (i)
 			strbuf_addstr(&buf, "    ");
-		strbuf_addstr(&buf, extra_to[i]);
-		if (i + 1 < extra_to_nr)
+		strbuf_addstr(&buf, extra_to.items[i].string);
+		if (i + 1 < extra_to.nr)
 			strbuf_addch(&buf, ',');
 		strbuf_addch(&buf, '\n');
 	}
 
-	if (extra_cc_nr)
+	if (extra_cc.nr)
 		strbuf_addstr(&buf, "Cc: ");
-	for (i = 0; i < extra_cc_nr; i++) {
+	for (i = 0; i < extra_cc.nr; i++) {
 		if (i)
 			strbuf_addstr(&buf, "    ");
-		strbuf_addstr(&buf, extra_cc[i]);
-		if (i + 1 < extra_cc_nr)
+		strbuf_addstr(&buf, extra_cc.items[i].string);
+		if (i + 1 < extra_cc.nr)
 			strbuf_addch(&buf, ',');
 		strbuf_addch(&buf, '\n');
 	}
@@ -1223,6 +1242,9 @@ int cmd_format_patch(int argc, const char **argv, const char *prefix)
 			fclose(stdout);
 	}
 	free(list);
+	string_list_clear(&extra_to, 0);
+	string_list_clear(&extra_cc, 0);
+	string_list_clear(&extra_hdr, 0);
 	if (ignore_if_in_upstream)
 		free_patch_ids(&ids);
 	return 0;
diff --git a/builtin-ls-files.c b/builtin/ls-files.c
index b06506139..b06506139 100644
--- a/builtin-ls-files.c
+++ b/builtin/ls-files.c
diff --git a/builtin-ls-remote.c b/builtin/ls-remote.c
index 70f5622d9..70f5622d9 100644
--- a/builtin-ls-remote.c
+++ b/builtin/ls-remote.c
diff --git a/builtin-ls-tree.c b/builtin/ls-tree.c
index 4484185af..4484185af 100644
--- a/builtin-ls-tree.c
+++ b/builtin/ls-tree.c
diff --git a/builtin-mailinfo.c b/builtin/mailinfo.c
index a50ac2256..ce2ef6bed 100644
--- a/builtin-mailinfo.c
+++ b/builtin/mailinfo.c
@@ -779,8 +779,7 @@ static int handle_commit_msg(struct strbuf *line)
 		return 0;
 
 	if (still_looking) {
-		strbuf_ltrim(line);
-		if (!line->len)
+		if (!line->len || (line->len == 1 && line->buf[0] == '\n'))
 			return 0;
 	}
 
diff --git a/builtin-mailsplit.c b/builtin/mailsplit.c
index 207e358ed..cdfc1b704 100644
--- a/builtin-mailsplit.c
+++ b/builtin/mailsplit.c
@@ -10,7 +10,7 @@
 #include "strbuf.h"
 
 static const char git_mailsplit_usage[] =
-"git mailsplit [-d<prec>] [-f<n>] [-b] -o<directory> [<mbox>|<Maildir>...]";
+"git mailsplit [-d<prec>] [-f<n>] [-b] [--keep-cr] -o<directory> [<mbox>|<Maildir>...]";
 
 static int is_from_line(const char *line, int len)
 {
diff --git a/builtin-merge-base.c b/builtin/merge-base.c
index 54e7ec223..54e7ec223 100644
--- a/builtin-merge-base.c
+++ b/builtin/merge-base.c
diff --git a/builtin-merge-file.c b/builtin/merge-file.c
index 1e70073a7..69cc68333 100644
--- a/builtin-merge-file.c
+++ b/builtin/merge-file.c
@@ -27,30 +27,35 @@ int cmd_merge_file(int argc, const char **argv, const char *prefix)
 	mmbuffer_t result = {NULL, 0};
 	xmparam_t xmp = {{XDF_NEED_MINIMAL}};
 	int ret = 0, i = 0, to_stdout = 0;
-	int level = XDL_MERGE_ZEALOUS_ALNUM;
-	int style = 0, quiet = 0;
-	int favor = 0;
+	int quiet = 0;
 	int nongit;
-
 	struct option options[] = {
 		OPT_BOOLEAN('p', "stdout", &to_stdout, "send results to standard output"),
-		OPT_SET_INT(0, "diff3", &style, "use a diff3 based merge", XDL_MERGE_DIFF3),
-		OPT_SET_INT(0, "ours", &favor, "for conflicts, use our version",
+		OPT_SET_INT(0, "diff3", &xmp.style, "use a diff3 based merge", XDL_MERGE_DIFF3),
+		OPT_SET_INT(0, "ours", &xmp.favor, "for conflicts, use our version",
 			    XDL_MERGE_FAVOR_OURS),
-		OPT_SET_INT(0, "theirs", &favor, "for conflicts, use their version",
+		OPT_SET_INT(0, "theirs", &xmp.favor, "for conflicts, use their version",
 			    XDL_MERGE_FAVOR_THEIRS),
+		OPT_SET_INT(0, "union", &xmp.favor, "for conflicts, use a union version",
+			    XDL_MERGE_FAVOR_UNION),
+		OPT_INTEGER(0, "marker-size", &xmp.marker_size,
+			    "for conflicts, use this marker size"),
 		OPT__QUIET(&quiet),
 		OPT_CALLBACK('L', NULL, names, "name",
 			     "set labels for file1/orig_file/file2", &label_cb),
 		OPT_END(),
 	};
 
+	xmp.level = XDL_MERGE_ZEALOUS_ALNUM;
+	xmp.style = 0;
+	xmp.favor = 0;
+
 	prefix = setup_git_directory_gently(&nongit);
 	if (!nongit) {
 		/* Read the configuration file */
 		git_config(git_xmerge_config, NULL);
 		if (0 <= git_xmerge_style)
-			style = git_xmerge_style;
+			xmp.style = git_xmerge_style;
 	}
 
 	argc = parse_options(argc, argv, prefix, options, merge_file_usage, 0);
@@ -73,7 +78,7 @@ int cmd_merge_file(int argc, const char **argv, const char *prefix)
 	}
 
 	ret = xdl_merge(mmfs + 1, mmfs + 0, names[0], mmfs + 2, names[2],
-			&xmp, XDL_MERGE_FLAGS(level, style, favor), &result);
+			&xmp, &result);
 
 	for (i = 0; i < 3; i++)
 		free(mmfs[i].ptr);
diff --git a/builtin-merge-index.c b/builtin/merge-index.c
index 2c4cf5e55..2c4cf5e55 100644
--- a/builtin-merge-index.c
+++ b/builtin/merge-index.c
diff --git a/builtin-merge-ours.c b/builtin/merge-ours.c
index 684411694..684411694 100644
--- a/builtin-merge-ours.c
+++ b/builtin/merge-ours.c
diff --git a/builtin-merge-recursive.c b/builtin/merge-recursive.c
index d8875d589..d8875d589 100644
--- a/builtin-merge-recursive.c
+++ b/builtin/merge-recursive.c
diff --git a/builtin-merge-tree.c b/builtin/merge-tree.c
index a4a4f2ce4..a4a4f2ce4 100644
--- a/builtin-merge-tree.c
+++ b/builtin/merge-tree.c
diff --git a/builtin-merge.c b/builtin/merge.c
index 3aaec7bed..3aaec7bed 100644
--- a/builtin-merge.c
+++ b/builtin/merge.c
diff --git a/builtin-mktag.c b/builtin/mktag.c
index 1cb0f3f2a..1cb0f3f2a 100644
--- a/builtin-mktag.c
+++ b/builtin/mktag.c
diff --git a/builtin-mktree.c b/builtin/mktree.c
index 098395fda..098395fda 100644
--- a/builtin-mktree.c
+++ b/builtin/mktree.c
diff --git a/builtin-mv.c b/builtin/mv.c
index c07f53b34..c07f53b34 100644
--- a/builtin-mv.c
+++ b/builtin/mv.c
diff --git a/builtin-name-rev.c b/builtin/name-rev.c
index 06a38ac8c..06a38ac8c 100644
--- a/builtin-name-rev.c
+++ b/builtin/name-rev.c
diff --git a/builtin/notes.c b/builtin/notes.c
new file mode 100644
index 000000000..feb710ac4
--- /dev/null
+++ b/builtin/notes.c
@@ -0,0 +1,455 @@
+/*
+ * Builtin "git notes"
+ *
+ * Copyright (c) 2010 Johan Herland <johan@herland.net>
+ *
+ * Based on git-notes.sh by Johannes Schindelin,
+ * and builtin-tag.c by Kristian Høgsberg and Carlos Rica.
+ */
+
+#include "cache.h"
+#include "builtin.h"
+#include "notes.h"
+#include "blob.h"
+#include "commit.h"
+#include "refs.h"
+#include "exec_cmd.h"
+#include "run-command.h"
+#include "parse-options.h"
+
+static const char * const git_notes_usage[] = {
+	"git notes [list [<object>]]",
+	"git notes add [-f] [-m <msg> | -F <file> | (-c | -C) <object>] [<object>]",
+	"git notes copy [-f] <from-object> <to-object>",
+	"git notes append [-m <msg> | -F <file> | (-c | -C) <object>] [<object>]",
+	"git notes edit [<object>]",
+	"git notes show [<object>]",
+	"git notes remove [<object>]",
+	"git notes prune",
+	NULL
+};
+
+static const char note_template[] =
+	"\n"
+	"#\n"
+	"# Write/edit the notes for the following object:\n"
+	"#\n";
+
+struct msg_arg {
+	int given;
+	int use_editor;
+	struct strbuf buf;
+};
+
+static int list_each_note(const unsigned char *object_sha1,
+		const unsigned char *note_sha1, char *note_path,
+		void *cb_data)
+{
+	printf("%s %s\n", sha1_to_hex(note_sha1), sha1_to_hex(object_sha1));
+	return 0;
+}
+
+static void write_note_data(int fd, const unsigned char *sha1)
+{
+	unsigned long size;
+	enum object_type type;
+	char *buf = read_sha1_file(sha1, &type, &size);
+	if (buf) {
+		if (size)
+			write_or_die(fd, buf, size);
+		free(buf);
+	}
+}
+
+static void write_commented_object(int fd, const unsigned char *object)
+{
+	const char *show_args[5] =
+		{"show", "--stat", "--no-notes", sha1_to_hex(object), NULL};
+	struct child_process show;
+	struct strbuf buf = STRBUF_INIT;
+	FILE *show_out;
+
+	/* Invoke "git show --stat --no-notes $object" */
+	memset(&show, 0, sizeof(show));
+	show.argv = show_args;
+	show.no_stdin = 1;
+	show.out = -1;
+	show.err = 0;
+	show.git_cmd = 1;
+	if (start_command(&show))
+		die("unable to start 'show' for object '%s'",
+		    sha1_to_hex(object));
+
+	/* Open the output as FILE* so strbuf_getline() can be used. */
+	show_out = xfdopen(show.out, "r");
+	if (show_out == NULL)
+		die_errno("can't fdopen 'show' output fd");
+
+	/* Prepend "# " to each output line and write result to 'fd' */
+	while (strbuf_getline(&buf, show_out, '\n') != EOF) {
+		write_or_die(fd, "# ", 2);
+		write_or_die(fd, buf.buf, buf.len);
+		write_or_die(fd, "\n", 1);
+	}
+	strbuf_release(&buf);
+	if (fclose(show_out))
+		die_errno("failed to close pipe to 'show' for object '%s'",
+			  sha1_to_hex(object));
+	if (finish_command(&show))
+		die("failed to finish 'show' for object '%s'",
+		    sha1_to_hex(object));
+}
+
+static void create_note(const unsigned char *object, struct msg_arg *msg,
+			int append_only, const unsigned char *prev,
+			unsigned char *result)
+{
+	char *path = NULL;
+
+	if (msg->use_editor || !msg->given) {
+		int fd;
+
+		/* write the template message before editing: */
+		path = git_pathdup("NOTES_EDITMSG");
+		fd = open(path, O_CREAT | O_TRUNC | O_WRONLY, 0600);
+		if (fd < 0)
+			die_errno("could not create file '%s'", path);
+
+		if (msg->given)
+			write_or_die(fd, msg->buf.buf, msg->buf.len);
+		else if (prev && !append_only)
+			write_note_data(fd, prev);
+		write_or_die(fd, note_template, strlen(note_template));
+
+		write_commented_object(fd, object);
+
+		close(fd);
+		strbuf_reset(&(msg->buf));
+
+		if (launch_editor(path, &(msg->buf), NULL)) {
+			die("Please supply the note contents using either -m" \
+			    " or -F option");
+		}
+		stripspace(&(msg->buf), 1);
+	}
+
+	if (prev && append_only) {
+		/* Append buf to previous note contents */
+		unsigned long size;
+		enum object_type type;
+		char *prev_buf = read_sha1_file(prev, &type, &size);
+
+		strbuf_grow(&(msg->buf), size + 1);
+		if (msg->buf.len && prev_buf && size)
+			strbuf_insert(&(msg->buf), 0, "\n", 1);
+		if (prev_buf && size)
+			strbuf_insert(&(msg->buf), 0, prev_buf, size);
+		free(prev_buf);
+	}
+
+	if (!msg->buf.len) {
+		fprintf(stderr, "Removing note for object %s\n",
+			sha1_to_hex(object));
+		hashclr(result);
+	} else {
+		if (write_sha1_file(msg->buf.buf, msg->buf.len, blob_type, result)) {
+			error("unable to write note object");
+			if (path)
+				error("The note contents has been left in %s",
+				      path);
+			exit(128);
+		}
+	}
+
+	if (path) {
+		unlink_or_warn(path);
+		free(path);
+	}
+}
+
+static int parse_msg_arg(const struct option *opt, const char *arg, int unset)
+{
+	struct msg_arg *msg = opt->value;
+
+	strbuf_grow(&(msg->buf), strlen(arg) + 2);
+	if (msg->buf.len)
+		strbuf_addch(&(msg->buf), '\n');
+	strbuf_addstr(&(msg->buf), arg);
+	stripspace(&(msg->buf), 0);
+
+	msg->given = 1;
+	return 0;
+}
+
+static int parse_file_arg(const struct option *opt, const char *arg, int unset)
+{
+	struct msg_arg *msg = opt->value;
+
+	if (msg->buf.len)
+		strbuf_addch(&(msg->buf), '\n');
+	if (!strcmp(arg, "-")) {
+		if (strbuf_read(&(msg->buf), 0, 1024) < 0)
+			die_errno("cannot read '%s'", arg);
+	} else if (strbuf_read_file(&(msg->buf), arg, 1024) < 0)
+		die_errno("could not open or read '%s'", arg);
+	stripspace(&(msg->buf), 0);
+
+	msg->given = 1;
+	return 0;
+}
+
+static int parse_reuse_arg(const struct option *opt, const char *arg, int unset)
+{
+	struct msg_arg *msg = opt->value;
+	char *buf;
+	unsigned char object[20];
+	enum object_type type;
+	unsigned long len;
+
+	if (msg->buf.len)
+		strbuf_addch(&(msg->buf), '\n');
+
+	if (get_sha1(arg, object))
+		die("Failed to resolve '%s' as a valid ref.", arg);
+	if (!(buf = read_sha1_file(object, &type, &len)) || !len) {
+		free(buf);
+		die("Failed to read object '%s'.", arg);;
+	}
+	strbuf_add(&(msg->buf), buf, len);
+	free(buf);
+
+	msg->given = 1;
+	return 0;
+}
+
+static int parse_reedit_arg(const struct option *opt, const char *arg, int unset)
+{
+	struct msg_arg *msg = opt->value;
+	msg->use_editor = 1;
+	return parse_reuse_arg(opt, arg, unset);
+}
+
+int commit_notes(struct notes_tree *t, const char *msg)
+{
+	struct commit_list *parent;
+	unsigned char tree_sha1[20], prev_commit[20], new_commit[20];
+	struct strbuf buf = STRBUF_INIT;
+
+	if (!t)
+		t = &default_notes_tree;
+	if (!t->initialized || !t->ref || !*t->ref)
+		die("Cannot commit uninitialized/unreferenced notes tree");
+
+	/* Prepare commit message and reflog message */
+	strbuf_addstr(&buf, "notes: "); /* commit message starts at index 7 */
+	strbuf_addstr(&buf, msg);
+	if (buf.buf[buf.len - 1] != '\n')
+		strbuf_addch(&buf, '\n'); /* Make sure msg ends with newline */
+
+	/* Convert notes tree to tree object */
+	if (write_notes_tree(t, tree_sha1))
+		die("Failed to write current notes tree to database");
+
+	/* Create new commit for the tree object */
+	if (!read_ref(t->ref, prev_commit)) { /* retrieve parent commit */
+		parent = xmalloc(sizeof(*parent));
+		parent->item = lookup_commit(prev_commit);
+		parent->next = NULL;
+	} else {
+		hashclr(prev_commit);
+		parent = NULL;
+	}
+	if (commit_tree(buf.buf + 7, tree_sha1, parent, new_commit, NULL))
+		die("Failed to commit notes tree to database");
+
+	/* Update notes ref with new commit */
+	update_ref(buf.buf, t->ref, new_commit, prev_commit, 0, DIE_ON_ERR);
+
+	strbuf_release(&buf);
+	return 0;
+}
+
+int cmd_notes(int argc, const char **argv, const char *prefix)
+{
+	struct notes_tree *t;
+	unsigned char object[20], from_obj[20], new_note[20];
+	const unsigned char *note;
+	const char *object_ref;
+	char logmsg[100];
+
+	int list = 0, add = 0, copy = 0, append = 0, edit = 0, show = 0,
+	    remove = 0, prune = 0, force = 0;
+	int given_object = 0, i = 1, retval = 0;
+	struct msg_arg msg = { 0, 0, STRBUF_INIT };
+	struct option options[] = {
+		OPT_GROUP("Notes contents options"),
+		{ OPTION_CALLBACK, 'm', "message", &msg, "MSG",
+			"note contents as a string", PARSE_OPT_NONEG,
+			parse_msg_arg},
+		{ OPTION_CALLBACK, 'F', "file", &msg, "FILE",
+			"note contents in a file", PARSE_OPT_NONEG,
+			parse_file_arg},
+		{ OPTION_CALLBACK, 'c', "reedit-message", &msg, "OBJECT",
+			"reuse and edit specified note object", PARSE_OPT_NONEG,
+			parse_reedit_arg},
+		{ OPTION_CALLBACK, 'C', "reuse-message", &msg, "OBJECT",
+			"reuse specified note object", PARSE_OPT_NONEG,
+			parse_reuse_arg},
+		OPT_GROUP("Other options"),
+		OPT_BOOLEAN('f', "force", &force, "replace existing notes"),
+		OPT_END()
+	};
+
+	git_config(git_default_config, NULL);
+
+	argc = parse_options(argc, argv, prefix, options, git_notes_usage, 0);
+
+	if (argc && !strcmp(argv[0], "list"))
+		list = 1;
+	else if (argc && !strcmp(argv[0], "add"))
+		add = 1;
+	else if (argc && !strcmp(argv[0], "copy"))
+		copy = 1;
+	else if (argc && !strcmp(argv[0], "append"))
+		append = 1;
+	else if (argc && !strcmp(argv[0], "edit"))
+		edit = 1;
+	else if (argc && !strcmp(argv[0], "show"))
+		show = 1;
+	else if (argc && !strcmp(argv[0], "remove"))
+		remove = 1;
+	else if (argc && !strcmp(argv[0], "prune"))
+		prune = 1;
+	else if (!argc) {
+		list = 1; /* Default to 'list' if no other subcommand given */
+		i = 0;
+	}
+
+	if (list + add + copy + append + edit + show + remove + prune != 1)
+		usage_with_options(git_notes_usage, options);
+
+	if (msg.given && !(add || append || edit)) {
+		error("cannot use -m/-F/-c/-C options with %s subcommand.",
+		      argv[0]);
+		usage_with_options(git_notes_usage, options);
+	}
+
+	if (msg.given && edit) {
+		fprintf(stderr, "The -m/-F/-c/-C options have been deprecated "
+			"for the 'edit' subcommand.\n"
+			"Please use 'git notes add -f -m/-F/-c/-C' instead.\n");
+	}
+
+	if (force && !(add || copy)) {
+		error("cannot use -f option with %s subcommand.", argv[0]);
+		usage_with_options(git_notes_usage, options);
+	}
+
+	if (copy) {
+		const char *from_ref;
+		if (argc < 3) {
+			error("too few parameters");
+			usage_with_options(git_notes_usage, options);
+		}
+		from_ref = argv[i++];
+		if (get_sha1(from_ref, from_obj))
+			die("Failed to resolve '%s' as a valid ref.", from_ref);
+	}
+
+	given_object = argc > i;
+	object_ref = given_object ? argv[i++] : "HEAD";
+
+	if (argc > i || (prune && given_object)) {
+		error("too many parameters");
+		usage_with_options(git_notes_usage, options);
+	}
+
+	if (get_sha1(object_ref, object))
+		die("Failed to resolve '%s' as a valid ref.", object_ref);
+
+	init_notes(NULL, NULL, NULL, 0);
+	t = &default_notes_tree;
+
+	if (prefixcmp(t->ref, "refs/notes/"))
+		die("Refusing to %s notes in %s (outside of refs/notes/)",
+		    argv[0], t->ref);
+
+	note = get_note(t, object);
+
+	/* list command */
+
+	if (list) {
+		if (given_object) {
+			if (note) {
+				puts(sha1_to_hex(note));
+				goto end;
+			}
+		} else {
+			retval = for_each_note(t, 0, list_each_note, NULL);
+			goto end;
+		}
+	}
+
+	/* show command */
+
+	if ((list || show) && !note) {
+		error("No note found for object %s.", sha1_to_hex(object));
+		retval = 1;
+		goto end;
+	} else if (show) {
+		const char *show_args[3] = {"show", sha1_to_hex(note), NULL};
+		retval = execv_git_cmd(show_args);
+		goto end;
+	}
+
+	/* add/append/edit/remove/prune command */
+
+	if ((add || copy) && note) {
+		if (!force) {
+			error("Cannot %s notes. Found existing notes for object"
+			      " %s. Use '-f' to overwrite existing notes",
+			      argv[0], sha1_to_hex(object));
+			retval = 1;
+			goto end;
+		}
+		fprintf(stderr, "Overwriting existing notes for object %s\n",
+			sha1_to_hex(object));
+	}
+
+	if (remove) {
+		msg.given = 1;
+		msg.use_editor = 0;
+		strbuf_reset(&(msg.buf));
+	}
+
+	if (prune) {
+		hashclr(new_note);
+		prune_notes(t);
+		goto commit;
+	} else if (copy) {
+		const unsigned char *from_note = get_note(t, from_obj);
+		if (!from_note) {
+			error("Missing notes on source object %s. Cannot copy.",
+			      sha1_to_hex(from_obj));
+			retval = 1;
+			goto end;
+		}
+		hashcpy(new_note, from_note);
+	} else
+		create_note(object, &msg, append, note, new_note);
+
+	if (is_null_sha1(new_note))
+		remove_note(t, object);
+	else
+		add_note(t, object, new_note, combine_notes_overwrite);
+
+commit:
+	snprintf(logmsg, sizeof(logmsg), "Notes %s by 'git notes %s'",
+		 is_null_sha1(new_note) ? "removed" : "added", argv[0]);
+	commit_notes(t, logmsg);
+
+end:
+	free_notes(t);
+	strbuf_release(&(msg.buf));
+	return retval;
+}
diff --git a/builtin-pack-objects.c b/builtin/pack-objects.c
index e1d3adf40..97802585e 100644
--- a/builtin-pack-objects.c
+++ b/builtin/pack-objects.c
@@ -155,33 +155,6 @@ static unsigned long do_compress(void **pptr, unsigned long size)
 }
 
 /*
- * The per-object header is a pretty dense thing, which is
- *  - first byte: low four bits are "size", then three bits of "type",
- *    and the high bit is "size continues".
- *  - each byte afterwards: low seven bits are size continuation,
- *    with the high bit being "size continues"
- */
-static int encode_header(enum object_type type, unsigned long size, unsigned char *hdr)
-{
-	int n = 1;
-	unsigned char c;
-
-	if (type < OBJ_COMMIT || type > OBJ_REF_DELTA)
-		die("bad type %d", type);
-
-	c = (type << 4) | (size & 15);
-	size >>= 4;
-	while (size) {
-		*hdr++ = c | 0x80;
-		c = size & 0x7f;
-		size >>= 7;
-		n++;
-	}
-	*hdr = c;
-	return n;
-}
-
-/*
  * we are going to reuse the existing object data as is.  make
  * sure it is not corrupt.
  */
@@ -321,7 +294,7 @@ static unsigned long write_object(struct sha1file *f,
 		 * The object header is a byte of 'type' followed by zero or
 		 * more bytes of length.
 		 */
-		hdrlen = encode_header(type, size, header);
+		hdrlen = encode_in_pack_object_header(type, size, header);
 
 		if (type == OBJ_OFS_DELTA) {
 			/*
@@ -372,7 +345,7 @@ static unsigned long write_object(struct sha1file *f,
 		if (entry->delta)
 			type = (allow_ofs_delta && entry->delta->idx.offset) ?
 				OBJ_OFS_DELTA : OBJ_REF_DELTA;
-		hdrlen = encode_header(type, entry->size, header);
+		hdrlen = encode_in_pack_object_header(type, entry->size, header);
 
 		offset = entry->in_pack_offset;
 		revidx = find_pack_revindex(p, offset);
@@ -464,9 +437,6 @@ static int write_one(struct sha1file *f,
 	return 1;
 }
 
-/* forward declaration for write_pack_file */
-static int adjust_perm(const char *path, mode_t mode);
-
 static void write_pack_file(void)
 {
 	uint32_t i = 0, j;
@@ -523,21 +493,17 @@ static void write_pack_file(void)
 		}
 
 		if (!pack_to_stdout) {
-			mode_t mode = umask(0);
 			struct stat st;
 			const char *idx_tmp_name;
 			char tmpname[PATH_MAX];
 
-			umask(mode);
-			mode = 0444 & ~mode;
-
 			idx_tmp_name = write_idx_file(NULL, written_list,
 						      nr_written, sha1);
 
 			snprintf(tmpname, sizeof(tmpname), "%s-%s.pack",
 				 base_name, sha1_to_hex(sha1));
 			free_pack_by_name(tmpname);
-			if (adjust_perm(pack_tmp_name, mode))
+			if (adjust_shared_perm(pack_tmp_name))
 				die_errno("unable to make temporary pack file readable");
 			if (rename(pack_tmp_name, tmpname))
 				die_errno("unable to rename temporary pack file");
@@ -565,7 +531,7 @@ static void write_pack_file(void)
 
 			snprintf(tmpname, sizeof(tmpname), "%s-%s.idx",
 				 base_name, sha1_to_hex(sha1));
-			if (adjust_perm(idx_tmp_name, mode))
+			if (adjust_shared_perm(idx_tmp_name))
 				die_errno("unable to make temporary index file readable");
 			if (rename(idx_tmp_name, tmpname))
 				die_errno("unable to rename temporary index file");
@@ -2125,13 +2091,6 @@ static void get_object_list(int ac, const char **av)
 		loosen_unused_packed_objects(&revs);
 }
 
-static int adjust_perm(const char *path, mode_t mode)
-{
-	if (chmod(path, mode))
-		return -1;
-	return adjust_shared_perm(path);
-}
-
 int cmd_pack_objects(int argc, const char **argv, const char *prefix)
 {
 	int use_internal_rev_list = 0;
diff --git a/builtin-pack-redundant.c b/builtin/pack-redundant.c
index 41e1615a2..41e1615a2 100644
--- a/builtin-pack-redundant.c
+++ b/builtin/pack-redundant.c
diff --git a/builtin-pack-refs.c b/builtin/pack-refs.c
index 091860b2e..091860b2e 100644
--- a/builtin-pack-refs.c
+++ b/builtin/pack-refs.c
diff --git a/builtin-patch-id.c b/builtin/patch-id.c
index af0911e4b..af0911e4b 100644
--- a/builtin-patch-id.c
+++ b/builtin/patch-id.c
diff --git a/builtin-prune-packed.c b/builtin/prune-packed.c
index f9463deec..f9463deec 100644
--- a/builtin-prune-packed.c
+++ b/builtin/prune-packed.c
diff --git a/builtin-prune.c b/builtin/prune.c
index 4675f6054..81f915ec3 100644
--- a/builtin-prune.c
+++ b/builtin/prune.c
@@ -18,13 +18,11 @@ static unsigned long expire;
 static int prune_tmp_object(const char *path, const char *filename)
 {
 	const char *fullpath = mkpath("%s/%s", path, filename);
-	if (expire) {
-		struct stat st;
-		if (lstat(fullpath, &st))
-			return error("Could not stat '%s'", fullpath);
-		if (st.st_mtime > expire)
-			return 0;
-	}
+	struct stat st;
+	if (lstat(fullpath, &st))
+		return error("Could not stat '%s'", fullpath);
+	if (st.st_mtime > expire)
+		return 0;
 	printf("Removing stale temporary file %s\n", fullpath);
 	if (!show_only)
 		unlink_or_warn(fullpath);
@@ -34,13 +32,11 @@ static int prune_tmp_object(const char *path, const char *filename)
 static int prune_object(char *path, const char *filename, const unsigned char *sha1)
 {
 	const char *fullpath = mkpath("%s/%s", path, filename);
-	if (expire) {
-		struct stat st;
-		if (lstat(fullpath, &st))
-			return error("Could not stat '%s'", fullpath);
-		if (st.st_mtime > expire)
-			return 0;
-	}
+	struct stat st;
+	if (lstat(fullpath, &st))
+		return error("Could not stat '%s'", fullpath);
+	if (st.st_mtime > expire)
+		return 0;
 	if (show_only || verbose) {
 		enum object_type type = sha1_object_info(sha1, NULL);
 		printf("%s %s\n", sha1_to_hex(sha1),
@@ -139,6 +135,7 @@ int cmd_prune(int argc, const char **argv, const char *prefix)
 	};
 	char *s;
 
+	expire = ULONG_MAX;
 	save_commit_buffer = 0;
 	read_replace_refs = 0;
 	init_revisions(&revs, prefix);
diff --git a/builtin-push.c b/builtin/push.c
index 5633f0ade..62957eded 100644
--- a/builtin-push.c
+++ b/builtin/push.c
@@ -17,6 +17,8 @@ static const char * const push_usage[] = {
 static int thin;
 static int deleterefs;
 static const char *receivepack;
+static int verbosity;
+static int progress;
 
 static const char **refspec;
 static int refspec_nr;
@@ -68,7 +70,7 @@ static void setup_push_tracking(void)
 	struct branch *branch = branch_get(NULL);
 	if (!branch)
 		die("You are not currently on a branch.");
-	if (!branch->merge_nr)
+	if (!branch->merge_nr || !branch->merge)
 		die("The current branch %s is not tracking anything.",
 		    branch->name);
 	if (branch->merge_nr != 1)
@@ -105,13 +107,16 @@ static int push_with_options(struct transport *transport, int flags)
 {
 	int err;
 	int nonfastforward;
+
+	transport_set_verbosity(transport, verbosity, progress);
+
 	if (receivepack)
 		transport_set_option(transport,
 				     TRANS_OPT_RECEIVEPACK, receivepack);
 	if (thin)
 		transport_set_option(transport, TRANS_OPT_THIN, "yes");
 
-	if (flags & TRANSPORT_PUSH_VERBOSE)
+	if (verbosity > 0)
 		fprintf(stderr, "Pushing to %s\n", transport->url);
 	err = transport_push(transport, refspec_nr, refspec, flags,
 			     &nonfastforward);
@@ -124,9 +129,9 @@ static int push_with_options(struct transport *transport, int flags)
 		return 0;
 
 	if (nonfastforward && advice_push_nonfastforward) {
-		printf("To prevent you from losing history, non-fast-forward updates were rejected\n"
-		       "Merge the remote changes before pushing again.  See the 'Note about\n"
-		       "fast-forwards' section of 'git push --help' for details.\n");
+		fprintf(stderr, "To prevent you from losing history, non-fast-forward updates were rejected\n"
+				"Merge the remote changes before pushing again.  See the 'Note about\n"
+				"fast-forwards' section of 'git push --help' for details.\n");
 	}
 
 	return 1;
@@ -204,8 +209,7 @@ int cmd_push(int argc, const char **argv, const char *prefix)
 	int rc;
 	const char *repo = NULL;	/* default repository */
 	struct option options[] = {
-		OPT_BIT('q', "quiet", &flags, "be quiet", TRANSPORT_PUSH_QUIET),
-		OPT_BIT('v', "verbose", &flags, "be verbose", TRANSPORT_PUSH_VERBOSE),
+		OPT__VERBOSITY(&verbosity),
 		OPT_STRING( 0 , "repo", &repo, "repository", "repository"),
 		OPT_BIT( 0 , "all", &flags, "push all refs", TRANSPORT_PUSH_ALL),
 		OPT_BIT( 0 , "mirror", &flags, "mirror all refs",
@@ -220,6 +224,7 @@ int cmd_push(int argc, const char **argv, const char *prefix)
 		OPT_STRING( 0 , "exec", &receivepack, "receive-pack", "receive pack program"),
 		OPT_BIT('u', "set-upstream", &flags, "set upstream for git pull/status",
 			TRANSPORT_PUSH_SET_UPSTREAM),
+		OPT_BOOLEAN(0, "progress", &progress, "force progress reporting"),
 		OPT_END()
 	};
 
diff --git a/builtin-read-tree.c b/builtin/read-tree.c
index 8bdcab113..8bdcab113 100644
--- a/builtin-read-tree.c
+++ b/builtin/read-tree.c
diff --git a/builtin-receive-pack.c b/builtin/receive-pack.c
index 0559fcc87..0559fcc87 100644
--- a/builtin-receive-pack.c
+++ b/builtin/receive-pack.c
diff --git a/builtin-reflog.c b/builtin/reflog.c
index 749821078..64e45bd81 100644
--- a/builtin-reflog.c
+++ b/builtin/reflog.c
@@ -530,16 +530,14 @@ static int cmd_reflog_expire(int argc, const char **argv, const char *prefix)
 	int i, status, do_all;
 	int explicit_expiry = 0;
 
+	default_reflog_expire_unreachable = now - 30 * 24 * 3600;
+	default_reflog_expire = now - 90 * 24 * 3600;
 	git_config(reflog_expire_config, NULL);
 
 	save_commit_buffer = 0;
 	do_all = status = 0;
 	memset(&cb, 0, sizeof(cb));
 
-	if (!default_reflog_expire_unreachable)
-		default_reflog_expire_unreachable = now - 30 * 24 * 3600;
-	if (!default_reflog_expire)
-		default_reflog_expire = now - 90 * 24 * 3600;
 	cb.expire_total = default_reflog_expire;
 	cb.expire_unreachable = default_reflog_expire_unreachable;
 
diff --git a/builtin-remote.c b/builtin/remote.c
index 277765b86..277765b86 100644
--- a/builtin-remote.c
+++ b/builtin/remote.c
diff --git a/builtin-replace.c b/builtin/replace.c
index fe3a647a3..fe3a647a3 100644
--- a/builtin-replace.c
+++ b/builtin/replace.c
diff --git a/builtin-rerere.c b/builtin/rerere.c
index 34f9acee9..34f9acee9 100644
--- a/builtin-rerere.c
+++ b/builtin/rerere.c
diff --git a/builtin-reset.c b/builtin/reset.c
index 0f5022eed..2c3a69adc 100644
--- a/builtin-reset.c
+++ b/builtin/reset.c
@@ -22,13 +22,15 @@
 #include "cache-tree.h"
 
 static const char * const git_reset_usage[] = {
-	"git reset [--mixed | --soft | --hard | --merge] [-q] [<commit>]",
+	"git reset [--mixed | --soft | --hard | --merge | --keep] [-q] [<commit>]",
 	"git reset [--mixed] <commit> [--] <paths>...",
 	NULL
 };
 
-enum reset_type { MIXED, SOFT, HARD, MERGE, NONE };
-static const char *reset_type_names[] = { "mixed", "soft", "hard", "merge", NULL };
+enum reset_type { MIXED, SOFT, HARD, MERGE, KEEP, NONE };
+static const char *reset_type_names[] = {
+	"mixed", "soft", "hard", "merge", "keep", NULL
+};
 
 static char *args_to_str(const char **argv)
 {
@@ -71,6 +73,7 @@ static int reset_index_file(const unsigned char *sha1, int reset_type, int quiet
 	if (!quiet)
 		opts.verbose_update = 1;
 	switch (reset_type) {
+	case KEEP:
 	case MERGE:
 		opts.update = 1;
 		break;
@@ -85,6 +88,16 @@ static int reset_index_file(const unsigned char *sha1, int reset_type, int quiet
 
 	read_cache_unmerged();
 
+	if (reset_type == KEEP) {
+		unsigned char head_sha1[20];
+		if (get_sha1("HEAD", head_sha1))
+			return error("You do not have a valid HEAD.");
+		if (!fill_tree_descriptor(desc, head_sha1))
+			return error("Failed to find tree of HEAD.");
+		nr++;
+		opts.fn = twoway_merge;
+	}
+
 	if (!fill_tree_descriptor(desc + nr - 1, sha1))
 		return error("Failed to find tree of %s.", sha1_to_hex(sha1));
 	if (unpack_trees(nr, desc, &opts))
@@ -211,6 +224,14 @@ static void prepend_reflog_action(const char *action, char *buf, size_t size)
 		warning("Reflog action message too long: %.*s...", 50, buf);
 }
 
+static void die_if_unmerged_cache(int reset_type)
+{
+	if (is_merge() || read_cache() < 0 || unmerged_cache())
+		die("Cannot do a %s reset in the middle of a merge.",
+		    reset_type_names[reset_type]);
+
+}
+
 int cmd_reset(int argc, const char **argv, const char *prefix)
 {
 	int i = 0, reset_type = NONE, update_ref_status = 0, quiet = 0;
@@ -229,6 +250,8 @@ int cmd_reset(int argc, const char **argv, const char *prefix)
 				"reset HEAD, index and working tree", HARD),
 		OPT_SET_INT(0, "merge", &reset_type,
 				"reset HEAD, index and working tree", MERGE),
+		OPT_SET_INT(0, "keep", &reset_type,
+				"reset HEAD but keep local changes", KEEP),
 		OPT_BOOLEAN('p', "patch", &patch_mode, "select hunks interactively"),
 		OPT_END()
 	};
@@ -304,7 +327,7 @@ int cmd_reset(int argc, const char **argv, const char *prefix)
 	if (reset_type == NONE)
 		reset_type = MIXED; /* by default */
 
-	if (reset_type == HARD || reset_type == MERGE)
+	if (reset_type != SOFT && reset_type != MIXED)
 		setup_work_tree();
 
 	if (reset_type == MIXED && is_bare_repository())
@@ -314,12 +337,18 @@ int cmd_reset(int argc, const char **argv, const char *prefix)
 	/* Soft reset does not touch the index file nor the working tree
 	 * at all, but requires them in a good order.  Other resets reset
 	 * the index file to the tree object we are switching to. */
-	if (reset_type == SOFT) {
-		if (is_merge() || read_cache() < 0 || unmerged_cache())
-			die("Cannot do a soft reset in the middle of a merge.");
+	if (reset_type == SOFT)
+		die_if_unmerged_cache(reset_type);
+	else {
+		int err;
+		if (reset_type == KEEP)
+			die_if_unmerged_cache(reset_type);
+		err = reset_index_file(sha1, reset_type, quiet);
+		if (reset_type == KEEP)
+			err = err || reset_index_file(sha1, MIXED, quiet);
+		if (err)
+			die("Could not reset index file to revision '%s'.", rev);
 	}
-	else if (reset_index_file(sha1, reset_type, quiet))
-		die("Could not reset index file to revision '%s'.", rev);
 
 	/* Any resets update HEAD to the head being switched to,
 	 * saving the previous head in ORIG_HEAD before. */
diff --git a/builtin-rev-list.c b/builtin/rev-list.c
index c924b3a2c..5679170e8 100644
--- a/builtin-rev-list.c
+++ b/builtin/rev-list.c
@@ -371,8 +371,9 @@ int cmd_rev_list(int argc, const char **argv, const char *prefix)
 	    revs.diff)
 		usage(rev_list_usage);
 
-	save_commit_buffer = revs.verbose_header ||
-		revs.grep_filter.pattern_list;
+	save_commit_buffer = (revs.verbose_header ||
+			      revs.grep_filter.pattern_list ||
+			      revs.grep_filter.header_list);
 	if (bisect_list)
 		revs.limited = 1;
 
diff --git a/builtin-rev-parse.c b/builtin/rev-parse.c
index a8c5043de..8fbf9d0db 100644
--- a/builtin-rev-parse.c
+++ b/builtin/rev-parse.c
@@ -455,6 +455,13 @@ int cmd_rev_parse(int argc, const char **argv, const char *prefix)
 	if (argc > 1 && !strcmp("--sq-quote", argv[1]))
 		return cmd_sq_quote(argc - 2, argv + 2);
 
+	if (argc == 2 && !strcmp("--local-env-vars", argv[1])) {
+		int i;
+		for (i = 0; local_repo_env[i]; i++)
+			printf("%s\n", local_repo_env[i]);
+		return 0;
+	}
+
 	if (argc > 1 && !strcmp("-h", argv[1]))
 		usage(builtin_rev_parse_usage);
 
@@ -637,6 +644,7 @@ int cmd_rev_parse(int argc, const char **argv, const char *prefix)
 			if (!strcmp(arg, "--git-dir")) {
 				const char *gitdir = getenv(GIT_DIR_ENVIRONMENT);
 				static char cwd[PATH_MAX];
+				int len;
 				if (gitdir) {
 					puts(gitdir);
 					continue;
@@ -647,7 +655,8 @@ int cmd_rev_parse(int argc, const char **argv, const char *prefix)
 				}
 				if (!getcwd(cwd, PATH_MAX))
 					die_errno("unable to get current working directory");
-				printf("%s/.git\n", cwd);
+				len = strlen(cwd);
+				printf("%s%s.git\n", cwd, len && cwd[len-1] != '/' ? "/" : "");
 				continue;
 			}
 			if (!strcmp(arg, "--is-inside-git-dir")) {
diff --git a/builtin-revert.c b/builtin/revert.c
index eff52687a..eff52687a 100644
--- a/builtin-revert.c
+++ b/builtin/revert.c
diff --git a/builtin-rm.c b/builtin/rm.c
index f3772c84d..f3772c84d 100644
--- a/builtin-rm.c
+++ b/builtin/rm.c
diff --git a/builtin-send-pack.c b/builtin/send-pack.c
index 2183a4705..481602d8a 100644
--- a/builtin-send-pack.c
+++ b/builtin/send-pack.c
@@ -7,6 +7,7 @@
 #include "remote.h"
 #include "send-pack.h"
 #include "quote.h"
+#include "transport.h"
 
 static const char send_pack_usage[] =
 "git send-pack [--all | --mirror] [--dry-run] [--force] [--receive-pack=<git-receive-pack>] [--verbose] [--thin] [<host>:]<directory> [<ref>...]\n"
@@ -169,156 +170,6 @@ static int receive_status(int in, struct ref *refs)
 	return ret;
 }
 
-static void update_tracking_ref(struct remote *remote, struct ref *ref)
-{
-	struct refspec rs;
-
-	if (ref->status != REF_STATUS_OK && ref->status != REF_STATUS_UPTODATE)
-		return;
-
-	rs.src = ref->name;
-	rs.dst = NULL;
-
-	if (!remote_find_tracking(remote, &rs)) {
-		if (args.verbose)
-			fprintf(stderr, "updating local tracking ref '%s'\n", rs.dst);
-		if (ref->deletion) {
-			delete_ref(rs.dst, NULL, 0);
-		} else
-			update_ref("update by push", rs.dst,
-					ref->new_sha1, NULL, 0, 0);
-		free(rs.dst);
-	}
-}
-
-#define SUMMARY_WIDTH (2 * DEFAULT_ABBREV + 3)
-
-static void print_ref_status(char flag, const char *summary, struct ref *to, struct ref *from, const char *msg)
-{
-	fprintf(stderr, " %c %-*s ", flag, SUMMARY_WIDTH, summary);
-	if (from)
-		fprintf(stderr, "%s -> %s", prettify_refname(from->name), prettify_refname(to->name));
-	else
-		fputs(prettify_refname(to->name), stderr);
-	if (msg) {
-		fputs(" (", stderr);
-		fputs(msg, stderr);
-		fputc(')', stderr);
-	}
-	fputc('\n', stderr);
-}
-
-static const char *status_abbrev(unsigned char sha1[20])
-{
-	return find_unique_abbrev(sha1, DEFAULT_ABBREV);
-}
-
-static void print_ok_ref_status(struct ref *ref)
-{
-	if (ref->deletion)
-		print_ref_status('-', "[deleted]", ref, NULL, NULL);
-	else if (is_null_sha1(ref->old_sha1))
-		print_ref_status('*',
-			(!prefixcmp(ref->name, "refs/tags/") ? "[new tag]" :
-			  "[new branch]"),
-			ref, ref->peer_ref, NULL);
-	else {
-		char quickref[84];
-		char type;
-		const char *msg;
-
-		strcpy(quickref, status_abbrev(ref->old_sha1));
-		if (ref->nonfastforward) {
-			strcat(quickref, "...");
-			type = '+';
-			msg = "forced update";
-		} else {
-			strcat(quickref, "..");
-			type = ' ';
-			msg = NULL;
-		}
-		strcat(quickref, status_abbrev(ref->new_sha1));
-
-		print_ref_status(type, quickref, ref, ref->peer_ref, msg);
-	}
-}
-
-static int print_one_push_status(struct ref *ref, const char *dest, int count)
-{
-	if (!count)
-		fprintf(stderr, "To %s\n", dest);
-
-	switch(ref->status) {
-	case REF_STATUS_NONE:
-		print_ref_status('X', "[no match]", ref, NULL, NULL);
-		break;
-	case REF_STATUS_REJECT_NODELETE:
-		print_ref_status('!', "[rejected]", ref, NULL,
-				"remote does not support deleting refs");
-		break;
-	case REF_STATUS_UPTODATE:
-		print_ref_status('=', "[up to date]", ref,
-				ref->peer_ref, NULL);
-		break;
-	case REF_STATUS_REJECT_NONFASTFORWARD:
-		print_ref_status('!', "[rejected]", ref, ref->peer_ref,
-				"non-fast-forward");
-		break;
-	case REF_STATUS_REMOTE_REJECT:
-		print_ref_status('!', "[remote rejected]", ref,
-				ref->deletion ? NULL : ref->peer_ref,
-				ref->remote_status);
-		break;
-	case REF_STATUS_EXPECTING_REPORT:
-		print_ref_status('!', "[remote failure]", ref,
-				ref->deletion ? NULL : ref->peer_ref,
-				"remote failed to report status");
-		break;
-	case REF_STATUS_OK:
-		print_ok_ref_status(ref);
-		break;
-	}
-
-	return 1;
-}
-
-static void print_push_status(const char *dest, struct ref *refs)
-{
-	struct ref *ref;
-	int n = 0;
-
-	if (args.verbose) {
-		for (ref = refs; ref; ref = ref->next)
-			if (ref->status == REF_STATUS_UPTODATE)
-				n += print_one_push_status(ref, dest, n);
-	}
-
-	for (ref = refs; ref; ref = ref->next)
-		if (ref->status == REF_STATUS_OK)
-			n += print_one_push_status(ref, dest, n);
-
-	for (ref = refs; ref; ref = ref->next) {
-		if (ref->status != REF_STATUS_NONE &&
-		    ref->status != REF_STATUS_UPTODATE &&
-		    ref->status != REF_STATUS_OK)
-			n += print_one_push_status(ref, dest, n);
-	}
-}
-
-static int refs_pushed(struct ref *ref)
-{
-	for (; ref; ref = ref->next) {
-		switch(ref->status) {
-		case REF_STATUS_NONE:
-		case REF_STATUS_UPTODATE:
-			break;
-		default:
-			return 1;
-		}
-	}
-	return 0;
-}
-
 static void print_helper_status(struct ref *ref)
 {
 	struct strbuf buf = STRBUF_INIT;
@@ -510,6 +361,10 @@ int send_pack(struct send_pack_args *args,
 
 	if (ret < 0)
 		return ret;
+
+	if (args->porcelain)
+		return 0;
+
 	for (ref = remote_refs; ref; ref = ref->next) {
 		switch (ref->status) {
 		case REF_STATUS_NONE:
@@ -523,37 +378,6 @@ int send_pack(struct send_pack_args *args,
 	return 0;
 }
 
-static void verify_remote_names(int nr_heads, const char **heads)
-{
-	int i;
-
-	for (i = 0; i < nr_heads; i++) {
-		const char *local = heads[i];
-		const char *remote = strrchr(heads[i], ':');
-
-		if (*local == '+')
-			local++;
-
-		/* A matching refspec is okay.  */
-		if (remote == local && remote[1] == '\0')
-			continue;
-
-		remote = remote ? (remote + 1) : local;
-		switch (check_ref_format(remote)) {
-		case 0: /* ok */
-		case CHECK_REF_FORMAT_ONELEVEL:
-			/* ok but a single level -- that is fine for
-			 * a match pattern.
-			 */
-		case CHECK_REF_FORMAT_WILDCARD:
-			/* ok but ends with a pattern-match character */
-			continue;
-		}
-		die("remote part of refspec is not a valid name in %s",
-		    heads[i]);
-	}
-}
-
 int cmd_send_pack(int argc, const char **argv, const char *prefix)
 {
 	int i, nr_refspecs = 0;
@@ -570,6 +394,7 @@ int cmd_send_pack(int argc, const char **argv, const char *prefix)
 	int send_all = 0;
 	const char *receivepack = "git-receive-pack";
 	int flags;
+	int nonfastforward = 0;
 
 	argv++;
 	for (i = 1; i < argc; i++, argv++) {
@@ -662,7 +487,7 @@ int cmd_send_pack(int argc, const char **argv, const char *prefix)
 	get_remote_heads(fd[0], &remote_refs, 0, NULL, REF_NORMAL,
 			 &extra_have);
 
-	verify_remote_names(nr_refspecs, refspecs);
+	transport_verify_remote_names(nr_refspecs, refspecs);
 
 	local_refs = get_local_heads();
 
@@ -691,15 +516,15 @@ int cmd_send_pack(int argc, const char **argv, const char *prefix)
 	ret |= finish_connect(conn);
 
 	if (!helper_status)
-		print_push_status(dest, remote_refs);
+		transport_print_push_status(dest, remote_refs, args.verbose, 0, &nonfastforward);
 
 	if (!args.dry_run && remote) {
 		struct ref *ref;
 		for (ref = remote_refs; ref; ref = ref->next)
-			update_tracking_ref(remote, ref);
+			transport_update_tracking_ref(remote, ref, args.verbose);
 	}
 
-	if (!ret && !refs_pushed(remote_refs))
+	if (!ret && !transport_refs_pushed(remote_refs))
 		fprintf(stderr, "Everything up-to-date\n");
 
 	return ret;
diff --git a/builtin-shortlog.c b/builtin/shortlog.c
index b3b055f68..06320f528 100644
--- a/builtin-shortlog.c
+++ b/builtin/shortlog.c
@@ -295,6 +295,8 @@ parse_done:
 	if (!nongit && !rev.pending.nr && isatty(0))
 		add_head_to_pending(&rev);
 	if (rev.pending.nr == 0) {
+		if (isatty(0))
+			fprintf(stderr, "(reading log message from standard input)\n");
 		read_from_stdin(&log);
 	}
 	else
@@ -304,9 +306,19 @@ parse_done:
 	return 0;
 }
 
+static void add_wrapped_shortlog_msg(struct strbuf *sb, const char *s,
+				     const struct shortlog *log)
+{
+	int col = strbuf_add_wrapped_text(sb, s, log->in1, log->in2, log->wrap);
+	if (col != log->wrap)
+		strbuf_addch(sb, '\n');
+}
+
 void shortlog_output(struct shortlog *log)
 {
 	int i, j;
+	struct strbuf sb = STRBUF_INIT;
+
 	if (log->sort_by_number)
 		qsort(log->list.items, log->list.nr, sizeof(struct string_list_item),
 			compare_by_number);
@@ -321,9 +333,9 @@ void shortlog_output(struct shortlog *log)
 				const char *msg = onelines->items[j].string;
 
 				if (log->wrap_lines) {
-					int col = print_wrapped_text(msg, log->in1, log->in2, log->wrap);
-					if (col != log->wrap)
-						putchar('\n');
+					strbuf_reset(&sb);
+					add_wrapped_shortlog_msg(&sb, msg, log);
+					fwrite(sb.buf, sb.len, 1, stdout);
 				}
 				else
 					printf("      %s\n", msg);
@@ -337,6 +349,7 @@ void shortlog_output(struct shortlog *log)
 		log->list.items[i].util = NULL;
 	}
 
+	strbuf_release(&sb);
 	log->list.strdup_strings = 1;
 	string_list_clear(&log->list, 1);
 	clear_mailmap(&log->mailmap);
diff --git a/builtin-show-branch.c b/builtin/show-branch.c
index 35a709e63..e20fcf3e9 100644
--- a/builtin-show-branch.c
+++ b/builtin/show-branch.c
@@ -6,7 +6,7 @@
 #include "parse-options.h"
 
 static const char* show_branch_usage[] = {
-    "git show-branch [-a|--all] [-r|--remotes] [--topo-order | --date-order] [--current] [--color | --no-color] [--sparse] [--more=<n> | --list | --independent | --merge-base] [--no-name | --sha1-name] [--topics] [<rev> | <glob>]...",
+    "git show-branch [-a|--all] [-r|--remotes] [--topo-order | --date-order] [--current] [--color[=<when>] | --no-color] [--sparse] [--more=<n> | --list | --independent | --merge-base] [--no-name | --sha1-name] [--topics] [<rev> | <glob>]...",
     "git show-branch (-g|--reflog)[=<n>[,<base>]] [--list] [<ref>]",
     NULL
 };
@@ -661,7 +661,7 @@ int cmd_show_branch(int ac, const char **av, const char *prefix)
 			    "show remote-tracking and local branches"),
 		OPT_BOOLEAN('r', "remotes", &all_remotes,
 			    "show remote-tracking branches"),
-		OPT_BOOLEAN(0, "color", &showbranch_use_color,
+		OPT__COLOR(&showbranch_use_color,
 			    "color '*!+-' corresponding to the branch"),
 		{ OPTION_INTEGER, 0, "more", &extra, "n",
 			    "show <n> more commits after the common ancestor",
diff --git a/builtin-show-ref.c b/builtin/show-ref.c
index 17ada88df..17ada88df 100644
--- a/builtin-show-ref.c
+++ b/builtin/show-ref.c
diff --git a/builtin-stripspace.c b/builtin/stripspace.c
index 4d3b93fed..4d3b93fed 100644
--- a/builtin-stripspace.c
+++ b/builtin/stripspace.c
diff --git a/builtin-symbolic-ref.c b/builtin/symbolic-ref.c
index ca855a5eb..ca855a5eb 100644
--- a/builtin-symbolic-ref.c
+++ b/builtin/symbolic-ref.c
diff --git a/builtin-tag.c b/builtin/tag.c
index 4ef1c4f50..4ef1c4f50 100644
--- a/builtin-tag.c
+++ b/builtin/tag.c
diff --git a/builtin-tar-tree.c b/builtin/tar-tree.c
index 3f1e7012d..3f1e7012d 100644
--- a/builtin-tar-tree.c
+++ b/builtin/tar-tree.c
diff --git a/builtin-unpack-file.c b/builtin/unpack-file.c
index 608590ada..608590ada 100644
--- a/builtin-unpack-file.c
+++ b/builtin/unpack-file.c
diff --git a/builtin-unpack-objects.c b/builtin/unpack-objects.c
index 685566e0b..685566e0b 100644
--- a/builtin-unpack-objects.c
+++ b/builtin/unpack-objects.c
diff --git a/builtin-update-index.c b/builtin/update-index.c
index 3ab214d24..3ab214d24 100644
--- a/builtin-update-index.c
+++ b/builtin/update-index.c
diff --git a/builtin-update-ref.c b/builtin/update-ref.c
index 76ba1d588..76ba1d588 100644
--- a/builtin-update-ref.c
+++ b/builtin/update-ref.c
diff --git a/builtin-update-server-info.c b/builtin/update-server-info.c
index 2b3fddcc6..2b3fddcc6 100644
--- a/builtin-update-server-info.c
+++ b/builtin/update-server-info.c
diff --git a/builtin-upload-archive.c b/builtin/upload-archive.c
index 73f788ef2..73f788ef2 100644
--- a/builtin-upload-archive.c
+++ b/builtin/upload-archive.c
diff --git a/builtin-var.c b/builtin/var.c
index 228051819..70fdb4dec 100644
--- a/builtin-var.c
+++ b/builtin/var.c
@@ -6,7 +6,7 @@
 #include "cache.h"
 #include "exec_cmd.h"
 
-static const char var_usage[] = "git var [-l | <variable>]";
+static const char var_usage[] = "git var (-l | <variable>)";
 
 static const char *editor(int flag)
 {
@@ -20,7 +20,7 @@ static const char *editor(int flag)
 
 static const char *pager(int flag)
 {
-	const char *pgm = git_pager();
+	const char *pgm = git_pager(1);
 
 	if (!pgm)
 		pgm = "cat";
diff --git a/builtin-verify-pack.c b/builtin/verify-pack.c
index b6079ae6c..b6079ae6c 100644
--- a/builtin-verify-pack.c
+++ b/builtin/verify-pack.c
diff --git a/builtin-verify-tag.c b/builtin/verify-tag.c
index 9f482c29f..9f482c29f 100644
--- a/builtin-verify-tag.c
+++ b/builtin/verify-tag.c
diff --git a/builtin-write-tree.c b/builtin/write-tree.c
index b223af416..b223af416 100644
--- a/builtin-write-tree.c
+++ b/builtin/write-tree.c
diff --git a/cache.h b/cache.h
index d478eff1f..f62db0bd7 100644
--- a/cache.h
+++ b/cache.h
@@ -388,6 +388,15 @@ static inline enum object_type object_type(unsigned int mode)
 #define GIT_NOTES_REF_ENVIRONMENT "GIT_NOTES_REF"
 #define GIT_NOTES_DEFAULT_REF "refs/notes/commits"
 
+/*
+ * Repository-local GIT_* environment variables
+ * The array is NULL-terminated to simplify its usage in contexts such
+ * environment creation or simple walk of the list.
+ * The number of non-NULL entries is available as a macro.
+ */
+#define LOCAL_REPO_ENV_SIZE 8
+extern const char *const local_repo_env[LOCAL_REPO_ENV_SIZE + 1];
+
 extern int is_bare_repository_cfg;
 extern int is_bare_repository(void);
 extern int is_inside_git_dir(void);
@@ -641,6 +650,10 @@ int git_mkstemp(char *path, size_t n, const char *template);
 
 int git_mkstemps(char *path, size_t n, const char *template, int suffix_len);
 
+/* set default permissions by passing mode arguments to open(2) */
+int git_mkstemps_mode(char *pattern, int suffix_len, int mode);
+int git_mkstemp_mode(char *pattern, int mode);
+
 /*
  * NOTE NOTE NOTE!!
  *
@@ -675,6 +688,7 @@ int normalize_path_copy(char *dst, const char *src);
 int longest_ancestor_length(const char *path, const char *prefix_list);
 char *strip_path_suffix(const char *path, const char *suffix);
 int daemon_avoid_alias(const char *path);
+int offset_1st_component(const char *path);
 
 /* Read and unpack a sha1 file into memory, write memory to a sha1 file */
 extern int sha1_object_info(const unsigned char *, unsigned long *);
@@ -775,7 +789,7 @@ extern const char *git_committer_info(int);
 extern const char *fmt_ident(const char *name, const char *email, const char *date_str, int);
 extern const char *fmt_name(const char *name, const char *email);
 extern const char *git_editor(void);
-extern const char *git_pager(void);
+extern const char *git_pager(int stdout_is_tty);
 
 struct checkout {
 	const char *base_dir;
@@ -877,6 +891,7 @@ struct ref {
 extern struct ref *find_ref_by_name(const struct ref *list, const char *name);
 
 #define CONNECT_VERBOSE       (1u << 0)
+extern char *git_getpass(const char *prompt);
 extern struct child_process *git_connect(int fd[2], const char *url, const char *prog, int flags);
 extern int finish_connect(struct child_process *conn);
 extern int path_match(const char *path, int nr, char **match);
diff --git a/color.c b/color.c
index 62977f480..bcf4e2c19 100644
--- a/color.c
+++ b/color.c
@@ -47,7 +47,7 @@ void color_parse_mem(const char *value, int value_len, const char *var,
 {
 	const char *ptr = value;
 	int len = value_len;
-	int attr = -1;
+	unsigned int attr = 0;
 	int fg = -2;
 	int bg = -2;
 
@@ -56,7 +56,7 @@ void color_parse_mem(const char *value, int value_len, const char *var,
 		return;
 	}
 
-	/* [fg [bg]] [attr] */
+	/* [fg [bg]] [attr]... */
 	while (len > 0) {
 		const char *word = ptr;
 		int val, wordlen = 0;
@@ -85,19 +85,27 @@ void color_parse_mem(const char *value, int value_len, const char *var,
 			goto bad;
 		}
 		val = parse_attr(word, wordlen);
-		if (val < 0 || attr != -1)
+		if (0 <= val)
+			attr |= (1 << val);
+		else
 			goto bad;
-		attr = val;
 	}
 
-	if (attr >= 0 || fg >= 0 || bg >= 0) {
+	if (attr || fg >= 0 || bg >= 0) {
 		int sep = 0;
+		int i;
 
 		*dst++ = '\033';
 		*dst++ = '[';
-		if (attr >= 0) {
-			*dst++ = '0' + attr;
-			sep++;
+
+		for (i = 0; attr; i++) {
+			unsigned bit = (1 << i);
+			if (!(attr & bit))
+				continue;
+			attr &= ~bit;
+			if (sep++)
+				*dst++ = ';';
+			*dst++ = '0' + i;
 		}
 		if (fg >= 0) {
 			if (sep++)
@@ -138,6 +146,9 @@ int git_config_colorbool(const char *var, const char *value, int stdout_is_tty)
 			goto auto_color;
 	}
 
+	if (!var)
+		return -1;
+
 	/* Missing or explicit false to turn off colorization */
 	if (!git_config_bool(var, value))
 		return 0;
diff --git a/color.h b/color.h
index bfeea1f20..5c264b0ce 100644
--- a/color.h
+++ b/color.h
@@ -1,8 +1,20 @@
 #ifndef COLOR_H
 #define COLOR_H
 
-/* "\033[1;38;5;2xx;48;5;2xxm\0" is 23 bytes */
-#define COLOR_MAXLEN 24
+/*  2 + (2 * num_attrs) + 8 + 1 + 8 + 'm' + NUL */
+/* "\033[1;2;4;5;7;38;5;2xx;48;5;2xxm\0" */
+/*
+ * The maximum length of ANSI color sequence we would generate:
+ * - leading ESC '['            2
+ * - attr + ';'                 2 * 8 (e.g. "1;")
+ * - fg color + ';'             9 (e.g. "38;5;2xx;")
+ * - fg color + ';'             9 (e.g. "48;5;2xx;")
+ * - terminating 'm' NUL        2
+ *
+ * The above overcounts attr (we only use 5 not 8) and one semicolon
+ * but it is close enough.
+ */
+#define COLOR_MAXLEN 40
 
 /*
  * IMPORTANT: Due to the way these color codes are emulated on Windows,
diff --git a/compat/mkdtemp.c b/compat/mkdtemp.c
index 34d4b4981..113611959 100644
--- a/compat/mkdtemp.c
+++ b/compat/mkdtemp.c
@@ -2,7 +2,7 @@
 
 char *gitmkdtemp(char *template)
 {
-	if (!mktemp(template) || mkdir(template, 0700))
+	if (!*mktemp(template) || mkdir(template, 0700))
 		return NULL;
 	return template;
 }
diff --git a/compat/mkstemps.c b/compat/mkstemps.c
deleted file mode 100644
index 14179c8e6..000000000
--- a/compat/mkstemps.c
+++ /dev/null
@@ -1,70 +0,0 @@
-#include "../git-compat-util.h"
-
-/* Adapted from libiberty's mkstemp.c. */
-
-#undef TMP_MAX
-#define TMP_MAX 16384
-
-int gitmkstemps(char *pattern, int suffix_len)
-{
-	static const char letters[] =
-		"abcdefghijklmnopqrstuvwxyz"
-		"ABCDEFGHIJKLMNOPQRSTUVWXYZ"
-		"0123456789";
-	static const int num_letters = 62;
-	uint64_t value;
-	struct timeval tv;
-	char *template;
-	size_t len;
-	int fd, count;
-
-	len = strlen(pattern);
-
-	if (len < 6 + suffix_len) {
-		errno = EINVAL;
-		return -1;
-	}
-
-	if (strncmp(&pattern[len - 6 - suffix_len], "XXXXXX", 6)) {
-		errno = EINVAL;
-		return -1;
-	}
-
-	/*
-	 * Replace pattern's XXXXXX characters with randomness.
-	 * Try TMP_MAX different filenames.
-	 */
-	gettimeofday(&tv, NULL);
-	value = ((size_t)(tv.tv_usec << 16)) ^ tv.tv_sec ^ getpid();
-	template = &pattern[len - 6 - suffix_len];
-	for (count = 0; count < TMP_MAX; ++count) {
-		uint64_t v = value;
-		/* Fill in the random bits. */
-		template[0] = letters[v % num_letters]; v /= num_letters;
-		template[1] = letters[v % num_letters]; v /= num_letters;
-		template[2] = letters[v % num_letters]; v /= num_letters;
-		template[3] = letters[v % num_letters]; v /= num_letters;
-		template[4] = letters[v % num_letters]; v /= num_letters;
-		template[5] = letters[v % num_letters]; v /= num_letters;
-
-		fd = open(pattern, O_CREAT | O_EXCL | O_RDWR, 0600);
-		if (fd > 0)
-			return fd;
-		/*
-		 * Fatal error (EPERM, ENOSPC etc).
-		 * It doesn't make sense to loop.
-		 */
-		if (errno != EEXIST)
-			break;
-		/*
-		 * This is a random value.  It is only necessary that
-		 * the next TMP_MAX values generated by adding 7777 to
-		 * VALUE are different with (module 2^32).
-		 */
-		value += 7777;
-	}
-	/* We return the null string if we can't find a unique file name.  */
-	pattern[0] = '\0';
-	errno = EINVAL;
-	return -1;
-}
diff --git a/connect.c b/connect.c
index a37cf6af0..9ae991ac4 100644
--- a/connect.c
+++ b/connect.c
@@ -152,6 +152,28 @@ static enum protocol get_protocol(const char *name)
 #define STR_(s)	# s
 #define STR(s)	STR_(s)
 
+static void get_host_and_port(char **host, const char **port)
+{
+	char *colon, *end;
+
+	if (*host[0] == '[') {
+		end = strchr(*host + 1, ']');
+		if (end) {
+			*end = 0;
+			end++;
+			(*host)++;
+		} else
+			end = *host;
+	} else
+		end = *host;
+	colon = strchr(end, ':');
+
+	if (colon) {
+		*colon = 0;
+		*port = colon + 1;
+	}
+}
+
 #ifndef NO_IPV6
 
 static const char *ai_name(const struct addrinfo *ai)
@@ -170,30 +192,14 @@ static const char *ai_name(const struct addrinfo *ai)
 static int git_tcp_connect_sock(char *host, int flags)
 {
 	int sockfd = -1, saved_errno = 0;
-	char *colon, *end;
 	const char *port = STR(DEFAULT_GIT_PORT);
 	struct addrinfo hints, *ai0, *ai;
 	int gai;
 	int cnt = 0;
 
-	if (host[0] == '[') {
-		end = strchr(host + 1, ']');
-		if (end) {
-			*end = 0;
-			end++;
-			host++;
-		} else
-			end = host;
-	} else
-		end = host;
-	colon = strchr(end, ':');
-
-	if (colon) {
-		*colon = 0;
-		port = colon + 1;
-		if (!*port)
-			port = "<none>";
-	}
+	get_host_and_port(&host, &port);
+	if (!*port)
+		port = "<none>";
 
 	memset(&hints, 0, sizeof(hints));
 	hints.ai_socktype = SOCK_STREAM;
@@ -251,30 +257,15 @@ static int git_tcp_connect_sock(char *host, int flags)
 static int git_tcp_connect_sock(char *host, int flags)
 {
 	int sockfd = -1, saved_errno = 0;
-	char *colon, *end;
-	char *port = STR(DEFAULT_GIT_PORT), *ep;
+	const char *port = STR(DEFAULT_GIT_PORT);
+	char *ep;
 	struct hostent *he;
 	struct sockaddr_in sa;
 	char **ap;
 	unsigned int nport;
 	int cnt;
 
-	if (host[0] == '[') {
-		end = strchr(host + 1, ']');
-		if (end) {
-			*end = 0;
-			end++;
-			host++;
-		} else
-			end = host;
-	} else
-		end = host;
-	colon = strchr(end, ':');
-
-	if (colon) {
-		*colon = 0;
-		port = colon + 1;
-	}
+	get_host_and_port(&host, &port);
 
 	if (flags & CONNECT_VERBOSE)
 		fprintf(stderr, "Looking up %s ... ", host);
@@ -406,26 +397,10 @@ static int git_use_proxy(const char *host)
 static void git_proxy_connect(int fd[2], char *host)
 {
 	const char *port = STR(DEFAULT_GIT_PORT);
-	char *colon, *end;
 	const char *argv[4];
 	struct child_process proxy;
 
-	if (host[0] == '[') {
-		end = strchr(host + 1, ']');
-		if (end) {
-			*end = 0;
-			end++;
-			host++;
-		} else
-			end = host;
-	} else
-		end = host;
-	colon = strchr(end, ':');
-
-	if (colon) {
-		*colon = 0;
-		port = colon + 1;
-	}
+	get_host_and_port(&host, &port);
 
 	argv[0] = git_proxy_command;
 	argv[1] = host;
@@ -607,18 +582,8 @@ struct child_process *git_connect(int fd[2], const char *url_orig,
 		*arg++ = host;
 	}
 	else {
-		/* remove these from the environment */
-		const char *env[] = {
-			ALTERNATE_DB_ENVIRONMENT,
-			DB_ENVIRONMENT,
-			GIT_DIR_ENVIRONMENT,
-			GIT_WORK_TREE_ENVIRONMENT,
-			GRAFT_ENVIRONMENT,
-			INDEX_ENVIRONMENT,
-			NO_REPLACE_OBJECTS_ENVIRONMENT,
-			NULL
-		};
-		conn->env = env;
+		/* remove repo-local variables from the environment */
+		conn->env = local_repo_env;
 		conn->use_shell = 1;
 	}
 	*arg++ = cmd.buf;
@@ -647,3 +612,40 @@ int finish_connect(struct child_process *conn)
 	free(conn);
 	return code;
 }
+
+char *git_getpass(const char *prompt)
+{
+	char *askpass;
+	struct child_process pass;
+	const char *args[3];
+	static struct strbuf buffer = STRBUF_INIT;
+
+	askpass = getenv("GIT_ASKPASS");
+
+	if (!askpass || !(*askpass))
+		return getpass(prompt);
+
+	args[0] = askpass;
+	args[1]	= prompt;
+	args[2] = NULL;
+
+	memset(&pass, 0, sizeof(pass));
+	pass.argv = args;
+	pass.out = -1;
+
+	if (start_command(&pass))
+		exit(1);
+
+	strbuf_reset(&buffer);
+	if (strbuf_read(&buffer, pass.out, 20) < 0)
+		die("failed to read password from %s\n", askpass);
+
+	close(pass.out);
+
+	if (finish_command(&pass))
+		exit(1);
+
+	strbuf_setlen(&buffer, strcspn(buffer.buf, "\r\n"));
+
+	return buffer.buf;
+}
diff --git a/contrib/completion/git-completion.bash b/contrib/completion/git-completion.bash
index fe93747c9..733ac39a3 100755
--- a/contrib/completion/git-completion.bash
+++ b/contrib/completion/git-completion.bash
@@ -250,7 +250,9 @@ __git_refs ()
 			refs="${cur%/*}"
 			;;
 		*)
-			if [ -e "$dir/HEAD" ]; then echo HEAD; fi
+			for i in HEAD FETCH_HEAD ORIG_HEAD MERGE_HEAD; do
+				if [ -e "$dir/$i" ]; then echo $i; fi
+			done
 			format="refname:short"
 			refs="refs/tags refs/heads refs/remotes"
 			;;
diff --git a/git-notes.sh b/contrib/examples/git-notes.sh
index e642e47d9..e642e47d9 100755
--- a/git-notes.sh
+++ b/contrib/examples/git-notes.sh
diff --git a/contrib/fast-import/git-p4 b/contrib/fast-import/git-p4
index cd96c6f81..c1ea643ac 100755
--- a/contrib/fast-import/git-p4
+++ b/contrib/fast-import/git-p4
@@ -802,7 +802,7 @@ class P4Submit(Command):
         self.oldWorkingDirectory = os.getcwd()
 
         chdir(self.clientPath)
-        print "Syncronizing p4 checkout..."
+        print "Synchronizing p4 checkout..."
         p4_system("sync ...")
 
         self.check()
diff --git a/daemon.c b/daemon.c
index 3769b6f57..7d9e1c03e 100644
--- a/daemon.c
+++ b/daemon.c
@@ -420,7 +420,7 @@ static void parse_host_and_port(char *hostport, char **host,
 		*host = hostport;
 		*port = strrchr(hostport, ':');
 		if (*port) {
-			*port = '\0';
+			**port = '\0';
 			++*port;
 		}
 	}
diff --git a/diff.c b/diff.c
index 989dbc54c..dfdfa1a81 100644
--- a/diff.c
+++ b/diff.c
@@ -2826,6 +2826,15 @@ int diff_opt_parse(struct diff_options *options, const char **av, int ac)
 		DIFF_OPT_SET(options, FOLLOW_RENAMES);
 	else if (!strcmp(arg, "--color"))
 		DIFF_OPT_SET(options, COLOR_DIFF);
+	else if (!prefixcmp(arg, "--color=")) {
+		int value = git_config_colorbool(NULL, arg+8, -1);
+		if (value == 0)
+			DIFF_OPT_CLR(options, COLOR_DIFF);
+		else if (value > 0)
+			DIFF_OPT_SET(options, COLOR_DIFF);
+		else
+			return error("option `color' expects \"always\", \"auto\", or \"never\"");
+	}
 	else if (!strcmp(arg, "--no-color"))
 		DIFF_OPT_CLR(options, COLOR_DIFF);
 	else if (!strcmp(arg, "--color-words")) {
@@ -3522,6 +3531,29 @@ void diff_flush(struct diff_options *options)
 		separator++;
 	}
 
+	if (output_format & DIFF_FORMAT_NO_OUTPUT &&
+	    DIFF_OPT_TST(options, EXIT_WITH_STATUS) &&
+	    DIFF_OPT_TST(options, DIFF_FROM_CONTENTS)) {
+		/*
+		 * run diff_flush_patch for the exit status. setting
+		 * options->file to /dev/null should be safe, becaue we
+		 * aren't supposed to produce any output anyway.
+		 */
+		if (options->close_file)
+			fclose(options->file);
+		options->file = fopen("/dev/null", "w");
+		if (!options->file)
+			die_errno("Could not open /dev/null");
+		options->close_file = 1;
+		for (i = 0; i < q->nr; i++) {
+			struct diff_filepair *p = q->queue[i];
+			if (check_pair_status(p))
+				diff_flush_patch(p, options);
+			if (options->found_changes)
+				break;
+		}
+	}
+
 	if (output_format & DIFF_FORMAT_PATCH) {
 		if (separator) {
 			putc(options->line_termination, options->file);
diff --git a/environment.c b/environment.c
index 739ec2704..876c5e534 100644
--- a/environment.c
+++ b/environment.c
@@ -63,6 +63,23 @@ static char *work_tree;
 static const char *git_dir;
 static char *git_object_dir, *git_index_file, *git_refs_dir, *git_graft_file;
 
+/*
+ * Repository-local GIT_* environment variables
+ * Remember to update local_repo_env_size in cache.h when
+ * the size of the list changes
+ */
+const char * const local_repo_env[LOCAL_REPO_ENV_SIZE + 1] = {
+	ALTERNATE_DB_ENVIRONMENT,
+	CONFIG_ENVIRONMENT,
+	DB_ENVIRONMENT,
+	GIT_DIR_ENVIRONMENT,
+	GIT_WORK_TREE_ENVIRONMENT,
+	GRAFT_ENVIRONMENT,
+	INDEX_ENVIRONMENT,
+	NO_REPLACE_OBJECTS_ENVIRONMENT,
+	NULL
+};
+
 static void setup_git_env(void)
 {
 	git_dir = getenv(GIT_DIR_ENVIRONMENT);
diff --git a/exec_cmd.c b/exec_cmd.c
index 408e4e55e..b2c07c70c 100644
--- a/exec_cmd.c
+++ b/exec_cmd.c
@@ -28,7 +28,7 @@ const char *system_path(const char *path)
 	    !(prefix = strip_path_suffix(argv0_path, BINDIR)) &&
 	    !(prefix = strip_path_suffix(argv0_path, "git"))) {
 		prefix = PREFIX;
-		fprintf(stderr, "RUNTIME_PREFIX requested, "
+		trace_printf("RUNTIME_PREFIX requested, "
 				"but prefix computation failed.  "
 				"Using static fallback '%s'.\n", prefix);
 	}
diff --git a/fast-import.c b/fast-import.c
index 74f08bd55..309f2c58a 100644
--- a/fast-import.c
+++ b/fast-import.c
@@ -980,29 +980,6 @@ static void cycle_packfile(void)
 	start_packfile();
 }
 
-static size_t encode_header(
-	enum object_type type,
-	uintmax_t size,
-	unsigned char *hdr)
-{
-	int n = 1;
-	unsigned char c;
-
-	if (type < OBJ_COMMIT || type > OBJ_REF_DELTA)
-		die("bad type %d", type);
-
-	c = (type << 4) | (size & 15);
-	size >>= 4;
-	while (size) {
-		*hdr++ = c | 0x80;
-		c = size & 0x7f;
-		size >>= 7;
-		n++;
-	}
-	*hdr = c;
-	return n;
-}
-
 static int store_object(
 	enum object_type type,
 	struct strbuf *dat,
@@ -1103,7 +1080,7 @@ static int store_object(
 		delta_count_by_type[type]++;
 		e->depth = last->depth + 1;
 
-		hdrlen = encode_header(OBJ_OFS_DELTA, deltalen, hdr);
+		hdrlen = encode_in_pack_object_header(OBJ_OFS_DELTA, deltalen, hdr);
 		sha1write(pack_file, hdr, hdrlen);
 		pack_size += hdrlen;
 
@@ -1114,7 +1091,7 @@ static int store_object(
 		pack_size += sizeof(hdr) - pos;
 	} else {
 		e->depth = 0;
-		hdrlen = encode_header(type, dat->len, hdr);
+		hdrlen = encode_in_pack_object_header(type, dat->len, hdr);
 		sha1write(pack_file, hdr, hdrlen);
 		pack_size += hdrlen;
 	}
@@ -1188,7 +1165,7 @@ static void stream_blob(uintmax_t len, unsigned char *sha1out, uintmax_t mark)
 	memset(&s, 0, sizeof(s));
 	deflateInit(&s, pack_compression_level);
 
-	hdrlen = encode_header(OBJ_BLOB, len, out_buf);
+	hdrlen = encode_in_pack_object_header(OBJ_BLOB, len, out_buf);
 	if (out_sz <= hdrlen)
 		die("impossibly large object header");
 
diff --git a/git-add--interactive.perl b/git-add--interactive.perl
index cd43c3491..21f1330a5 100755
--- a/git-add--interactive.perl
+++ b/git-add--interactive.perl
@@ -957,6 +957,28 @@ sub coalesce_overlapping_hunks {
 	return @out;
 }
 
+sub reassemble_patch {
+	my $head = shift;
+	my @patch;
+
+	# Include everything in the header except the beginning of the diff.
+	push @patch, (grep { !/^[-+]{3}/ } @$head);
+
+	# Then include any headers from the hunk lines, which must
+	# come before any actual hunk.
+	while (@_ && $_[0] !~ /^@/) {
+		push @patch, shift;
+	}
+
+	# Then begin the diff.
+	push @patch, grep { /^[-+]{3}/ } @$head;
+
+	# And then the actual hunks.
+	push @patch, @_;
+
+	return @patch;
+}
+
 sub color_diff {
 	return map {
 		colored((/^@/  ? $fraginfo_color :
@@ -1453,7 +1475,7 @@ sub patch_update_file {
 
 	if (@result) {
 		my $fh;
-		my @patch = (@{$head->{TEXT}}, @result);
+		my @patch = reassemble_patch($head->{TEXT}, @result);
 		my $apply_routine = $patch_mode_flavour{APPLY};
 		&$apply_routine(@patch);
 		refresh();
diff --git a/git-am.sh b/git-am.sh
index ebfbee59d..50a292a7d 100755
--- a/git-am.sh
+++ b/git-am.sh
@@ -15,6 +15,8 @@ q,quiet         be quiet
 s,signoff       add a Signed-off-by line to the commit message
 u,utf8          recode into utf8 (default)
 k,keep          pass -k flag to git-mailinfo
+keep-cr         pass --keep-cr flag to git-mailsplit for mbox format
+no-keep-cr      do not pass --keep-cr flag to git-mailsplit independent of am.keepcr
 c,scissors      strip everything before a scissors line
 whitespace=     pass it through git-apply
 ignore-space-change pass it through git-apply
@@ -217,12 +219,12 @@ check_patch_format () {
 split_patches () {
 	case "$patch_format" in
 	mbox)
-		case "$rebasing" in
-		'')
-			keep_cr= ;;
-		?*)
-			keep_cr=--keep-cr ;;
-		esac
+		if test -n "$rebasing" || test t = "$keepcr"
+		then
+		    keep_cr=--keep-cr
+		else
+		    keep_cr=
+		fi
 		git mailsplit -d"$prec" -o"$dotest" -b $keep_cr -- "$@" > "$dotest/last" ||
 		clean_abort
 		;;
@@ -291,13 +293,18 @@ split_patches () {
 
 prec=4
 dotest="$GIT_DIR/rebase-apply"
-sign= utf8=t keep= skip= interactive= resolved= rebasing= abort=
+sign= utf8=t keep= keepcr= skip= interactive= resolved= rebasing= abort=
 resolvemsg= resume= scissors= no_inbody_headers=
 git_apply_opt=
 committer_date_is_author_date=
 ignore_date=
 allow_rerere_autoupdate=
 
+if test "$(git config --bool --get am.keepcr)" = true
+then
+    keepcr=t
+fi
+
 while test $# != 0
 do
 	case "$1" in
@@ -348,6 +355,10 @@ do
 		allow_rerere_autoupdate="$1" ;;
 	-q|--quiet)
 		GIT_QUIET=t ;;
+	--keep-cr)
+		keepcr=t ;;
+	--no-keep-cr)
+		keepcr=f ;;
 	--)
 		shift; break ;;
 	*)
@@ -453,6 +464,7 @@ else
 	echo "$sign" >"$dotest/sign"
 	echo "$utf8" >"$dotest/utf8"
 	echo "$keep" >"$dotest/keep"
+	echo "$keepcr" >"$dotest/keepcr"
 	echo "$scissors" >"$dotest/scissors"
 	echo "$no_inbody_headers" >"$dotest/no_inbody_headers"
 	echo "$GIT_QUIET" >"$dotest/quiet"
@@ -496,6 +508,12 @@ if test "$(cat "$dotest/keep")" = t
 then
 	keep=-k
 fi
+case "$(cat "$dotest/keepcr")" in
+t)
+	keepcr=--keep-cr ;;
+f)
+	keepcr=--no-keep-cr ;;
+esac
 case "$(cat "$dotest/scissors")" in
 t)
 	scissors=--scissors ;;
@@ -663,10 +681,7 @@ do
 		[eE]*) git_editor "$dotest/final-commit"
 		       action=again ;;
 		[vV]*) action=again
-		       : ${GIT_PAGER=$(git var GIT_PAGER)}
-		       : ${LESS=-FRSX}
-		       export LESS
-		       $GIT_PAGER "$dotest/patch" ;;
+		       git_pager "$dotest/patch" ;;
 		*)     action=again ;;
 		esac
 	    done
diff --git a/git-cvsimport.perl b/git-cvsimport.perl
index 4853bf7a0..9e03eee45 100755
--- a/git-cvsimport.perl
+++ b/git-cvsimport.perl
@@ -29,7 +29,7 @@ use IPC::Open2;
 $SIG{'PIPE'}="IGNORE";
 $ENV{'TZ'}="UTC";
 
-our ($opt_h,$opt_o,$opt_v,$opt_k,$opt_u,$opt_d,$opt_p,$opt_C,$opt_z,$opt_i,$opt_P, $opt_s,$opt_m,@opt_M,$opt_A,$opt_S,$opt_L, $opt_a, $opt_r);
+our ($opt_h,$opt_o,$opt_v,$opt_k,$opt_u,$opt_d,$opt_p,$opt_C,$opt_z,$opt_i,$opt_P, $opt_s,$opt_m,@opt_M,$opt_A,$opt_S,$opt_L, $opt_a, $opt_r, $opt_R);
 my (%conv_author_name, %conv_author_email);
 
 sub usage(;$) {
@@ -40,7 +40,7 @@ Usage: git cvsimport     # fetch/update GIT from CVS
        [-o branch-for-HEAD] [-h] [-v] [-d CVSROOT] [-A author-conv-file]
        [-p opts-for-cvsps] [-P file] [-C GIT_repository] [-z fuzz] [-i] [-k]
        [-u] [-s subst] [-a] [-m] [-M regex] [-S regex] [-L commitlimit]
-       [-r remote] [CVS_module]
+       [-r remote] [-R] [CVS_module]
 END
 	exit(1);
 }
@@ -110,7 +110,7 @@ sub read_repo_config {
 	}
 }
 
-my $opts = "haivmkuo:d:p:r:C:z:s:M:P:A:S:L:";
+my $opts = "haivmkuo:d:p:r:C:z:s:M:P:A:S:L:R";
 read_repo_config($opts);
 Getopt::Long::Configure( 'no_ignore_case', 'bundling' );
 
@@ -659,6 +659,11 @@ if ($opt_A) {
 	write_author_info("$git_dir/cvs-authors");
 }
 
+# open .git/cvs-revisions, if requested
+open my $revision_map, '>>', "$git_dir/cvs-revisions"
+    or die "Can't open $git_dir/cvs-revisions for appending: $!\n"
+	if defined $opt_R;
+
 
 #
 # run cvsps into a file unless we are getting
@@ -742,7 +747,7 @@ sub write_tree () {
 }
 
 my ($patchset,$date,$author_name,$author_email,$branch,$ancestor,$tag,$logmsg);
-my (@old,@new,@skipped,%ignorebranch);
+my (@old,@new,@skipped,%ignorebranch,@commit_revisions);
 
 # commits that cvsps cannot place anywhere...
 $ignorebranch{'#CVSPS_NO_BRANCH'} = 1;
@@ -825,6 +830,11 @@ sub commit {
 	system('git' , 'update-ref', "$remote/$branch", $cid) == 0
 		or die "Cannot write branch $branch for update: $!\n";
 
+	if ($revision_map) {
+		print $revision_map "@$_ $cid\n" for @commit_revisions;
+	}
+	@commit_revisions = ();
+
 	if ($tag) {
 	        my ($xtag) = $tag;
 		$xtag =~ s/\s+\*\*.*$//; # Remove stuff like ** INVALID ** and ** FUNKY **
@@ -959,6 +969,7 @@ while (<CVS>) {
 		    push(@skipped, $fn);
 		    next;
 		}
+		push @commit_revisions, [$fn, $rev];
 		print "Fetching $fn   v $rev\n" if $opt_v;
 		my ($tmpname, $size) = $cvs->file($fn,$rev);
 		if ($size == -1) {
@@ -981,7 +992,9 @@ while (<CVS>) {
 		unlink($tmpname);
 	} elsif ($state == 9 and /^\s+(.+?):\d+(?:\.\d+)+->(\d+(?:\.\d+)+)\(DEAD\)\s*$/) {
 		my $fn = $1;
+		my $rev = $2;
 		$fn =~ s#^/+##;
+		push @commit_revisions, [$fn, $rev];
 		push(@old,$fn);
 		print "Delete $fn\n" if $opt_v;
 	} elsif ($state == 9 and /^\s*$/) {
diff --git a/git-pull.sh b/git-pull.sh
index 38331a861..1a4729f7b 100755
--- a/git-pull.sh
+++ b/git-pull.sh
@@ -38,10 +38,10 @@ test -z "$(git ls-files -u)" || die_conflict
 test -f "$GIT_DIR/MERGE_HEAD" && die_merge
 
 strategy_args= diffstat= no_commit= squash= no_ff= ff_only=
-log_arg= verbosity=
+log_arg= verbosity= progress=
 merge_args=
 curr_branch=$(git symbolic-ref -q HEAD)
-curr_branch_short=$(echo "$curr_branch" | sed "s|refs/heads/||")
+curr_branch_short="${curr_branch#refs/heads/}"
 rebase=$(git config --bool branch.$curr_branch_short.rebase)
 while :
 do
@@ -50,6 +50,8 @@ do
 		verbosity="$verbosity -q" ;;
 	-v|--verbose)
 		verbosity="$verbosity -v" ;;
+	--progress)
+		progress=--progress ;;
 	-n|--no-stat|--no-summary)
 		diffstat=--no-stat ;;
 	--stat|--summary)
@@ -214,7 +216,7 @@ test true = "$rebase" && {
 	done
 }
 orig_head=$(git rev-parse -q --verify HEAD)
-git fetch $verbosity --update-head-ok "$@" || exit 1
+git fetch $verbosity $progress --update-head-ok "$@" || exit 1
 
 curr_head=$(git rev-parse -q --verify HEAD)
 if test -n "$orig_head" && test "$curr_head" != "$orig_head"
diff --git a/git-send-email.perl b/git-send-email.perl
index e05455f74..d612ae872 100755
--- a/git-send-email.perl
+++ b/git-send-email.perl
@@ -47,9 +47,9 @@ git send-email [options] <file | directory | rev-list options >
 
   Composing:
     --from                  <str>  * Email From:
-    --to                    <str>  * Email To:
-    --cc                    <str>  * Email Cc:
-    --bcc                   <str>  * Email Bcc:
+    --[no-]to               <str>  * Email To:
+    --[no-]cc               <str>  * Email Cc:
+    --[no-]bcc              <str>  * Email Bcc:
     --subject               <str>  * Email "Subject:"
     --in-reply-to           <str>  * Email "In-Reply-To:"
     --annotate                     * Review each patch that will be sent in an editor.
@@ -135,7 +135,7 @@ sub unique_email_list(@);
 sub cleanup_compose_files();
 
 # Variables we fill in automatically, or via prompting:
-my (@to,@cc,@initial_cc,@bcclist,@xh,
+my (@to,$no_to,@cc,$no_cc,@initial_cc,@bcclist,$no_bcc,@xh,
 	$initial_reply_to,$initial_subject,@files,
 	$author,$sender,$smtp_authpass,$annotate,$compose,$time);
 
@@ -261,8 +261,11 @@ my $rc = GetOptions("sender|from=s" => \$sender,
                     "in-reply-to=s" => \$initial_reply_to,
 		    "subject=s" => \$initial_subject,
 		    "to=s" => \@to,
+		    "no-to" => \$no_to,
 		    "cc=s" => \@initial_cc,
+		    "no-cc" => \$no_cc,
 		    "bcc=s" => \@bcclist,
+		    "no-bcc" => \$no_bcc,
 		    "chain-reply-to!" => \$chain_reply_to,
 		    "smtp-server=s" => \$smtp_server,
 		    "smtp-server-port=s" => \$smtp_server_port,
@@ -305,6 +308,9 @@ sub read_config {
 
 	foreach my $setting (keys %config_settings) {
 		my $target = $config_settings{$setting};
+		next if $setting eq "to" and defined $no_to;
+		next if $setting eq "cc" and defined $no_cc;
+		next if $setting eq "bcc" and defined $no_bcc;
 		if (ref($target) eq "ARRAY") {
 			unless (@$target) {
 				my @values = Git::config(@repo, "$prefix.$setting");
diff --git a/git-sh-setup.sh b/git-sh-setup.sh
index d56426dd3..613167086 100644
--- a/git-sh-setup.sh
+++ b/git-sh-setup.sh
@@ -107,6 +107,19 @@ git_editor() {
 	eval "$GIT_EDITOR" '"$@"'
 }
 
+git_pager() {
+	if test -t 1
+	then
+		GIT_PAGER=$(git var GIT_PAGER)
+	else
+		GIT_PAGER=cat
+	fi
+	: ${LESS=-FRSX}
+	export LESS
+
+	eval "$GIT_PAGER" '"$@"'
+}
+
 sane_grep () {
 	GREP_OPTIONS= LC_ALL=C grep "$@"
 }
@@ -128,7 +141,7 @@ cd_to_toplevel () {
 }
 
 require_work_tree () {
-	test $(git rev-parse --is-inside-work-tree) = true ||
+	test "$(git rev-parse --is-inside-work-tree 2>/dev/null)" = true ||
 	die "fatal: $0 cannot be used without a working tree."
 }
 
@@ -159,6 +172,13 @@ get_author_ident_from_commit () {
 	LANG=C LC_ALL=C sed -ne "$pick_author_script"
 }
 
+# Clear repo-local GIT_* environment variables. Useful when switching to
+# another repository (e.g. when entering a submodule). See also the env
+# list in git_connect()
+clear_local_git_env() {
+	unset $(git rev-parse --local-env-vars)
+}
+
 # Make sure we are in a valid repository of a vintage we understand,
 # if we require to be in a git repository.
 if test -z "$NONGIT_OK"
diff --git a/git-stash.sh b/git-stash.sh
index 2d6919639..aa47e541e 100755
--- a/git-stash.sh
+++ b/git-stash.sh
@@ -151,6 +151,7 @@ save_stash () {
 			;;
 		-*)
 			echo "error: unknown option for 'stash save': $1"
+			echo "       To provide a message, use git stash save -- '$1'"
 			usage
 			;;
 		*)
diff --git a/git-submodule.sh b/git-submodule.sh
index 664f21721..f21d0bfce 100755
--- a/git-submodule.sh
+++ b/git-submodule.sh
@@ -222,7 +222,7 @@ cmd_add()
 
 		module_clone "$path" "$realrepo" "$reference" || exit
 		(
-			unset GIT_DIR
+			clear_local_git_env
 			cd "$path" &&
 			# ash fails to wordsplit ${branch:+-b "$branch"...}
 			case "$branch" in
@@ -278,7 +278,7 @@ cmd_foreach()
 			name=$(module_name "$path")
 			(
 				prefix="$prefix$path/"
-				unset GIT_DIR
+				clear_local_git_env
 				cd "$path" &&
 				eval "$@" &&
 				if test -n "$recursive"
@@ -434,7 +434,7 @@ cmd_update()
 			module_clone "$path" "$url" "$reference"|| exit
 			subsha1=
 		else
-			subsha1=$(unset GIT_DIR; cd "$path" &&
+			subsha1=$(clear_local_git_env; cd "$path" &&
 				git rev-parse --verify HEAD) ||
 			die "Unable to find current revision in submodule path '$path'"
 		fi
@@ -454,7 +454,7 @@ cmd_update()
 
 			if test -z "$nofetch"
 			then
-				(unset GIT_DIR; cd "$path" &&
+				(clear_local_git_env; cd "$path" &&
 					git-fetch) ||
 				die "Unable to fetch in submodule path '$path'"
 			fi
@@ -477,14 +477,14 @@ cmd_update()
 				;;
 			esac
 
-			(unset GIT_DIR; cd "$path" && $command "$sha1") ||
+			(clear_local_git_env; cd "$path" && $command "$sha1") ||
 			die "Unable to $action '$sha1' in submodule path '$path'"
 			say "Submodule path '$path': $msg '$sha1'"
 		fi
 
 		if test -n "$recursive"
 		then
-			(unset GIT_DIR; cd "$path" && cmd_update $orig_args) ||
+			(clear_local_git_env; cd "$path" && cmd_update $orig_args) ||
 			die "Failed to recurse into submodule path '$path'"
 		fi
 	done
@@ -492,7 +492,7 @@ cmd_update()
 
 set_name_rev () {
 	revname=$( (
-		unset GIT_DIR
+		clear_local_git_env
 		cd "$1" && {
 			git describe "$2" 2>/dev/null ||
 			git describe --tags "$2" 2>/dev/null ||
@@ -553,12 +553,15 @@ cmd_summary() {
 
 	test $summary_limit = 0 && return
 
-	if rev=$(git rev-parse -q --verify "$1^0")
+	if rev=$(git rev-parse -q --verify --default HEAD ${1+"$1"})
 	then
 		head=$rev
-		shift
+		test $# = 0 || shift
+	elif test -z "$1" -o "$1" = "HEAD"
+	then
+		return
 	else
-		head=HEAD
+		head="HEAD"
 	fi
 
 	if [ -n "$files" ]
@@ -757,7 +760,7 @@ cmd_status()
 		else
 			if test -z "$cached"
 			then
-				sha1=$(unset GIT_DIR; cd "$path" && git rev-parse --verify HEAD)
+				sha1=$(clear_local_git_env; cd "$path" && git rev-parse --verify HEAD)
 				set_name_rev "$path" "$sha1"
 			fi
 			say "+$sha1 $displaypath$revname"
@@ -767,7 +770,7 @@ cmd_status()
 		then
 			(
 				prefix="$displaypath/"
-				unset GIT_DIR
+				clear_local_git_env
 				cd "$path" &&
 				cmd_status $orig_args
 			) ||
@@ -818,7 +821,7 @@ cmd_sync()
 		if test -e "$path"/.git
 		then
 		(
-			unset GIT_DIR
+			clear_local_git_env
 			cd "$path"
 			remote=$(get_default_remote)
 			say "Synchronizing submodule url for '$name'"
diff --git a/git-svn.perl b/git-svn.perl
index 49dd649bc..2c86ea2e3 100755
--- a/git-svn.perl
+++ b/git-svn.perl
@@ -351,6 +351,7 @@ information.
 }
 
 sub version {
+	::_req_svn();
 	print "git-svn version $VERSION (svn $SVN::Core::VERSION)\n";
 	exit 0;
 }
@@ -369,7 +370,6 @@ sub do_git_init_db {
 		command_noisy(@init_db);
 		$_repository = Git->repository(Repository => ".git");
 	}
-	command_noisy('config', 'core.autocrlf', 'false');
 	my $set;
 	my $pfx = "svn-remote.$Git::SVN::default_repo_id";
 	foreach my $i (keys %icv) {
@@ -1102,6 +1102,7 @@ sub cmd_info {
 	if ($@) {
 		$result .= "Repository Root: (offline)\n";
 	}
+	::_req_svn();
 	$result .= "Repository UUID: $uuid\n" unless $diff_status eq "A" &&
 		($SVN::Core::VERSION le '1.5.4' || $file_type ne "dir");
 	$result .= "Revision: " . ($diff_status eq "A" ? 0 : $rev) . "\n";
@@ -2997,7 +2998,7 @@ sub find_extra_svk_parents {
 	for my $ticket ( @tickets ) {
 		my ($uuid, $path, $rev) = split /:/, $ticket;
 		if ( $uuid eq $self->ra_uuid ) {
-			my $url = $self->rewrite_root || $self->{url};
+			my $url = $self->{url};
 			my $repos_root = $url;
 			my $branch_from = $path;
 			$branch_from =~ s{^/}{};
@@ -3205,7 +3206,7 @@ sub find_extra_svn_parents {
 	# are now marked as merge, we can add the tip as a parent.
 	my @merges = split "\n", $mergeinfo;
 	my @merge_tips;
-	my $url = $self->rewrite_root || $self->{url};
+	my $url = $self->{url};
 	my $uuid = $self->ra_uuid;
 	my %ranges;
 	for my $merge ( @merges ) {
@@ -3970,18 +3971,25 @@ sub username {
 
 sub _read_password {
 	my ($prompt, $realm) = @_;
-	print STDERR $prompt;
-	STDERR->flush;
-	require Term::ReadKey;
-	Term::ReadKey::ReadMode('noecho');
 	my $password = '';
-	while (defined(my $key = Term::ReadKey::ReadKey(0))) {
-		last if $key =~ /[\012\015]/; # \n\r
-		$password .= $key;
+	if (exists $ENV{GIT_ASKPASS}) {
+		open(PH, "-|", $ENV{GIT_ASKPASS}, $prompt);
+		$password = <PH>;
+		$password =~ s/[\012\015]//; # \n\r
+		close(PH);
+	} else {
+		print STDERR $prompt;
+		STDERR->flush;
+		require Term::ReadKey;
+		Term::ReadKey::ReadMode('noecho');
+		while (defined(my $key = Term::ReadKey::ReadKey(0))) {
+			last if $key =~ /[\012\015]/; # \n\r
+			$password .= $key;
+		}
+		Term::ReadKey::ReadMode('restore');
+		print STDERR "\n";
+		STDERR->flush;
 	}
-	Term::ReadKey::ReadMode('restore');
-	print STDERR "\n";
-	STDERR->flush;
 	$password;
 }
 
@@ -5465,7 +5473,12 @@ sub git_svn_log_cmd {
 
 # adapted from pager.c
 sub config_pager {
-	chomp(my $pager = command_oneline(qw(var GIT_PAGER)));
+	if (! -t *STDOUT) {
+		$ENV{GIT_PAGER_IN_USE} = 'false';
+		$pager = undef;
+		return;
+	}
+	chomp($pager = command_oneline(qw(var GIT_PAGER)));
 	if ($pager eq 'cat') {
 		$pager = undef;
 	}
@@ -5473,7 +5486,7 @@ sub config_pager {
 }
 
 sub run_pager {
-	return unless -t *STDOUT && defined $pager;
+	return unless defined $pager;
 	pipe my ($rfd, $wfd) or return;
 	defined(my $pid = fork) or ::fatal "Can't fork: $!";
 	if (!$pid) {
diff --git a/git.c b/git.c
index 90c6daf15..6bae30545 100644
--- a/git.c
+++ b/git.c
@@ -54,6 +54,9 @@ static int handle_options(const char ***argv, int *argc, int *envchanged)
 {
 	int handled = 0;
 
+	if (!getenv("GIT_ASKPASS") && getenv("SSH_ASKPASS"))
+		setenv("GIT_ASKPASS", getenv("SSH_ASKPASS"), 1);
+
 	while (*argc > 0) {
 		const char *cmd = (*argv)[0];
 		if (cmd[0] != '-')
@@ -343,6 +346,7 @@ static void handle_internal_command(int argc, const char **argv)
 		{ "mktree", cmd_mktree, RUN_SETUP },
 		{ "mv", cmd_mv, RUN_SETUP | NEED_WORK_TREE },
 		{ "name-rev", cmd_name_rev, RUN_SETUP },
+		{ "notes", cmd_notes, RUN_SETUP },
 		{ "pack-objects", cmd_pack_objects, RUN_SETUP },
 		{ "pack-redundant", cmd_pack_redundant, RUN_SETUP },
 		{ "patch-id", cmd_patch_id },
diff --git a/gitweb/README b/gitweb/README
index 6c2c8e125..ad6a04c46 100644
--- a/gitweb/README
+++ b/gitweb/README
@@ -312,12 +312,16 @@ If you want to have one URL for both gitweb and your http://
 repositories, you can configure apache like this:
 
 <VirtualHost *:80>
-    ServerName git.example.org
-    DocumentRoot /pub/git
-    SetEnv	GITWEB_CONFIG	/etc/gitweb.conf
+    ServerName		git.example.org
+    DocumentRoot	/pub/git
+    SetEnv			GITWEB_CONFIG	/etc/gitweb.conf
+
+    # turning on mod rewrite
     RewriteEngine on
+
     # make the front page an internal rewrite to the gitweb script
     RewriteRule ^/$  /cgi-bin/gitweb.cgi
+
     # make access for "dumb clients" work
     RewriteRule ^/(.*\.git/(?!/?(HEAD|info|objects|refs)).*)?$ /cgi-bin/gitweb.cgi%{REQUEST_URI}  [L,PT]
 </VirtualHost>
@@ -343,6 +347,63 @@ something like the following in your gitweb.conf (or gitweb_config.perl) file:
   $home_link = "/";
 
 
+Webserver configuration with multiple projects' root
+----------------------------------------------------
+
+If you want to use gitweb with several project roots you can edit your apache
+virtual host and gitweb.conf configuration files like this :
+
+virtual host configuration :
+
+<VirtualHost *:80>
+    ServerName			git.example.org
+    DocumentRoot		/pub/git
+    SetEnv				GITWEB_CONFIG	/etc/gitweb.conf
+
+    # turning on mod rewrite
+    RewriteEngine on
+
+    # make the front page an internal rewrite to the gitweb script
+    RewriteRule ^/$ 		/cgi-bin/gitweb.cgi [QSA,L,PT]
+
+    # look for a public_git folder in unix users' home
+    # http://git.example.org/~<user>/
+    RewriteRule ^/\~([^\/]+)(/|/gitweb.cgi)?$	/cgi-bin/gitweb.cgi [QSA,E=GITWEB_PROJECTROOT:/home/$1/public_git/,L,PT]
+
+    # http://git.example.org/+<user>/
+    #RewriteRule ^/\+([^\/]+)(/|/gitweb.cgi)?$	/cgi-bin/gitweb.cgi [QSA,E=GITWEB_PROJECTROOT:/home/$1/public_git/,L,PT]
+
+    # http://git.example.org/user/<user>/
+    #RewriteRule ^/user/([^\/]+)/(gitweb.cgi)?$	/cgi-bin/gitweb.cgi [QSA,E=GITWEB_PROJECTROOT:/home/$1/public_git/,L,PT]
+
+    # defined list of project roots
+    RewriteRule ^/scm(/|/gitweb.cgi)?$		/cgi-bin/gitweb.cgi [QSA,E=GITWEB_PROJECTROOT:/pub/scm/,L,PT]
+    RewriteRule ^/var(/|/gitweb.cgi)?$		/cgi-bin/gitweb.cgi [QSA,E=GITWEB_PROJECTROOT:/var/git/,L,PT]
+
+    # make access for "dumb clients" work
+    RewriteRule ^/(.*\.git/(?!/?(HEAD|info|objects|refs)).*)?$ /cgi-bin/gitweb.cgi%{REQUEST_URI}  [L,PT]
+</VirtualHost>
+
+gitweb.conf configuration :
+
+$projectroot = $ENV{'GITWEB_PROJECTROOT'} || "/pub/git";
+
+These configurations enable two things. First, each unix user (<user>) of the
+server will be able to browse through gitweb git repositories found in
+~/public_git/ with the following url : http://git.example.org/~<user>/
+
+If you do not want this feature on your server just remove the second rewrite rule.
+
+If you already use mod_userdir in your virtual host or you don't want to use
+the '~' as first character just comment or remove the second rewrite rule and
+uncomment one of the following according to what you want.
+
+Second, repositories found in /pub/scm/ and /var/git/ will be accesible
+through http://git.example.org/scm/ and http://git.example.org/var/.
+You can add as many project roots as you want by adding rewrite rules like the
+third and the fourth.
+
+
 PATH_INFO usage
 -----------------------
 If you enable PATH_INFO usage in gitweb by putting
diff --git a/gitweb/gitweb.perl b/gitweb/gitweb.perl
index 3c879b88f..a2d2283ec 100755
--- a/gitweb/gitweb.perl
+++ b/gitweb/gitweb.perl
@@ -454,7 +454,11 @@ sub gitweb_get_feature {
 		$feature{$name}{'sub'},
 		$feature{$name}{'override'},
 		@{$feature{$name}{'default'}});
-	if (!$override) { return @defaults; }
+	# project specific override is possible only if we have project
+	our $git_dir; # global variable, declared later
+	if (!$override || !defined $git_dir) {
+		return @defaults;
+	}
 	if (!defined $sub) {
 		warn "feature $name is not overridable";
 		return @defaults;
@@ -550,11 +554,14 @@ sub filter_snapshot_fmts {
 }
 
 our $GITWEB_CONFIG = $ENV{'GITWEB_CONFIG'} || "++GITWEB_CONFIG++";
+our $GITWEB_CONFIG_SYSTEM = $ENV{'GITWEB_CONFIG_SYSTEM'} || "++GITWEB_CONFIG_SYSTEM++";
+# die if there are errors parsing config file
 if (-e $GITWEB_CONFIG) {
 	do $GITWEB_CONFIG;
-} else {
-	our $GITWEB_CONFIG_SYSTEM = $ENV{'GITWEB_CONFIG_SYSTEM'} || "++GITWEB_CONFIG_SYSTEM++";
-	do $GITWEB_CONFIG_SYSTEM if -e $GITWEB_CONFIG_SYSTEM;
+	die $@ if $@;
+} elsif (-e $GITWEB_CONFIG_SYSTEM) {
+	do $GITWEB_CONFIG_SYSTEM;
+	die $@ if $@;
 }
 
 # Get loadavg of system, to compare against $maxload.
@@ -2209,6 +2216,9 @@ sub config_to_multi {
 sub git_get_project_config {
 	my ($key, $type) = @_;
 
+	# do we have project
+	return unless (defined $project && defined $git_dir);
+
 	# key sanity check
 	return unless ($key);
 	$key =~ s/^gitweb\.//;
diff --git a/grep.c b/grep.c
index b641305ff..fdc420626 100644
--- a/grep.c
+++ b/grep.c
@@ -11,8 +11,8 @@ void append_header_grep_pattern(struct grep_opt *opt, enum grep_header_field fie
 	p->no = 0;
 	p->token = GREP_PATTERN_HEAD;
 	p->field = field;
-	*opt->pattern_tail = p;
-	opt->pattern_tail = &p->next;
+	*opt->header_tail = p;
+	opt->header_tail = &p->next;
 	p->next = NULL;
 }
 
@@ -184,9 +184,26 @@ static struct grep_expr *compile_pattern_expr(struct grep_pat **list)
 void compile_grep_patterns(struct grep_opt *opt)
 {
 	struct grep_pat *p;
-
-	if (opt->all_match)
-		opt->extended = 1;
+	struct grep_expr *header_expr = NULL;
+
+	if (opt->header_list) {
+		p = opt->header_list;
+		header_expr = compile_pattern_expr(&p);
+		if (p)
+			die("incomplete pattern expression: %s", p->pattern);
+		for (p = opt->header_list; p; p = p->next) {
+			switch (p->token) {
+			case GREP_PATTERN: /* atom */
+			case GREP_PATTERN_HEAD:
+			case GREP_PATTERN_BODY:
+				compile_regexp(p, opt);
+				break;
+			default:
+				opt->extended = 1;
+				break;
+			}
+		}
+	}
 
 	for (p = opt->pattern_list; p; p = p->next) {
 		switch (p->token) {
@@ -201,7 +218,9 @@ void compile_grep_patterns(struct grep_opt *opt)
 		}
 	}
 
-	if (!opt->extended)
+	if (opt->all_match || header_expr)
+		opt->extended = 1;
+	else if (!opt->extended)
 		return;
 
 	/* Then bundle them up in an expression.
@@ -212,6 +231,21 @@ void compile_grep_patterns(struct grep_opt *opt)
 		opt->pattern_expression = compile_pattern_expr(&p);
 	if (p)
 		die("incomplete pattern expression: %s", p->pattern);
+
+	if (!header_expr)
+		return;
+
+	if (opt->pattern_expression) {
+		struct grep_expr *z;
+		z = xcalloc(1, sizeof(*z));
+		z->node = GREP_NODE_OR;
+		z->u.binary.left = opt->pattern_expression;
+		z->u.binary.right = header_expr;
+		opt->pattern_expression = z;
+	} else {
+		opt->pattern_expression = header_expr;
+	}
+	opt->all_match = 1;
 }
 
 static void free_pattern_expr(struct grep_expr *x)
diff --git a/grep.h b/grep.h
index 2c4bdaca8..89342e5b4 100644
--- a/grep.h
+++ b/grep.h
@@ -59,6 +59,8 @@ struct grep_expr {
 struct grep_opt {
 	struct grep_pat *pattern_list;
 	struct grep_pat **pattern_tail;
+	struct grep_pat *header_list;
+	struct grep_pat **header_tail;
 	struct grep_expr *pattern_expression;
 	const char *prefix;
 	int prefix_length;
diff --git a/http-fetch.c b/http-fetch.c
index ffd0ad7e2..762c750d7 100644
--- a/http-fetch.c
+++ b/http-fetch.c
@@ -1,5 +1,6 @@
 #include "cache.h"
 #include "exec_cmd.h"
+#include "http.h"
 #include "walker.h"
 
 static const char http_fetch_usage[] = "git http-fetch "
@@ -69,7 +70,8 @@ int main(int argc, const char **argv)
 		url = rewritten_url;
 	}
 
-	walker = get_http_walker(url, NULL);
+	http_init(NULL);
+	walker = get_http_walker(url);
 	walker->get_tree = get_tree;
 	walker->get_history = get_history;
 	walker->get_all = get_all;
@@ -89,6 +91,7 @@ int main(int argc, const char **argv)
 	}
 
 	walker_free(walker);
+	http_cleanup();
 
 	free(rewritten_url);
 
diff --git a/http-push.c b/http-push.c
index 432b20f2d..415b1ab0a 100644
--- a/http-push.c
+++ b/http-push.c
@@ -1965,7 +1965,7 @@ int main(int argc, char **argv)
 		}
 
 		if (!hashcmp(ref->old_sha1, ref->peer_ref->new_sha1)) {
-			if (push_verbosely || 1)
+			if (push_verbosely)
 				fprintf(stderr, "'%s': up-to-date\n", ref->name);
 			if (helper_status)
 				printf("ok %s up to date\n", ref->name);
diff --git a/http-walker.c b/http-walker.c
index 700bc1311..ef99ae647 100644
--- a/http-walker.c
+++ b/http-walker.c
@@ -543,17 +543,30 @@ static int fetch_ref(struct walker *walker, struct ref *ref)
 
 static void cleanup(struct walker *walker)
 {
-	http_cleanup();
+	struct walker_data *data = walker->data;
+	struct alt_base *alt, *alt_next;
+
+	if (data) {
+		alt = data->alt;
+		while (alt) {
+			alt_next = alt->next;
+
+			free(alt->base);
+			free(alt);
+
+			alt = alt_next;
+		}
+		free(data);
+		walker->data = NULL;
+	}
 }
 
-struct walker *get_http_walker(const char *url, struct remote *remote)
+struct walker *get_http_walker(const char *url)
 {
 	char *s;
 	struct walker_data *data = xmalloc(sizeof(struct walker_data));
 	struct walker *walker = xmalloc(sizeof(struct walker));
 
-	http_init(remote);
-
 	data->alt = xmalloc(sizeof(*data->alt));
 	data->alt->base = xmalloc(strlen(url) + 1);
 	strcpy(data->alt->base, url);
diff --git a/http.c b/http.c
index deab59551..4814217c6 100644
--- a/http.c
+++ b/http.c
@@ -204,7 +204,7 @@ static void init_curl_http_auth(CURL *result)
 	if (user_name) {
 		struct strbuf up = STRBUF_INIT;
 		if (!user_pass)
-			user_pass = xstrdup(getpass("Password: "));
+			user_pass = xstrdup(git_getpass("Password: "));
 		strbuf_addf(&up, "%s:%s", user_name, user_pass);
 		curl_easy_setopt(result, CURLOPT_USERPWD,
 				 strbuf_detach(&up, NULL));
@@ -219,7 +219,7 @@ static int has_cert_password(void)
 		return 0;
 	/* Only prompt the user once. */
 	ssl_cert_password_required = -1;
-	ssl_cert_password = getpass("Certificate Password: ");
+	ssl_cert_password = git_getpass("Certificate Password: ");
 	if (ssl_cert_password != NULL) {
 		ssl_cert_password = xstrdup(ssl_cert_password);
 		return 1;
diff --git a/imap-send.c b/imap-send.c
index 5631930bc..aeb2985b8 100644
--- a/imap-send.c
+++ b/imap-send.c
@@ -27,6 +27,9 @@
 #include "run-command.h"
 #ifdef NO_OPENSSL
 typedef void *SSL;
+#else
+#include <openssl/evp.h>
+#include <openssl/hmac.h>
 #endif
 
 struct store_conf {
@@ -139,6 +142,20 @@ struct imap_server_conf {
 	int use_ssl;
 	int ssl_verify;
 	int use_html;
+	char *auth_method;
+};
+
+static struct imap_server_conf server = {
+	NULL,	/* name */
+	NULL,	/* tunnel */
+	NULL,	/* host */
+	0,	/* port */
+	NULL,	/* user */
+	NULL,	/* pass */
+	0,   	/* use_ssl */
+	1,   	/* ssl_verify */
+	0,   	/* use_html */
+	NULL,	/* auth_method */
 };
 
 struct imap_store_conf {
@@ -213,6 +230,7 @@ enum CAPABILITY {
 	LITERALPLUS,
 	NAMESPACE,
 	STARTTLS,
+	AUTH_CRAM_MD5,
 };
 
 static const char *cap_list[] = {
@@ -221,6 +239,7 @@ static const char *cap_list[] = {
 	"LITERAL+",
 	"NAMESPACE",
 	"STARTTLS",
+	"AUTH=CRAM-MD5",
 };
 
 #define RESP_OK    0
@@ -948,6 +967,87 @@ static void imap_close_store(struct store *ctx)
 	free(ctx);
 }
 
+#ifndef NO_OPENSSL
+
+/*
+ * hexchar() and cram() functions are based on the code from the isync
+ * project (http://isync.sf.net/).
+ */
+static char hexchar(unsigned int b)
+{
+	return b < 10 ? '0' + b : 'a' + (b - 10);
+}
+
+#define ENCODED_SIZE(n) (4*((n+2)/3))
+static char *cram(const char *challenge_64, const char *user, const char *pass)
+{
+	int i, resp_len, encoded_len, decoded_len;
+	HMAC_CTX hmac;
+	unsigned char hash[16];
+	char hex[33];
+	char *response, *response_64, *challenge;
+
+	/*
+	 * length of challenge_64 (i.e. base-64 encoded string) is a good
+	 * enough upper bound for challenge (decoded result).
+	 */
+	encoded_len = strlen(challenge_64);
+	challenge = xmalloc(encoded_len);
+	decoded_len = EVP_DecodeBlock((unsigned char *)challenge,
+				      (unsigned char *)challenge_64, encoded_len);
+	if (decoded_len < 0)
+		die("invalid challenge %s", challenge_64);
+	HMAC_Init(&hmac, (unsigned char *)pass, strlen(pass), EVP_md5());
+	HMAC_Update(&hmac, (unsigned char *)challenge, decoded_len);
+	HMAC_Final(&hmac, hash, NULL);
+	HMAC_CTX_cleanup(&hmac);
+
+	hex[32] = 0;
+	for (i = 0; i < 16; i++) {
+		hex[2 * i] = hexchar((hash[i] >> 4) & 0xf);
+		hex[2 * i + 1] = hexchar(hash[i] & 0xf);
+	}
+
+	/* response: "<user> <digest in hex>" */
+	resp_len = strlen(user) + 1 + strlen(hex) + 1;
+	response = xmalloc(resp_len);
+	sprintf(response, "%s %s", user, hex);
+
+	response_64 = xmalloc(ENCODED_SIZE(resp_len) + 1);
+	encoded_len = EVP_EncodeBlock((unsigned char *)response_64,
+				      (unsigned char *)response, resp_len);
+	if (encoded_len < 0)
+		die("EVP_EncodeBlock error");
+	response_64[encoded_len] = '\0';
+	return (char *)response_64;
+}
+
+#else
+
+static char *cram(const char *challenge_64, const char *user, const char *pass)
+{
+	die("If you want to use CRAM-MD5 authenticate method, "
+	    "you have to build git-imap-send with OpenSSL library.");
+}
+
+#endif
+
+static int auth_cram_md5(struct imap_store *ctx, struct imap_cmd *cmd, const char *prompt)
+{
+	int ret;
+	char *response;
+
+	response = cram(prompt, server.user, server.pass);
+
+	ret = socket_write(&ctx->imap->buf.sock, response, strlen(response));
+	if (ret != strlen(response))
+		return error("IMAP error: sending response failed\n");
+
+	free(response);
+
+	return 0;
+}
+
 static struct store *imap_open_store(struct imap_server_conf *srvc)
 {
 	struct imap_store *ctx;
@@ -1107,7 +1207,7 @@ static struct store *imap_open_store(struct imap_server_conf *srvc)
 		if (!srvc->pass) {
 			char prompt[80];
 			sprintf(prompt, "Password (%s@%s): ", srvc->user, srvc->host);
-			arg = getpass(prompt);
+			arg = git_getpass(prompt);
 			if (!arg) {
 				perror("getpass");
 				exit(1);
@@ -1129,9 +1229,34 @@ static struct store *imap_open_store(struct imap_server_conf *srvc)
 		if (!imap->buf.sock.ssl)
 			imap_warn("*** IMAP Warning *** Password is being "
 				  "sent in the clear\n");
-		if (imap_exec(ctx, NULL, "LOGIN \"%s\" \"%s\"", srvc->user, srvc->pass) != RESP_OK) {
-			fprintf(stderr, "IMAP error: LOGIN failed\n");
-			goto bail;
+
+		if (srvc->auth_method) {
+			struct imap_cmd_cb cb;
+
+			if (!strcmp(srvc->auth_method, "CRAM-MD5")) {
+				if (!CAP(AUTH_CRAM_MD5)) {
+					fprintf(stderr, "You specified"
+						"CRAM-MD5 as authentication method, "
+						"but %s doesn't support it.\n", srvc->host);
+					goto bail;
+				}
+				/* CRAM-MD5 */
+
+				memset(&cb, 0, sizeof(cb));
+				cb.cont = auth_cram_md5;
+				if (imap_exec(ctx, &cb, "AUTHENTICATE CRAM-MD5") != RESP_OK) {
+					fprintf(stderr, "IMAP error: AUTHENTICATE CRAM-MD5 failed\n");
+					goto bail;
+				}
+			} else {
+				fprintf(stderr, "Unknown authentication method:%s\n", srvc->host);
+				goto bail;
+			}
+		} else {
+			if (imap_exec(ctx, NULL, "LOGIN \"%s\" \"%s\"", srvc->user, srvc->pass) != RESP_OK) {
+				fprintf(stderr, "IMAP error: LOGIN failed\n");
+				goto bail;
+			}
 		}
 	} /* !preauth */
 
@@ -1348,18 +1473,6 @@ static int split_msg(struct msg_data *all_msgs, struct msg_data *msg, int *ofs)
 	return 1;
 }
 
-static struct imap_server_conf server = {
-	NULL,	/* name */
-	NULL,	/* tunnel */
-	NULL,	/* host */
-	0,	/* port */
-	NULL,	/* user */
-	NULL,	/* pass */
-	0,   	/* use_ssl */
-	1,   	/* ssl_verify */
-	0,   	/* use_html */
-};
-
 static char *imap_folder;
 
 static int git_imap_config(const char *key, const char *val, void *cb)
@@ -1399,6 +1512,9 @@ static int git_imap_config(const char *key, const char *val, void *cb)
 		server.port = git_config_int(key, val);
 	else if (!strcmp("tunnel", key))
 		server.tunnel = xstrdup(val);
+	else if (!strcmp("authmethod", key))
+		server.auth_method = xstrdup(val);
+
 	return 0;
 }
 
diff --git a/ll-merge.c b/ll-merge.c
index 4c7f11ba8..82c7742e4 100644
--- a/ll-merge.c
+++ b/ll-merge.c
@@ -63,8 +63,6 @@ static int ll_xdl_merge(const struct ll_merge_driver *drv_unused,
 			int flag, int marker_size)
 {
 	xmparam_t xmp;
-	int style = 0;
-	int favor = (flag >> 1) & 03;
 
 	if (buffer_is_binary(orig->ptr, orig->size) ||
 	    buffer_is_binary(src1->ptr, src1->size) ||
@@ -79,15 +77,13 @@ static int ll_xdl_merge(const struct ll_merge_driver *drv_unused,
 	}
 
 	memset(&xmp, 0, sizeof(xmp));
+	xmp.level = XDL_MERGE_ZEALOUS;
+	xmp.favor= (flag >> 1) & 03;
 	if (git_xmerge_style >= 0)
-		style = git_xmerge_style;
+		xmp.style = git_xmerge_style;
 	if (marker_size > 0)
 		xmp.marker_size = marker_size;
-	return xdl_merge(orig,
-			 src1, name1,
-			 src2, name2,
-			 &xmp, XDL_MERGE_FLAGS(XDL_MERGE_ZEALOUS, style, favor),
-			 result);
+	return xdl_merge(orig, src1, name1, src2, name2, &xmp, result);
 }
 
 static int ll_union_merge(const struct ll_merge_driver *drv_unused,
@@ -98,44 +94,11 @@ static int ll_union_merge(const struct ll_merge_driver *drv_unused,
 			  mmfile_t *src2, const char *name2,
 			  int flag, int marker_size)
 {
-	char *src, *dst;
-	long size;
-	int status, saved_style;
-
-	/* We have to force the RCS "merge" style */
-	saved_style = git_xmerge_style;
-	git_xmerge_style = 0;
-	status = ll_xdl_merge(drv_unused, result, path_unused,
-			      orig, src1, NULL, src2, NULL,
-			      flag, marker_size);
-	git_xmerge_style = saved_style;
-	if (status <= 0)
-		return status;
-	size = result->size;
-	src = dst = result->ptr;
-	while (size) {
-		char ch;
-		if ((marker_size < size) &&
-		    (*src == '<' || *src == '=' || *src == '>')) {
-			int i;
-			ch = *src;
-			for (i = 0; i < marker_size; i++)
-				if (src[i] != ch)
-					goto not_a_marker;
-			if (src[marker_size] != '\n')
-				goto not_a_marker;
-			src += marker_size + 1;
-			size -= marker_size + 1;
-			continue;
-		}
-	not_a_marker:
-		do {
-			ch = *src++;
-			*dst++ = ch;
-			size--;
-		} while (ch != '\n' && size);
-	}
-	result->size = dst - result->ptr;
+	/* Use union favor */
+	flag = (flag & 1) | (XDL_MERGE_FAVOR_UNION << 1);
+	return ll_xdl_merge(drv_unused, result, path_unused,
+			    orig, src1, NULL, src2, NULL,
+			    flag, marker_size);
 	return 0;
 }
 
diff --git a/merge-recursive.c b/merge-recursive.c
index cb53b01c1..195ebf974 100644
--- a/merge-recursive.c
+++ b/merge-recursive.c
@@ -599,23 +599,6 @@ struct merge_file_info
 		 merge:1;
 };
 
-static void fill_mm(const unsigned char *sha1, mmfile_t *mm)
-{
-	unsigned long size;
-	enum object_type type;
-
-	if (!hashcmp(sha1, null_sha1)) {
-		mm->ptr = xstrdup("");
-		mm->size = 0;
-		return;
-	}
-
-	mm->ptr = read_sha1_file(sha1, &type, &size);
-	if (!mm->ptr || type != OBJ_BLOB)
-		die("unable to read blob object %s", sha1_to_hex(sha1));
-	mm->size = size;
-}
-
 static int merge_3way(struct merge_options *o,
 		      mmbuffer_t *result_buf,
 		      struct diff_filespec *one,
@@ -653,9 +636,9 @@ static int merge_3way(struct merge_options *o,
 		name2 = xstrdup(mkpath("%s", branch2));
 	}
 
-	fill_mm(one->sha1, &orig);
-	fill_mm(a->sha1, &src1);
-	fill_mm(b->sha1, &src2);
+	read_mmblob(&orig, one->sha1);
+	read_mmblob(&src1, a->sha1);
+	read_mmblob(&src2, b->sha1);
 
 	merge_status = ll_merge(result_buf, a->path, &orig,
 				&src1, name1, &src2, name2,
diff --git a/notes.c b/notes.c
index 023adce98..07941b723 100644
--- a/notes.c
+++ b/notes.c
@@ -1,7 +1,7 @@
 #include "cache.h"
-#include "commit.h"
 #include "notes.h"
-#include "refs.h"
+#include "blob.h"
+#include "tree.h"
 #include "utf8.h"
 #include "strbuf.h"
 #include "tree-walk.h"
@@ -25,10 +25,10 @@ struct int_node {
 /*
  * Leaf nodes come in two variants, note entries and subtree entries,
  * distinguished by the LSb of the leaf node pointer (see above).
- * As a note entry, the key is the SHA1 of the referenced commit, and the
+ * As a note entry, the key is the SHA1 of the referenced object, and the
  * value is the SHA1 of the note object.
  * As a subtree entry, the key is the prefix SHA1 (w/trailing NULs) of the
- * referenced commit, using the last byte of the key to store the length of
+ * referenced object, using the last byte of the key to store the length of
  * the prefix. The value is the SHA1 of the tree object containing the notes
  * subtree.
  */
@@ -37,6 +37,21 @@ struct leaf_node {
 	unsigned char val_sha1[20];
 };
 
+/*
+ * A notes tree may contain entries that are not notes, and that do not follow
+ * the naming conventions of notes. There are typically none/few of these, but
+ * we still need to keep track of them. Keep a simple linked list sorted alpha-
+ * betically on the non-note path. The list is populated when parsing tree
+ * objects in load_subtree(), and the non-notes are correctly written back into
+ * the tree objects produced by write_notes_tree().
+ */
+struct non_note {
+	struct non_note *next; /* grounded (last->next == NULL) */
+	char *path;
+	unsigned int mode;
+	unsigned char sha1[20];
+};
+
 #define PTR_TYPE_NULL     0
 #define PTR_TYPE_INTERNAL 1
 #define PTR_TYPE_NOTE     2
@@ -46,17 +61,15 @@ struct leaf_node {
 #define CLR_PTR_TYPE(ptr)       ((void *) ((uintptr_t) (ptr) & ~3))
 #define SET_PTR_TYPE(ptr, type) ((void *) ((uintptr_t) (ptr) | (type)))
 
-#define GET_NIBBLE(n, sha1) (((sha1[n >> 1]) >> ((~n & 0x01) << 2)) & 0x0f)
+#define GET_NIBBLE(n, sha1) (((sha1[(n) >> 1]) >> ((~(n) & 0x01) << 2)) & 0x0f)
 
 #define SUBTREE_SHA1_PREFIXCMP(key_sha1, subtree_sha1) \
 	(memcmp(key_sha1, subtree_sha1, subtree_sha1[19]))
 
-static struct int_node root_node;
+struct notes_tree default_notes_tree;
 
-static int initialized;
-
-static void load_subtree(struct leaf_node *subtree, struct int_node *node,
-		unsigned int n);
+static void load_subtree(struct notes_tree *t, struct leaf_node *subtree,
+		struct int_node *node, unsigned int n);
 
 /*
  * Search the tree until the appropriate location for the given key is found:
@@ -73,7 +86,7 @@ static void load_subtree(struct leaf_node *subtree, struct int_node *node,
  *      - an unused leaf node (NULL)
  *      In any case, set *tree and *n, and return pointer to the tree location.
  */
-static void **note_tree_search(struct int_node **tree,
+static void **note_tree_search(struct notes_tree *t, struct int_node **tree,
 		unsigned char *n, const unsigned char *key_sha1)
 {
 	struct leaf_node *l;
@@ -85,27 +98,27 @@ static void **note_tree_search(struct int_node **tree,
 		if (!SUBTREE_SHA1_PREFIXCMP(key_sha1, l->key_sha1)) {
 			/* unpack tree and resume search */
 			(*tree)->a[0] = NULL;
-			load_subtree(l, *tree, *n);
+			load_subtree(t, l, *tree, *n);
 			free(l);
-			return note_tree_search(tree, n, key_sha1);
+			return note_tree_search(t, tree, n, key_sha1);
 		}
 	}
 
 	i = GET_NIBBLE(*n, key_sha1);
 	p = (*tree)->a[i];
-	switch(GET_PTR_TYPE(p)) {
+	switch (GET_PTR_TYPE(p)) {
 	case PTR_TYPE_INTERNAL:
 		*tree = CLR_PTR_TYPE(p);
 		(*n)++;
-		return note_tree_search(tree, n, key_sha1);
+		return note_tree_search(t, tree, n, key_sha1);
 	case PTR_TYPE_SUBTREE:
 		l = (struct leaf_node *) CLR_PTR_TYPE(p);
 		if (!SUBTREE_SHA1_PREFIXCMP(key_sha1, l->key_sha1)) {
 			/* unpack tree and resume search */
 			(*tree)->a[i] = NULL;
-			load_subtree(l, *tree, *n);
+			load_subtree(t, l, *tree, *n);
 			free(l);
-			return note_tree_search(tree, n, key_sha1);
+			return note_tree_search(t, tree, n, key_sha1);
 		}
 		/* fall through */
 	default:
@@ -118,10 +131,11 @@ static void **note_tree_search(struct int_node **tree,
  * Search to the tree location appropriate for the given key:
  * If a note entry with matching key, return the note entry, else return NULL.
  */
-static struct leaf_node *note_tree_find(struct int_node *tree, unsigned char n,
+static struct leaf_node *note_tree_find(struct notes_tree *t,
+		struct int_node *tree, unsigned char n,
 		const unsigned char *key_sha1)
 {
-	void **p = note_tree_search(&tree, &n, key_sha1);
+	void **p = note_tree_search(t, &tree, &n, key_sha1);
 	if (GET_PTR_TYPE(*p) == PTR_TYPE_NOTE) {
 		struct leaf_node *l = (struct leaf_node *) CLR_PTR_TYPE(*p);
 		if (!hashcmp(key_sha1, l->key_sha1))
@@ -130,55 +144,12 @@ static struct leaf_node *note_tree_find(struct int_node *tree, unsigned char n,
 	return NULL;
 }
 
-/* Create a new blob object by concatenating the two given blob objects */
-static int concatenate_notes(unsigned char *cur_sha1,
-		const unsigned char *new_sha1)
-{
-	char *cur_msg, *new_msg, *buf;
-	unsigned long cur_len, new_len, buf_len;
-	enum object_type cur_type, new_type;
-	int ret;
-
-	/* read in both note blob objects */
-	new_msg = read_sha1_file(new_sha1, &new_type, &new_len);
-	if (!new_msg || !new_len || new_type != OBJ_BLOB) {
-		free(new_msg);
-		return 0;
-	}
-	cur_msg = read_sha1_file(cur_sha1, &cur_type, &cur_len);
-	if (!cur_msg || !cur_len || cur_type != OBJ_BLOB) {
-		free(cur_msg);
-		free(new_msg);
-		hashcpy(cur_sha1, new_sha1);
-		return 0;
-	}
-
-	/* we will separate the notes by a newline anyway */
-	if (cur_msg[cur_len - 1] == '\n')
-		cur_len--;
-
-	/* concatenate cur_msg and new_msg into buf */
-	buf_len = cur_len + 1 + new_len;
-	buf = (char *) xmalloc(buf_len);
-	memcpy(buf, cur_msg, cur_len);
-	buf[cur_len] = '\n';
-	memcpy(buf + cur_len + 1, new_msg, new_len);
-
-	free(cur_msg);
-	free(new_msg);
-
-	/* create a new blob object from buf */
-	ret = write_sha1_file(buf, buf_len, "blob", cur_sha1);
-	free(buf);
-	return ret;
-}
-
 /*
  * To insert a leaf_node:
  * Search to the tree location appropriate for the given leaf_node's key:
  * - If location is unused (NULL), store the tweaked pointer directly there
  * - If location holds a note entry that matches the note-to-be-inserted, then
- *   concatenate the two notes.
+ *   combine the two notes (by calling the given combine_notes function).
  * - If location holds a note entry that matches the subtree-to-be-inserted,
  *   then unpack the subtree-to-be-inserted into the location.
  * - If location holds a matching subtree entry, unpack the subtree at that
@@ -186,16 +157,17 @@ static int concatenate_notes(unsigned char *cur_sha1,
  * - Else, create a new int_node, holding both the node-at-location and the
  *   node-to-be-inserted, and store the new int_node into the location.
  */
-static void note_tree_insert(struct int_node *tree, unsigned char n,
-		struct leaf_node *entry, unsigned char type)
+static void note_tree_insert(struct notes_tree *t, struct int_node *tree,
+		unsigned char n, struct leaf_node *entry, unsigned char type,
+		combine_notes_fn combine_notes)
 {
 	struct int_node *new_node;
 	struct leaf_node *l;
-	void **p = note_tree_search(&tree, &n, entry->key_sha1);
+	void **p = note_tree_search(t, &tree, &n, entry->key_sha1);
 
 	assert(GET_PTR_TYPE(entry) == 0); /* no type bits set */
 	l = (struct leaf_node *) CLR_PTR_TYPE(*p);
-	switch(GET_PTR_TYPE(*p)) {
+	switch (GET_PTR_TYPE(*p)) {
 	case PTR_TYPE_NULL:
 		assert(!*p);
 		*p = SET_PTR_TYPE(entry, type);
@@ -208,12 +180,11 @@ static void note_tree_insert(struct int_node *tree, unsigned char n,
 				if (!hashcmp(l->val_sha1, entry->val_sha1))
 					return;
 
-				if (concatenate_notes(l->val_sha1,
-						entry->val_sha1))
-					die("failed to concatenate note %s "
-					    "into note %s for commit %s",
-					    sha1_to_hex(entry->val_sha1),
+				if (combine_notes(l->val_sha1, entry->val_sha1))
+					die("failed to combine notes %s and %s"
+					    " for object %s",
 					    sha1_to_hex(l->val_sha1),
+					    sha1_to_hex(entry->val_sha1),
 					    sha1_to_hex(l->key_sha1));
 				free(entry);
 				return;
@@ -223,7 +194,7 @@ static void note_tree_insert(struct int_node *tree, unsigned char n,
 			if (!SUBTREE_SHA1_PREFIXCMP(l->key_sha1,
 						    entry->key_sha1)) {
 				/* unpack 'entry' */
-				load_subtree(entry, tree, n);
+				load_subtree(t, entry, tree, n);
 				free(entry);
 				return;
 			}
@@ -234,9 +205,10 @@ static void note_tree_insert(struct int_node *tree, unsigned char n,
 		if (!SUBTREE_SHA1_PREFIXCMP(entry->key_sha1, l->key_sha1)) {
 			/* unpack 'l' and restart insert */
 			*p = NULL;
-			load_subtree(l, tree, n);
+			load_subtree(t, l, tree, n);
 			free(l);
-			note_tree_insert(tree, n, entry, type);
+			note_tree_insert(t, tree, n, entry, type,
+					 combine_notes);
 			return;
 		}
 		break;
@@ -246,9 +218,83 @@ static void note_tree_insert(struct int_node *tree, unsigned char n,
 	assert(GET_PTR_TYPE(*p) == PTR_TYPE_NOTE ||
 	       GET_PTR_TYPE(*p) == PTR_TYPE_SUBTREE);
 	new_node = (struct int_node *) xcalloc(sizeof(struct int_node), 1);
-	note_tree_insert(new_node, n + 1, l, GET_PTR_TYPE(*p));
+	note_tree_insert(t, new_node, n + 1, l, GET_PTR_TYPE(*p),
+			 combine_notes);
 	*p = SET_PTR_TYPE(new_node, PTR_TYPE_INTERNAL);
-	note_tree_insert(new_node, n + 1, entry, type);
+	note_tree_insert(t, new_node, n + 1, entry, type, combine_notes);
+}
+
+/*
+ * How to consolidate an int_node:
+ * If there are > 1 non-NULL entries, give up and return non-zero.
+ * Otherwise replace the int_node at the given index in the given parent node
+ * with the only entry (or a NULL entry if no entries) from the given tree,
+ * and return 0.
+ */
+static int note_tree_consolidate(struct int_node *tree,
+	struct int_node *parent, unsigned char index)
+{
+	unsigned int i;
+	void *p = NULL;
+
+	assert(tree && parent);
+	assert(CLR_PTR_TYPE(parent->a[index]) == tree);
+
+	for (i = 0; i < 16; i++) {
+		if (GET_PTR_TYPE(tree->a[i]) != PTR_TYPE_NULL) {
+			if (p) /* more than one entry */
+				return -2;
+			p = tree->a[i];
+		}
+	}
+
+	/* replace tree with p in parent[index] */
+	parent->a[index] = p;
+	free(tree);
+	return 0;
+}
+
+/*
+ * To remove a leaf_node:
+ * Search to the tree location appropriate for the given leaf_node's key:
+ * - If location does not hold a matching entry, abort and do nothing.
+ * - Replace the matching leaf_node with a NULL entry (and free the leaf_node).
+ * - Consolidate int_nodes repeatedly, while walking up the tree towards root.
+ */
+static void note_tree_remove(struct notes_tree *t, struct int_node *tree,
+		unsigned char n, struct leaf_node *entry)
+{
+	struct leaf_node *l;
+	struct int_node *parent_stack[20];
+	unsigned char i, j;
+	void **p = note_tree_search(t, &tree, &n, entry->key_sha1);
+
+	assert(GET_PTR_TYPE(entry) == 0); /* no type bits set */
+	if (GET_PTR_TYPE(*p) != PTR_TYPE_NOTE)
+		return; /* type mismatch, nothing to remove */
+	l = (struct leaf_node *) CLR_PTR_TYPE(*p);
+	if (hashcmp(l->key_sha1, entry->key_sha1))
+		return; /* key mismatch, nothing to remove */
+
+	/* we have found a matching entry */
+	free(l);
+	*p = SET_PTR_TYPE(NULL, PTR_TYPE_NULL);
+
+	/* consolidate this tree level, and parent levels, if possible */
+	if (!n)
+		return; /* cannot consolidate top level */
+	/* first, build stack of ancestors between root and current node */
+	parent_stack[0] = t->root;
+	for (i = 0; i < n; i++) {
+		j = GET_NIBBLE(i, entry->key_sha1);
+		parent_stack[i + 1] = CLR_PTR_TYPE(parent_stack[i]->a[j]);
+	}
+	assert(i == n && parent_stack[i] == tree);
+	/* next, unwind stack until note_tree_consolidate() is done */
+	while (i > 0 &&
+	       !note_tree_consolidate(parent_stack[i], parent_stack[i - 1],
+				      GET_NIBBLE(i - 1, entry->key_sha1)))
+		i--;
 }
 
 /* Free the entire notes data contained in the given tree */
@@ -257,7 +303,7 @@ static void note_tree_free(struct int_node *tree)
 	unsigned int i;
 	for (i = 0; i < 16; i++) {
 		void *p = tree->a[i];
-		switch(GET_PTR_TYPE(p)) {
+		switch (GET_PTR_TYPE(p)) {
 		case PTR_TYPE_INTERNAL:
 			note_tree_free(CLR_PTR_TYPE(p));
 			/* fall through */
@@ -274,7 +320,7 @@ static void note_tree_free(struct int_node *tree)
  * - hex_len  - Length of above segment. Must be multiple of 2 between 0 and 40
  * - sha1     - Partial SHA1 value is written here
  * - sha1_len - Max #bytes to store in sha1, Must be >= hex_len / 2, and < 20
- * Returns -1 on error (invalid arguments or invalid SHA1 (not in hex format).
+ * Returns -1 on error (invalid arguments or invalid SHA1 (not in hex format)).
  * Otherwise, returns number of bytes written to sha1 (i.e. hex_len / 2).
  * Pads sha1 with NULs up to sha1_len (not included in returned length).
  */
@@ -296,14 +342,67 @@ static int get_sha1_hex_segment(const char *hex, unsigned int hex_len,
 	return len;
 }
 
-static void load_subtree(struct leaf_node *subtree, struct int_node *node,
-		unsigned int n)
+static int non_note_cmp(const struct non_note *a, const struct non_note *b)
+{
+	return strcmp(a->path, b->path);
+}
+
+static void add_non_note(struct notes_tree *t, const char *path,
+		unsigned int mode, const unsigned char *sha1)
+{
+	struct non_note *p = t->prev_non_note, *n;
+	n = (struct non_note *) xmalloc(sizeof(struct non_note));
+	n->next = NULL;
+	n->path = xstrdup(path);
+	n->mode = mode;
+	hashcpy(n->sha1, sha1);
+	t->prev_non_note = n;
+
+	if (!t->first_non_note) {
+		t->first_non_note = n;
+		return;
+	}
+
+	if (non_note_cmp(p, n) < 0)
+		; /* do nothing  */
+	else if (non_note_cmp(t->first_non_note, n) <= 0)
+		p = t->first_non_note;
+	else {
+		/* n sorts before t->first_non_note */
+		n->next = t->first_non_note;
+		t->first_non_note = n;
+		return;
+	}
+
+	/* n sorts equal or after p */
+	while (p->next && non_note_cmp(p->next, n) <= 0)
+		p = p->next;
+
+	if (non_note_cmp(p, n) == 0) { /* n ~= p; overwrite p with n */
+		assert(strcmp(p->path, n->path) == 0);
+		p->mode = n->mode;
+		hashcpy(p->sha1, n->sha1);
+		free(n);
+		t->prev_non_note = p;
+		return;
+	}
+
+	/* n sorts between p and p->next */
+	n->next = p->next;
+	p->next = n;
+}
+
+static void load_subtree(struct notes_tree *t, struct leaf_node *subtree,
+		struct int_node *node, unsigned int n)
 {
-	unsigned char commit_sha1[20];
+	unsigned char object_sha1[20];
 	unsigned int prefix_len;
 	void *buf;
 	struct tree_desc desc;
 	struct name_entry entry;
+	int len, path_len;
+	unsigned char type;
+	struct leaf_node *l;
 
 	buf = fill_tree_descriptor(&desc, subtree->val_sha1);
 	if (!buf)
@@ -312,86 +411,588 @@ static void load_subtree(struct leaf_node *subtree, struct int_node *node,
 
 	prefix_len = subtree->key_sha1[19];
 	assert(prefix_len * 2 >= n);
-	memcpy(commit_sha1, subtree->key_sha1, prefix_len);
+	memcpy(object_sha1, subtree->key_sha1, prefix_len);
 	while (tree_entry(&desc, &entry)) {
-		int len = get_sha1_hex_segment(entry.path, strlen(entry.path),
-				commit_sha1 + prefix_len, 20 - prefix_len);
+		path_len = strlen(entry.path);
+		len = get_sha1_hex_segment(entry.path, path_len,
+				object_sha1 + prefix_len, 20 - prefix_len);
 		if (len < 0)
-			continue; /* entry.path is not a SHA1 sum. Skip */
+			goto handle_non_note; /* entry.path is not a SHA1 */
 		len += prefix_len;
 
 		/*
-		 * If commit SHA1 is complete (len == 20), assume note object
-		 * If commit SHA1 is incomplete (len < 20), assume note subtree
+		 * If object SHA1 is complete (len == 20), assume note object
+		 * If object SHA1 is incomplete (len < 20), and current
+		 * component consists of 2 hex chars, assume note subtree
 		 */
 		if (len <= 20) {
-			unsigned char type = PTR_TYPE_NOTE;
-			struct leaf_node *l = (struct leaf_node *)
+			type = PTR_TYPE_NOTE;
+			l = (struct leaf_node *)
 				xcalloc(sizeof(struct leaf_node), 1);
-			hashcpy(l->key_sha1, commit_sha1);
+			hashcpy(l->key_sha1, object_sha1);
 			hashcpy(l->val_sha1, entry.sha1);
 			if (len < 20) {
-				if (!S_ISDIR(entry.mode))
-					continue; /* entry cannot be subtree */
+				if (!S_ISDIR(entry.mode) || path_len != 2)
+					goto handle_non_note; /* not subtree */
 				l->key_sha1[19] = (unsigned char) len;
 				type = PTR_TYPE_SUBTREE;
 			}
-			note_tree_insert(node, n, l, type);
+			note_tree_insert(t, node, n, l, type,
+					 combine_notes_concatenate);
+		}
+		continue;
+
+handle_non_note:
+		/*
+		 * Determine full path for this non-note entry:
+		 * The filename is already found in entry.path, but the
+		 * directory part of the path must be deduced from the subtree
+		 * containing this entry. We assume here that the overall notes
+		 * tree follows a strict byte-based progressive fanout
+		 * structure (i.e. using 2/38, 2/2/36, etc. fanouts, and not
+		 * e.g. 4/36 fanout). This means that if a non-note is found at
+		 * path "dead/beef", the following code will register it as
+		 * being found on "de/ad/beef".
+		 * On the other hand, if you use such non-obvious non-note
+		 * paths in the middle of a notes tree, you deserve what's
+		 * coming to you ;). Note that for non-notes that are not
+		 * SHA1-like at the top level, there will be no problems.
+		 *
+		 * To conclude, it is strongly advised to make sure non-notes
+		 * have at least one non-hex character in the top-level path
+		 * component.
+		 */
+		{
+			char non_note_path[PATH_MAX];
+			char *p = non_note_path;
+			const char *q = sha1_to_hex(subtree->key_sha1);
+			int i;
+			for (i = 0; i < prefix_len; i++) {
+				*p++ = *q++;
+				*p++ = *q++;
+				*p++ = '/';
+			}
+			strcpy(p, entry.path);
+			add_non_note(t, non_note_path, entry.mode, entry.sha1);
 		}
 	}
 	free(buf);
 }
 
-static void initialize_notes(const char *notes_ref_name)
+/*
+ * Determine optimal on-disk fanout for this part of the notes tree
+ *
+ * Given a (sub)tree and the level in the internal tree structure, determine
+ * whether or not the given existing fanout should be expanded for this
+ * (sub)tree.
+ *
+ * Values of the 'fanout' variable:
+ * - 0: No fanout (all notes are stored directly in the root notes tree)
+ * - 1: 2/38 fanout
+ * - 2: 2/2/36 fanout
+ * - 3: 2/2/2/34 fanout
+ * etc.
+ */
+static unsigned char determine_fanout(struct int_node *tree, unsigned char n,
+		unsigned char fanout)
 {
-	unsigned char sha1[20], commit_sha1[20];
+	/*
+	 * The following is a simple heuristic that works well in practice:
+	 * For each even-numbered 16-tree level (remember that each on-disk
+	 * fanout level corresponds to _two_ 16-tree levels), peek at all 16
+	 * entries at that tree level. If all of them are either int_nodes or
+	 * subtree entries, then there are likely plenty of notes below this
+	 * level, so we return an incremented fanout.
+	 */
+	unsigned int i;
+	if ((n % 2) || (n > 2 * fanout))
+		return fanout;
+	for (i = 0; i < 16; i++) {
+		switch (GET_PTR_TYPE(tree->a[i])) {
+		case PTR_TYPE_SUBTREE:
+		case PTR_TYPE_INTERNAL:
+			continue;
+		default:
+			return fanout;
+		}
+	}
+	return fanout + 1;
+}
+
+static void construct_path_with_fanout(const unsigned char *sha1,
+		unsigned char fanout, char *path)
+{
+	unsigned int i = 0, j = 0;
+	const char *hex_sha1 = sha1_to_hex(sha1);
+	assert(fanout < 20);
+	while (fanout) {
+		path[i++] = hex_sha1[j++];
+		path[i++] = hex_sha1[j++];
+		path[i++] = '/';
+		fanout--;
+	}
+	strcpy(path + i, hex_sha1 + j);
+}
+
+static int for_each_note_helper(struct notes_tree *t, struct int_node *tree,
+		unsigned char n, unsigned char fanout, int flags,
+		each_note_fn fn, void *cb_data)
+{
+	unsigned int i;
+	void *p;
+	int ret = 0;
+	struct leaf_node *l;
+	static char path[40 + 19 + 1];  /* hex SHA1 + 19 * '/' + NUL */
+
+	fanout = determine_fanout(tree, n, fanout);
+	for (i = 0; i < 16; i++) {
+redo:
+		p = tree->a[i];
+		switch (GET_PTR_TYPE(p)) {
+		case PTR_TYPE_INTERNAL:
+			/* recurse into int_node */
+			ret = for_each_note_helper(t, CLR_PTR_TYPE(p), n + 1,
+				fanout, flags, fn, cb_data);
+			break;
+		case PTR_TYPE_SUBTREE:
+			l = (struct leaf_node *) CLR_PTR_TYPE(p);
+			/*
+			 * Subtree entries in the note tree represent parts of
+			 * the note tree that have not yet been explored. There
+			 * is a direct relationship between subtree entries at
+			 * level 'n' in the tree, and the 'fanout' variable:
+			 * Subtree entries at level 'n <= 2 * fanout' should be
+			 * preserved, since they correspond exactly to a fanout
+			 * directory in the on-disk structure. However, subtree
+			 * entries at level 'n > 2 * fanout' should NOT be
+			 * preserved, but rather consolidated into the above
+			 * notes tree level. We achieve this by unconditionally
+			 * unpacking subtree entries that exist below the
+			 * threshold level at 'n = 2 * fanout'.
+			 */
+			if (n <= 2 * fanout &&
+			    flags & FOR_EACH_NOTE_YIELD_SUBTREES) {
+				/* invoke callback with subtree */
+				unsigned int path_len =
+					l->key_sha1[19] * 2 + fanout;
+				assert(path_len < 40 + 19);
+				construct_path_with_fanout(l->key_sha1, fanout,
+							   path);
+				/* Create trailing slash, if needed */
+				if (path[path_len - 1] != '/')
+					path[path_len++] = '/';
+				path[path_len] = '\0';
+				ret = fn(l->key_sha1, l->val_sha1, path,
+					 cb_data);
+			}
+			if (n > fanout * 2 ||
+			    !(flags & FOR_EACH_NOTE_DONT_UNPACK_SUBTREES)) {
+				/* unpack subtree and resume traversal */
+				tree->a[i] = NULL;
+				load_subtree(t, l, tree, n);
+				free(l);
+				goto redo;
+			}
+			break;
+		case PTR_TYPE_NOTE:
+			l = (struct leaf_node *) CLR_PTR_TYPE(p);
+			construct_path_with_fanout(l->key_sha1, fanout, path);
+			ret = fn(l->key_sha1, l->val_sha1, path, cb_data);
+			break;
+		}
+		if (ret)
+			return ret;
+	}
+	return 0;
+}
+
+struct tree_write_stack {
+	struct tree_write_stack *next;
+	struct strbuf buf;
+	char path[2]; /* path to subtree in next, if any */
+};
+
+static inline int matches_tree_write_stack(struct tree_write_stack *tws,
+		const char *full_path)
+{
+	return  full_path[0] == tws->path[0] &&
+		full_path[1] == tws->path[1] &&
+		full_path[2] == '/';
+}
+
+static void write_tree_entry(struct strbuf *buf, unsigned int mode,
+		const char *path, unsigned int path_len, const
+		unsigned char *sha1)
+{
+	strbuf_addf(buf, "%o %.*s%c", mode, path_len, path, '\0');
+	strbuf_add(buf, sha1, 20);
+}
+
+static void tree_write_stack_init_subtree(struct tree_write_stack *tws,
+		const char *path)
+{
+	struct tree_write_stack *n;
+	assert(!tws->next);
+	assert(tws->path[0] == '\0' && tws->path[1] == '\0');
+	n = (struct tree_write_stack *)
+		xmalloc(sizeof(struct tree_write_stack));
+	n->next = NULL;
+	strbuf_init(&n->buf, 256 * (32 + 40)); /* assume 256 entries per tree */
+	n->path[0] = n->path[1] = '\0';
+	tws->next = n;
+	tws->path[0] = path[0];
+	tws->path[1] = path[1];
+}
+
+static int tree_write_stack_finish_subtree(struct tree_write_stack *tws)
+{
+	int ret;
+	struct tree_write_stack *n = tws->next;
+	unsigned char s[20];
+	if (n) {
+		ret = tree_write_stack_finish_subtree(n);
+		if (ret)
+			return ret;
+		ret = write_sha1_file(n->buf.buf, n->buf.len, tree_type, s);
+		if (ret)
+			return ret;
+		strbuf_release(&n->buf);
+		free(n);
+		tws->next = NULL;
+		write_tree_entry(&tws->buf, 040000, tws->path, 2, s);
+		tws->path[0] = tws->path[1] = '\0';
+	}
+	return 0;
+}
+
+static int write_each_note_helper(struct tree_write_stack *tws,
+		const char *path, unsigned int mode,
+		const unsigned char *sha1)
+{
+	size_t path_len = strlen(path);
+	unsigned int n = 0;
+	int ret;
+
+	/* Determine common part of tree write stack */
+	while (tws && 3 * n < path_len &&
+	       matches_tree_write_stack(tws, path + 3 * n)) {
+		n++;
+		tws = tws->next;
+	}
+
+	/* tws point to last matching tree_write_stack entry */
+	ret = tree_write_stack_finish_subtree(tws);
+	if (ret)
+		return ret;
+
+	/* Start subtrees needed to satisfy path */
+	while (3 * n + 2 < path_len && path[3 * n + 2] == '/') {
+		tree_write_stack_init_subtree(tws, path + 3 * n);
+		n++;
+		tws = tws->next;
+	}
+
+	/* There should be no more directory components in the given path */
+	assert(memchr(path + 3 * n, '/', path_len - (3 * n)) == NULL);
+
+	/* Finally add given entry to the current tree object */
+	write_tree_entry(&tws->buf, mode, path + 3 * n, path_len - (3 * n),
+			 sha1);
+
+	return 0;
+}
+
+struct write_each_note_data {
+	struct tree_write_stack *root;
+	struct non_note *next_non_note;
+};
+
+static int write_each_non_note_until(const char *note_path,
+		struct write_each_note_data *d)
+{
+	struct non_note *n = d->next_non_note;
+	int cmp, ret;
+	while (n && (!note_path || (cmp = strcmp(n->path, note_path)) <= 0)) {
+		if (note_path && cmp == 0)
+			; /* do nothing, prefer note to non-note */
+		else {
+			ret = write_each_note_helper(d->root, n->path, n->mode,
+						     n->sha1);
+			if (ret)
+				return ret;
+		}
+		n = n->next;
+	}
+	d->next_non_note = n;
+	return 0;
+}
+
+static int write_each_note(const unsigned char *object_sha1,
+		const unsigned char *note_sha1, char *note_path,
+		void *cb_data)
+{
+	struct write_each_note_data *d =
+		(struct write_each_note_data *) cb_data;
+	size_t note_path_len = strlen(note_path);
+	unsigned int mode = 0100644;
+
+	if (note_path[note_path_len - 1] == '/') {
+		/* subtree entry */
+		note_path_len--;
+		note_path[note_path_len] = '\0';
+		mode = 040000;
+	}
+	assert(note_path_len <= 40 + 19);
+
+	/* Weave non-note entries into note entries */
+	return  write_each_non_note_until(note_path, d) ||
+		write_each_note_helper(d->root, note_path, mode, note_sha1);
+}
+
+struct note_delete_list {
+	struct note_delete_list *next;
+	const unsigned char *sha1;
+};
+
+static int prune_notes_helper(const unsigned char *object_sha1,
+		const unsigned char *note_sha1, char *note_path,
+		void *cb_data)
+{
+	struct note_delete_list **l = (struct note_delete_list **) cb_data;
+	struct note_delete_list *n;
+
+	if (has_sha1_file(object_sha1))
+		return 0; /* nothing to do for this note */
+
+	/* failed to find object => prune this note */
+	n = (struct note_delete_list *) xmalloc(sizeof(*n));
+	n->next = *l;
+	n->sha1 = object_sha1;
+	*l = n;
+	return 0;
+}
+
+int combine_notes_concatenate(unsigned char *cur_sha1,
+		const unsigned char *new_sha1)
+{
+	char *cur_msg = NULL, *new_msg = NULL, *buf;
+	unsigned long cur_len, new_len, buf_len;
+	enum object_type cur_type, new_type;
+	int ret;
+
+	/* read in both note blob objects */
+	if (!is_null_sha1(new_sha1))
+		new_msg = read_sha1_file(new_sha1, &new_type, &new_len);
+	if (!new_msg || !new_len || new_type != OBJ_BLOB) {
+		free(new_msg);
+		return 0;
+	}
+	if (!is_null_sha1(cur_sha1))
+		cur_msg = read_sha1_file(cur_sha1, &cur_type, &cur_len);
+	if (!cur_msg || !cur_len || cur_type != OBJ_BLOB) {
+		free(cur_msg);
+		free(new_msg);
+		hashcpy(cur_sha1, new_sha1);
+		return 0;
+	}
+
+	/* we will separate the notes by a newline anyway */
+	if (cur_msg[cur_len - 1] == '\n')
+		cur_len--;
+
+	/* concatenate cur_msg and new_msg into buf */
+	buf_len = cur_len + 1 + new_len;
+	buf = (char *) xmalloc(buf_len);
+	memcpy(buf, cur_msg, cur_len);
+	buf[cur_len] = '\n';
+	memcpy(buf + cur_len + 1, new_msg, new_len);
+	free(cur_msg);
+	free(new_msg);
+
+	/* create a new blob object from buf */
+	ret = write_sha1_file(buf, buf_len, blob_type, cur_sha1);
+	free(buf);
+	return ret;
+}
+
+int combine_notes_overwrite(unsigned char *cur_sha1,
+		const unsigned char *new_sha1)
+{
+	hashcpy(cur_sha1, new_sha1);
+	return 0;
+}
+
+int combine_notes_ignore(unsigned char *cur_sha1,
+		const unsigned char *new_sha1)
+{
+	return 0;
+}
+
+void init_notes(struct notes_tree *t, const char *notes_ref,
+		combine_notes_fn combine_notes, int flags)
+{
+	unsigned char sha1[20], object_sha1[20];
 	unsigned mode;
 	struct leaf_node root_tree;
 
-	if (!notes_ref_name || read_ref(notes_ref_name, commit_sha1) ||
-	    get_tree_entry(commit_sha1, "", sha1, &mode))
+	if (!t)
+		t = &default_notes_tree;
+	assert(!t->initialized);
+
+	if (!notes_ref)
+		notes_ref = getenv(GIT_NOTES_REF_ENVIRONMENT);
+	if (!notes_ref)
+		notes_ref = notes_ref_name; /* value of core.notesRef config */
+	if (!notes_ref)
+		notes_ref = GIT_NOTES_DEFAULT_REF;
+
+	if (!combine_notes)
+		combine_notes = combine_notes_concatenate;
+
+	t->root = (struct int_node *) xcalloc(sizeof(struct int_node), 1);
+	t->first_non_note = NULL;
+	t->prev_non_note = NULL;
+	t->ref = notes_ref ? xstrdup(notes_ref) : NULL;
+	t->combine_notes = combine_notes;
+	t->initialized = 1;
+
+	if (flags & NOTES_INIT_EMPTY || !notes_ref ||
+	    read_ref(notes_ref, object_sha1))
 		return;
+	if (get_tree_entry(object_sha1, "", sha1, &mode))
+		die("Failed to read notes tree referenced by %s (%s)",
+		    notes_ref, object_sha1);
 
 	hashclr(root_tree.key_sha1);
 	hashcpy(root_tree.val_sha1, sha1);
-	load_subtree(&root_tree, &root_node, 0);
+	load_subtree(t, &root_tree, t->root, 0);
 }
 
-static unsigned char *lookup_notes(const unsigned char *commit_sha1)
+void add_note(struct notes_tree *t, const unsigned char *object_sha1,
+		const unsigned char *note_sha1, combine_notes_fn combine_notes)
 {
-	struct leaf_node *found = note_tree_find(&root_node, 0, commit_sha1);
-	if (found)
-		return found->val_sha1;
-	return NULL;
+	struct leaf_node *l;
+
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+	if (!combine_notes)
+		combine_notes = t->combine_notes;
+	l = (struct leaf_node *) xmalloc(sizeof(struct leaf_node));
+	hashcpy(l->key_sha1, object_sha1);
+	hashcpy(l->val_sha1, note_sha1);
+	note_tree_insert(t, t->root, 0, l, PTR_TYPE_NOTE, combine_notes);
+}
+
+void remove_note(struct notes_tree *t, const unsigned char *object_sha1)
+{
+	struct leaf_node l;
+
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+	hashcpy(l.key_sha1, object_sha1);
+	hashclr(l.val_sha1);
+	note_tree_remove(t, t->root, 0, &l);
+}
+
+const unsigned char *get_note(struct notes_tree *t,
+		const unsigned char *object_sha1)
+{
+	struct leaf_node *found;
+
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+	found = note_tree_find(t, t->root, 0, object_sha1);
+	return found ? found->val_sha1 : NULL;
 }
 
-void free_notes(void)
+int for_each_note(struct notes_tree *t, int flags, each_note_fn fn,
+		void *cb_data)
 {
-	note_tree_free(&root_node);
-	memset(&root_node, 0, sizeof(struct int_node));
-	initialized = 0;
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+	return for_each_note_helper(t, t->root, 0, 0, flags, fn, cb_data);
 }
 
-void get_commit_notes(const struct commit *commit, struct strbuf *sb,
-		const char *output_encoding, int flags)
+int write_notes_tree(struct notes_tree *t, unsigned char *result)
+{
+	struct tree_write_stack root;
+	struct write_each_note_data cb_data;
+	int ret;
+
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+
+	/* Prepare for traversal of current notes tree */
+	root.next = NULL; /* last forward entry in list is grounded */
+	strbuf_init(&root.buf, 256 * (32 + 40)); /* assume 256 entries */
+	root.path[0] = root.path[1] = '\0';
+	cb_data.root = &root;
+	cb_data.next_non_note = t->first_non_note;
+
+	/* Write tree objects representing current notes tree */
+	ret = for_each_note(t, FOR_EACH_NOTE_DONT_UNPACK_SUBTREES |
+				FOR_EACH_NOTE_YIELD_SUBTREES,
+			write_each_note, &cb_data) ||
+		write_each_non_note_until(NULL, &cb_data) ||
+		tree_write_stack_finish_subtree(&root) ||
+		write_sha1_file(root.buf.buf, root.buf.len, tree_type, result);
+	strbuf_release(&root.buf);
+	return ret;
+}
+
+void prune_notes(struct notes_tree *t)
+{
+	struct note_delete_list *l = NULL;
+
+	if (!t)
+		t = &default_notes_tree;
+	assert(t->initialized);
+
+	for_each_note(t, 0, prune_notes_helper, &l);
+
+	while (l) {
+		remove_note(t, l->sha1);
+		l = l->next;
+	}
+}
+
+void free_notes(struct notes_tree *t)
+{
+	if (!t)
+		t = &default_notes_tree;
+	if (t->root)
+		note_tree_free(t->root);
+	free(t->root);
+	while (t->first_non_note) {
+		t->prev_non_note = t->first_non_note->next;
+		free(t->first_non_note->path);
+		free(t->first_non_note);
+		t->first_non_note = t->prev_non_note;
+	}
+	free(t->ref);
+	memset(t, 0, sizeof(struct notes_tree));
+}
+
+void format_note(struct notes_tree *t, const unsigned char *object_sha1,
+		struct strbuf *sb, const char *output_encoding, int flags)
 {
 	static const char utf8[] = "utf-8";
-	unsigned char *sha1;
+	const unsigned char *sha1;
 	char *msg, *msg_p;
 	unsigned long linelen, msglen;
 	enum object_type type;
 
-	if (!initialized) {
-		const char *env = getenv(GIT_NOTES_REF_ENVIRONMENT);
-		if (env)
-			notes_ref_name = getenv(GIT_NOTES_REF_ENVIRONMENT);
-		else if (!notes_ref_name)
-			notes_ref_name = GIT_NOTES_DEFAULT_REF;
-		initialize_notes(notes_ref_name);
-		initialized = 1;
-	}
+	if (!t)
+		t = &default_notes_tree;
+	if (!t->initialized)
+		init_notes(t, NULL, NULL, 0);
 
-	sha1 = lookup_notes(commit->object.sha1);
+	sha1 = get_note(t, object_sha1);
 	if (!sha1)
 		return;
 
diff --git a/notes.h b/notes.h
index a1421e351..bad03ccab 100644
--- a/notes.h
+++ b/notes.h
@@ -1,13 +1,201 @@
 #ifndef NOTES_H
 #define NOTES_H
 
-/* Free (and de-initialize) the internal notes tree structure */
-void free_notes(void);
+/*
+ * Function type for combining two notes annotating the same object.
+ *
+ * When adding a new note annotating the same object as an existing note, it is
+ * up to the caller to decide how to combine the two notes. The decision is
+ * made by passing in a function of the following form. The function accepts
+ * two SHA1s -- of the existing note and the new note, respectively. The
+ * function then combines the notes in whatever way it sees fit, and writes the
+ * resulting SHA1 into the first SHA1 argument (cur_sha1). A non-zero return
+ * value indicates failure.
+ *
+ * The two given SHA1s must both be non-NULL and different from each other.
+ *
+ * The default combine_notes function (you get this when passing NULL) is
+ * combine_notes_concatenate(), which appends the contents of the new note to
+ * the contents of the existing note.
+ */
+typedef int combine_notes_fn(unsigned char *cur_sha1, const unsigned char *new_sha1);
 
+/* Common notes combinators */
+int combine_notes_concatenate(unsigned char *cur_sha1, const unsigned char *new_sha1);
+int combine_notes_overwrite(unsigned char *cur_sha1, const unsigned char *new_sha1);
+int combine_notes_ignore(unsigned char *cur_sha1, const unsigned char *new_sha1);
+
+/*
+ * Notes tree object
+ *
+ * Encapsulates the internal notes tree structure associated with a notes ref.
+ * Whenever a struct notes_tree pointer is required below, you may pass NULL in
+ * order to use the default/internal notes tree. E.g. you only need to pass a
+ * non-NULL value if you need to refer to several different notes trees
+ * simultaneously.
+ */
+extern struct notes_tree {
+	struct int_node *root;
+	struct non_note *first_non_note, *prev_non_note;
+	char *ref;
+	combine_notes_fn *combine_notes;
+	int initialized;
+} default_notes_tree;
+
+/*
+ * Flags controlling behaviour of notes tree initialization
+ *
+ * Default behaviour is to initialize the notes tree from the tree object
+ * specified by the given (or default) notes ref.
+ */
+#define NOTES_INIT_EMPTY 1
+
+/*
+ * Initialize the given notes_tree with the notes tree structure at the given
+ * ref. If given ref is NULL, the value of the $GIT_NOTES_REF environment
+ * variable is used, and if that is missing, the default notes ref is used
+ * ("refs/notes/commits").
+ *
+ * If you need to re-intialize a notes_tree structure (e.g. when switching from
+ * one notes ref to another), you must first de-initialize the notes_tree
+ * structure by calling free_notes(struct notes_tree *).
+ *
+ * If you pass t == NULL, the default internal notes_tree will be initialized.
+ *
+ * The combine_notes function that is passed becomes the default combine_notes
+ * function for the given notes_tree. If NULL is passed, the default
+ * combine_notes function is combine_notes_concatenate().
+ *
+ * Precondition: The notes_tree structure is zeroed (this can be achieved with
+ * memset(t, 0, sizeof(struct notes_tree)))
+ */
+void init_notes(struct notes_tree *t, const char *notes_ref,
+		combine_notes_fn combine_notes, int flags);
+
+/*
+ * Add the given note object to the given notes_tree structure
+ *
+ * IMPORTANT: The changes made by add_note() to the given notes_tree structure
+ * are not persistent until a subsequent call to write_notes_tree() returns
+ * zero.
+ */
+void add_note(struct notes_tree *t, const unsigned char *object_sha1,
+		const unsigned char *note_sha1, combine_notes_fn combine_notes);
+
+/*
+ * Remove the given note object from the given notes_tree structure
+ *
+ * IMPORTANT: The changes made by remove_note() to the given notes_tree
+ * structure are not persistent until a subsequent call to write_notes_tree()
+ * returns zero.
+ */
+void remove_note(struct notes_tree *t, const unsigned char *object_sha1);
+
+/*
+ * Get the note object SHA1 containing the note data for the given object
+ *
+ * Return NULL if the given object has no notes.
+ */
+const unsigned char *get_note(struct notes_tree *t,
+		const unsigned char *object_sha1);
+
+/*
+ * Flags controlling behaviour of for_each_note()
+ *
+ * Default behaviour of for_each_note() is to traverse every single note object
+ * in the given notes tree, unpacking subtree entries along the way.
+ * The following flags can be used to alter the default behaviour:
+ *
+ * - DONT_UNPACK_SUBTREES causes for_each_note() NOT to unpack and recurse into
+ *   subtree entries while traversing the notes tree. This causes notes within
+ *   those subtrees NOT to be passed to the callback. Use this flag if you
+ *   don't want to traverse _all_ notes, but only want to traverse the parts
+ *   of the notes tree that have already been unpacked (this includes at least
+ *   all notes that have been added/changed).
+ *
+ * - YIELD_SUBTREES causes any subtree entries that are encountered to be
+ *   passed to the callback, before recursing into them. Subtree entries are
+ *   not note objects, but represent intermediate directories in the notes
+ *   tree. When passed to the callback, subtree entries will have a trailing
+ *   slash in their path, which the callback may use to differentiate between
+ *   note entries and subtree entries. Note that already-unpacked subtree
+ *   entries are not part of the notes tree, and will therefore not be yielded.
+ *   If this flag is used together with DONT_UNPACK_SUBTREES, for_each_note()
+ *   will yield the subtree entry, but not recurse into it.
+ */
+#define FOR_EACH_NOTE_DONT_UNPACK_SUBTREES 1
+#define FOR_EACH_NOTE_YIELD_SUBTREES 2
+
+/*
+ * Invoke the specified callback function for each note in the given notes_tree
+ *
+ * If the callback returns nonzero, the note walk is aborted, and the return
+ * value from the callback is returned from for_each_note(). Hence, a zero
+ * return value from for_each_note() indicates that all notes were walked
+ * successfully.
+ *
+ * IMPORTANT: The callback function is NOT allowed to change the notes tree.
+ * In other words, the following functions can NOT be invoked (on the current
+ * notes tree) from within the callback:
+ * - add_note()
+ * - remove_note()
+ * - free_notes()
+ */
+typedef int each_note_fn(const unsigned char *object_sha1,
+		const unsigned char *note_sha1, char *note_path,
+		void *cb_data);
+int for_each_note(struct notes_tree *t, int flags, each_note_fn fn,
+		void *cb_data);
+
+/*
+ * Write the given notes_tree structure to the object database
+ *
+ * Creates a new tree object encapsulating the current state of the given
+ * notes_tree, and stores its SHA1 into the 'result' argument.
+ *
+ * Returns zero on success, non-zero on failure.
+ *
+ * IMPORTANT: Changes made to the given notes_tree are not persistent until
+ * this function has returned zero. Please also remember to create a
+ * corresponding commit object, and update the appropriate notes ref.
+ */
+int write_notes_tree(struct notes_tree *t, unsigned char *result);
+
+/*
+ * Remove all notes annotating non-existing objects from the given notes tree
+ *
+ * All notes in the given notes_tree that are associated with objects that no
+ * longer exist in the database, are removed from the notes tree.
+ *
+ * IMPORTANT: The changes made by prune_notes() to the given notes_tree
+ * structure are not persistent until a subsequent call to write_notes_tree()
+ * returns zero.
+ */
+void prune_notes(struct notes_tree *t);
+
+/*
+ * Free (and de-initialize) the given notes_tree structure
+ *
+ * IMPORTANT: Changes made to the given notes_tree since the last, successful
+ * call to write_notes_tree() will be lost.
+ */
+void free_notes(struct notes_tree *t);
+
+/* Flags controlling how notes are formatted */
 #define NOTES_SHOW_HEADER 1
 #define NOTES_INDENT 2
 
-void get_commit_notes(const struct commit *commit, struct strbuf *sb,
-		const char *output_encoding, int flags);
+/*
+ * Fill the given strbuf with the notes associated with the given object.
+ *
+ * If the given notes_tree structure is not initialized, it will be auto-
+ * initialized to the default value (see documentation for init_notes() above).
+ * If the given notes_tree is NULL, the internal/default notes_tree will be
+ * used instead.
+ *
+ * 'flags' is a bitwise combination of the above formatting flags.
+ */
+void format_note(struct notes_tree *t, const unsigned char *object_sha1,
+		struct strbuf *sb, const char *output_encoding, int flags);
 
 #endif
diff --git a/pack-write.c b/pack-write.c
index 9f47cf996..a905ca448 100644
--- a/pack-write.c
+++ b/pack-write.c
@@ -253,3 +253,30 @@ char *index_pack_lockfile(int ip_out)
 	}
 	return NULL;
 }
+
+/*
+ * The per-object header is a pretty dense thing, which is
+ *  - first byte: low four bits are "size", then three bits of "type",
+ *    and the high bit is "size continues".
+ *  - each byte afterwards: low seven bits are size continuation,
+ *    with the high bit being "size continues"
+ */
+int encode_in_pack_object_header(enum object_type type, uintmax_t size, unsigned char *hdr)
+{
+	int n = 1;
+	unsigned char c;
+
+	if (type < OBJ_COMMIT || type > OBJ_REF_DELTA)
+		die("bad type %d", type);
+
+	c = (type << 4) | (size & 15);
+	size >>= 4;
+	while (size) {
+		*hdr++ = c | 0x80;
+		c = size & 0x7f;
+		size >>= 7;
+		n++;
+	}
+	*hdr = c;
+	return n;
+}
diff --git a/pack.h b/pack.h
index b759a23d4..d268c014c 100644
--- a/pack.h
+++ b/pack.h
@@ -60,6 +60,7 @@ extern int check_pack_crc(struct packed_git *p, struct pack_window **w_curs, off
 extern int verify_pack(struct packed_git *);
 extern void fixup_pack_header_footer(int, unsigned char *, const char *, uint32_t, unsigned char *, off_t);
 extern char *index_pack_lockfile(int fd);
+extern int encode_in_pack_object_header(enum object_type, uintmax_t, unsigned char *);
 
 #define PH_ERROR_EOF		(-1)
 #define PH_ERROR_PACK_SIGNATURE	(-2)
diff --git a/pager.c b/pager.c
index 2c7e8ecb3..dac358f04 100644
--- a/pager.c
+++ b/pager.c
@@ -48,11 +48,11 @@ static void wait_for_pager_signal(int signo)
 	raise(signo);
 }
 
-const char *git_pager(void)
+const char *git_pager(int stdout_is_tty)
 {
 	const char *pager;
 
-	if (!isatty(1))
+	if (!stdout_is_tty)
 		return NULL;
 
 	pager = getenv("GIT_PAGER");
@@ -73,7 +73,7 @@ const char *git_pager(void)
 
 void setup_pager(void)
 {
-	const char *pager = git_pager();
+	const char *pager = git_pager(isatty(1));
 
 	if (!pager)
 		return;
diff --git a/parse-options.c b/parse-options.c
index d218122af..c83035d01 100644
--- a/parse-options.c
+++ b/parse-options.c
@@ -2,6 +2,7 @@
 #include "parse-options.h"
 #include "cache.h"
 #include "commit.h"
+#include "color.h"
 
 static int parse_options_usage(const char * const *usagestr,
 			       const struct option *opts);
@@ -599,6 +600,21 @@ int parse_opt_approxidate_cb(const struct option *opt, const char *arg,
 	return 0;
 }
 
+int parse_opt_color_flag_cb(const struct option *opt, const char *arg,
+			    int unset)
+{
+	int value;
+
+	if (!arg)
+		arg = unset ? "never" : (const char *)opt->defval;
+	value = git_config_colorbool(NULL, arg, -1);
+	if (value < 0)
+		return opterror(opt,
+			"expects \"always\", \"auto\", or \"never\"", 0);
+	*(int *)opt->value = value;
+	return 0;
+}
+
 int parse_opt_verbosity_cb(const struct option *opt, const char *arg,
 			   int unset)
 {
diff --git a/parse-options.h b/parse-options.h
index 0c996916b..9429f7e36 100644
--- a/parse-options.h
+++ b/parse-options.h
@@ -135,6 +135,10 @@ struct option {
 	  PARSE_OPT_NOARG | PARSE_OPT_NONEG, (f) }
 #define OPT_FILENAME(s, l, v, h)    { OPTION_FILENAME, (s), (l), (v), \
 				       "FILE", (h) }
+#define OPT_COLOR_FLAG(s, l, v, h) \
+	{ OPTION_CALLBACK, (s), (l), (v), "when", (h), PARSE_OPT_OPTARG, \
+		parse_opt_color_flag_cb, (intptr_t)"always" }
+
 
 /* parse_options() will filter out the processed options and leave the
  * non-option arguments in argv[].
@@ -187,6 +191,7 @@ extern int parse_options_end(struct parse_opt_ctx_t *ctx);
 /*----- some often used options -----*/
 extern int parse_opt_abbrev_cb(const struct option *, const char *, int);
 extern int parse_opt_approxidate_cb(const struct option *, const char *, int);
+extern int parse_opt_color_flag_cb(const struct option *, const char *, int);
 extern int parse_opt_verbosity_cb(const struct option *, const char *, int);
 extern int parse_opt_with_commit(const struct option *, const char *, int);
 extern int parse_opt_tertiary(const struct option *, const char *, int);
@@ -203,5 +208,7 @@ extern int parse_opt_tertiary(const struct option *, const char *, int);
 	{ OPTION_CALLBACK, 0, "abbrev", (var), "n", \
 	  "use <n> digits to display SHA-1s", \
 	  PARSE_OPT_OPTARG, &parse_opt_abbrev_cb, 0 }
+#define OPT__COLOR(var, h) \
+	OPT_COLOR_FLAG(0, "color", (var), (h))
 
 #endif
diff --git a/path.c b/path.c
index d1fccbde7..b4c8d9172 100644
--- a/path.c
+++ b/path.c
@@ -157,6 +157,85 @@ int git_mkstemps(char *path, size_t len, const char *template, int suffix_len)
 	return mkstemps(path, suffix_len);
 }
 
+/* Adapted from libiberty's mkstemp.c. */
+
+#undef TMP_MAX
+#define TMP_MAX 16384
+
+int git_mkstemps_mode(char *pattern, int suffix_len, int mode)
+{
+	static const char letters[] =
+		"abcdefghijklmnopqrstuvwxyz"
+		"ABCDEFGHIJKLMNOPQRSTUVWXYZ"
+		"0123456789";
+	static const int num_letters = 62;
+	uint64_t value;
+	struct timeval tv;
+	char *template;
+	size_t len;
+	int fd, count;
+
+	len = strlen(pattern);
+
+	if (len < 6 + suffix_len) {
+		errno = EINVAL;
+		return -1;
+	}
+
+	if (strncmp(&pattern[len - 6 - suffix_len], "XXXXXX", 6)) {
+		errno = EINVAL;
+		return -1;
+	}
+
+	/*
+	 * Replace pattern's XXXXXX characters with randomness.
+	 * Try TMP_MAX different filenames.
+	 */
+	gettimeofday(&tv, NULL);
+	value = ((size_t)(tv.tv_usec << 16)) ^ tv.tv_sec ^ getpid();
+	template = &pattern[len - 6 - suffix_len];
+	for (count = 0; count < TMP_MAX; ++count) {
+		uint64_t v = value;
+		/* Fill in the random bits. */
+		template[0] = letters[v % num_letters]; v /= num_letters;
+		template[1] = letters[v % num_letters]; v /= num_letters;
+		template[2] = letters[v % num_letters]; v /= num_letters;
+		template[3] = letters[v % num_letters]; v /= num_letters;
+		template[4] = letters[v % num_letters]; v /= num_letters;
+		template[5] = letters[v % num_letters]; v /= num_letters;
+
+		fd = open(pattern, O_CREAT | O_EXCL | O_RDWR, mode);
+		if (fd > 0)
+			return fd;
+		/*
+		 * Fatal error (EPERM, ENOSPC etc).
+		 * It doesn't make sense to loop.
+		 */
+		if (errno != EEXIST)
+			break;
+		/*
+		 * This is a random value.  It is only necessary that
+		 * the next TMP_MAX values generated by adding 7777 to
+		 * VALUE are different with (module 2^32).
+		 */
+		value += 7777;
+	}
+	/* We return the null string if we can't find a unique file name.  */
+	pattern[0] = '\0';
+	return -1;
+}
+
+int git_mkstemp_mode(char *pattern, int mode)
+{
+	/* mkstemp is just mkstemps with no suffix */
+	return git_mkstemps_mode(pattern, 0, mode);
+}
+
+int gitmkstemps(char *pattern, int suffix_len)
+{
+	return git_mkstemps_mode(pattern, suffix_len, 0600);
+}
+
 int validate_headref(const char *path)
 {
 	struct stat st;
@@ -649,3 +728,10 @@ int daemon_avoid_alias(const char *p)
 		}
 	}
 }
+
+int offset_1st_component(const char *path)
+{
+	if (has_dos_drive_prefix(path))
+		return 2 + is_dir_sep(path[2]);
+	return is_dir_sep(path[0]);
+}
diff --git a/perl/Git.pm b/perl/Git.pm
index 970fe434e..1926dc9a4 100644
--- a/perl/Git.pm
+++ b/perl/Git.pm
@@ -842,7 +842,7 @@ sub _open_hash_and_insert_object_if_needed {
 
 	($self->{hash_object_pid}, $self->{hash_object_in},
 	 $self->{hash_object_out}, $self->{hash_object_ctx}) =
-		command_bidi_pipe(qw(hash-object -w --stdin-paths));
+		command_bidi_pipe(qw(hash-object -w --stdin-paths --no-filters));
 }
 
 sub _close_hash_and_insert_object {
diff --git a/pretty.c b/pretty.c
index d493cade2..f999485a5 100644
--- a/pretty.c
+++ b/pretty.c
@@ -775,8 +775,9 @@ static size_t format_commit_one(struct strbuf *sb, const char *placeholder,
 		}
 		return 0;	/* unknown %g placeholder */
 	case 'N':
-		get_commit_notes(commit, sb, git_log_output_encoding ?
-			     git_log_output_encoding : git_commit_encoding, 0);
+		format_note(NULL, commit->object.sha1, sb,
+			    git_log_output_encoding ? git_log_output_encoding
+						    : git_commit_encoding, 0);
 		return 1;
 	}
 
@@ -1095,8 +1096,8 @@ void pretty_print_commit(enum cmit_fmt fmt, const struct commit *commit,
 		strbuf_addch(sb, '\n');
 
 	if (context->show_notes)
-		get_commit_notes(commit, sb, encoding,
-				 NOTES_SHOW_HEADER | NOTES_INDENT);
+		format_note(NULL, commit->object.sha1, sb, encoding,
+			    NOTES_SHOW_HEADER | NOTES_INDENT);
 
 	free(reencoded);
 }
diff --git a/refs.c b/refs.c
index f3fcbe023..63e30d74a 100644
--- a/refs.c
+++ b/refs.c
@@ -1574,7 +1574,7 @@ int for_each_recent_reflog_ent(const char *ref, each_reflog_ent_fn fn, long ofs,
 {
 	const char *logfile;
 	FILE *logfp;
-	char buf[1024];
+	struct strbuf sb = STRBUF_INIT;
 	int ret = 0;
 
 	logfile = git_path("logs/%s", ref);
@@ -1587,24 +1587,24 @@ int for_each_recent_reflog_ent(const char *ref, each_reflog_ent_fn fn, long ofs,
 		if (fstat(fileno(logfp), &statbuf) ||
 		    statbuf.st_size < ofs ||
 		    fseek(logfp, -ofs, SEEK_END) ||
-		    fgets(buf, sizeof(buf), logfp)) {
+		    strbuf_getwholeline(&sb, logfp, '\n')) {
 			fclose(logfp);
+			strbuf_release(&sb);
 			return -1;
 		}
 	}
 
-	while (fgets(buf, sizeof(buf), logfp)) {
+	while (!strbuf_getwholeline(&sb, logfp, '\n')) {
 		unsigned char osha1[20], nsha1[20];
 		char *email_end, *message;
 		unsigned long timestamp;
-		int len, tz;
+		int tz;
 
 		/* old SP new SP name <email> SP time TAB msg LF */
-		len = strlen(buf);
-		if (len < 83 || buf[len-1] != '\n' ||
-		    get_sha1_hex(buf, osha1) || buf[40] != ' ' ||
-		    get_sha1_hex(buf + 41, nsha1) || buf[81] != ' ' ||
-		    !(email_end = strchr(buf + 82, '>')) ||
+		if (sb.len < 83 || sb.buf[sb.len - 1] != '\n' ||
+		    get_sha1_hex(sb.buf, osha1) || sb.buf[40] != ' ' ||
+		    get_sha1_hex(sb.buf + 41, nsha1) || sb.buf[81] != ' ' ||
+		    !(email_end = strchr(sb.buf + 82, '>')) ||
 		    email_end[1] != ' ' ||
 		    !(timestamp = strtoul(email_end + 2, &message, 10)) ||
 		    !message || message[0] != ' ' ||
@@ -1618,11 +1618,13 @@ int for_each_recent_reflog_ent(const char *ref, each_reflog_ent_fn fn, long ofs,
 			message += 6;
 		else
 			message += 7;
-		ret = fn(osha1, nsha1, buf+82, timestamp, tz, message, cb_data);
+		ret = fn(osha1, nsha1, sb.buf + 82, timestamp, tz, message,
+			 cb_data);
 		if (ret)
 			break;
 	}
 	fclose(logfp);
+	strbuf_release(&sb);
 	return ret;
 }
 
diff --git a/remote-curl.c b/remote-curl.c
index d38812085..b76bfcb3d 100644
--- a/remote-curl.c
+++ b/remote-curl.c
@@ -10,7 +10,6 @@
 
 static struct remote *remote;
 static const char *url;
-static struct walker *walker;
 
 struct options {
 	int verbosity;
@@ -22,12 +21,6 @@ struct options {
 };
 static struct options options;
 
-static void init_walker(void)
-{
-	if (!walker)
-		walker = get_http_walker(url, remote);
-}
-
 static int set_option(const char *name, const char *value)
 {
 	if (!strcmp(name, "verbosity")) {
@@ -119,7 +112,6 @@ static struct discovery* discover_refs(const char *service)
 	}
 	refs_url = strbuf_detach(&buffer, NULL);
 
-	init_walker();
 	http_ret = http_get_strbuf(refs_url, &buffer, HTTP_NO_CACHE);
 
 	/* try again with "plain" url (no ? or & appended) */
@@ -250,9 +242,8 @@ static struct ref *parse_info_refs(struct discovery *heads)
 		i++;
 	}
 
-	init_walker();
 	ref = alloc_ref("HEAD");
-	if (!walker->fetch_ref(walker, ref) &&
+	if (!http_fetch_ref(url, ref) &&
 	    !resolve_remote_symref(ref, refs)) {
 		ref->next = refs;
 		refs = ref;
@@ -502,7 +493,6 @@ static int rpc_service(struct rpc_state *rpc, struct discovery *heads)
 	struct child_process client;
 	int err = 0;
 
-	init_walker();
 	memset(&client, 0, sizeof(client));
 	client.in = -1;
 	client.out = -1;
@@ -554,6 +544,7 @@ static int rpc_service(struct rpc_state *rpc, struct discovery *heads)
 
 static int fetch_dumb(int nr_heads, struct ref **to_fetch)
 {
+	struct walker *walker;
 	char **targets = xmalloc(nr_heads * sizeof(char*));
 	int ret, i;
 
@@ -562,13 +553,14 @@ static int fetch_dumb(int nr_heads, struct ref **to_fetch)
 	for (i = 0; i < nr_heads; i++)
 		targets[i] = xstrdup(sha1_to_hex(to_fetch[i]->old_sha1));
 
-	init_walker();
+	walker = get_http_walker(url);
 	walker->get_all = 1;
 	walker->get_tree = 1;
 	walker->get_history = 1;
 	walker->get_verbosely = options.verbosity >= 3;
 	walker->get_recover = 0;
 	ret = walker_fetch(walker, nr_heads, targets, NULL, NULL);
+	walker_free(walker);
 
 	for (i = 0; i < nr_heads; i++)
 		free(targets[i]);
@@ -811,6 +803,8 @@ int main(int argc, const char **argv)
 		url = remote->url[0];
 	}
 
+	http_init(remote);
+
 	do {
 		if (strbuf_getline(&buf, stdin, '\n') == EOF)
 			break;
@@ -856,5 +850,8 @@ int main(int argc, const char **argv)
 		}
 		strbuf_reset(&buf);
 	} while (1);
+
+	http_cleanup();
+
 	return 0;
 }
diff --git a/revision.c b/revision.c
index 3ba6d991f..490b48408 100644
--- a/revision.c
+++ b/revision.c
@@ -547,6 +547,9 @@ static void cherry_pick_list(struct commit_list *list, struct rev_info *revs)
 			right_count++;
 	}
 
+	if (!left_count || !right_count)
+		return;
+
 	left_first = left_count < right_count;
 	init_patch_ids(&ids);
 	if (revs->diffopt.nr_paths) {
@@ -823,6 +826,7 @@ void init_revisions(struct rev_info *revs, const char *prefix)
 
 	revs->grep_filter.status_only = 1;
 	revs->grep_filter.pattern_tail = &(revs->grep_filter.pattern_list);
+	revs->grep_filter.header_tail = &(revs->grep_filter.header_list);
 	revs->grep_filter.regflags = REG_NEWLINE;
 
 	diff_setup(&revs->diffopt);
@@ -1330,7 +1334,7 @@ static void append_prune_data(const char ***prune_data, const char **av)
  */
 int setup_revisions(int argc, const char **argv, struct rev_info *revs, const char *def)
 {
-	int i, flags, left, seen_dashdash, read_from_stdin;
+	int i, flags, left, seen_dashdash, read_from_stdin, got_rev_arg = 0;
 	const char **prune_data = NULL;
 
 	/* First, search for "--" */
@@ -1456,6 +1460,8 @@ int setup_revisions(int argc, const char **argv, struct rev_info *revs, const ch
 			append_prune_data(&prune_data, argv + i);
 			break;
 		}
+		else
+			got_rev_arg = 1;
 	}
 
 	if (prune_data)
@@ -1465,7 +1471,7 @@ int setup_revisions(int argc, const char **argv, struct rev_info *revs, const ch
 		revs->def = def;
 	if (revs->show_merge)
 		prepare_show_merge(revs);
-	if (revs->def && !revs->pending.nr) {
+	if (revs->def && !revs->pending.nr && !got_rev_arg) {
 		unsigned char sha1[20];
 		struct object *object;
 		unsigned mode;
@@ -1801,7 +1807,7 @@ static int rewrite_parents(struct rev_info *revs, struct commit *commit)
 
 static int commit_match(struct commit *commit, struct rev_info *opt)
 {
-	if (!opt->grep_filter.pattern_list)
+	if (!opt->grep_filter.pattern_list && !opt->grep_filter.header_list)
 		return 1;
 	return grep_buffer(&opt->grep_filter,
 			   NULL, /* we say nothing, not even filename */
diff --git a/run-command.c b/run-command.c
index 0cd7f02ff..c8d53795e 100644
--- a/run-command.c
+++ b/run-command.c
@@ -67,19 +67,21 @@ static int child_notifier = -1;
 
 static void notify_parent(void)
 {
-	write(child_notifier, "", 1);
+	ssize_t unused;
+	unused = write(child_notifier, "", 1);
 }
 
 static NORETURN void die_child(const char *err, va_list params)
 {
 	char msg[4096];
+	ssize_t unused;
 	int len = vsnprintf(msg, sizeof(msg), err, params);
 	if (len > sizeof(msg))
 		len = sizeof(msg);
 
-	write(child_err, "fatal: ", 7);
-	write(child_err, msg, len);
-	write(child_err, "\n", 1);
+	unused = write(child_err, "fatal: ", 7);
+	unused = write(child_err, msg, len);
+	unused = write(child_err, "\n", 1);
 	exit(128);
 }
 
diff --git a/send-pack.h b/send-pack.h
index 28141ac91..60b4ba66e 100644
--- a/send-pack.h
+++ b/send-pack.h
@@ -4,6 +4,7 @@
 struct send_pack_args {
 	unsigned verbose:1,
 		quiet:1,
+		porcelain:1,
 		send_mirror:1,
 		force_update:1,
 		use_thin_pack:1,
diff --git a/setup.c b/setup.c
index 0717a98d1..5716d90b5 100644
--- a/setup.c
+++ b/setup.c
@@ -18,14 +18,15 @@ const char *prefix_path(const char *prefix, int len, const char *path)
 	if (normalize_path_copy(sanitized, sanitized))
 		goto error_out;
 	if (is_absolute_path(orig)) {
-		size_t len, total;
+		size_t root_len, len, total;
 		const char *work_tree = get_git_work_tree();
 		if (!work_tree)
 			goto error_out;
 		len = strlen(work_tree);
+		root_len = offset_1st_component(work_tree);
 		total = strlen(sanitized) + 1;
 		if (strncmp(sanitized, work_tree, len) ||
-		    (sanitized[len] != '\0' && sanitized[len] != '/')) {
+		    (len > root_len && sanitized[len] != '\0' && sanitized[len] != '/')) {
 		error_out:
 			die("'%s' is outside repository", orig);
 		}
@@ -321,7 +322,7 @@ const char *setup_git_directory_gently(int *nongit_ok)
 	static char cwd[PATH_MAX+1];
 	const char *gitdirenv;
 	const char *gitfile_dir;
-	int len, offset, ceil_offset;
+	int len, offset, ceil_offset, root_len;
 
 	/*
 	 * Let's assume that we are in a git repository.
@@ -403,7 +404,8 @@ const char *setup_git_directory_gently(int *nongit_ok)
 			if (!work_tree_env)
 				inside_work_tree = 0;
 			if (offset != len) {
-				cwd[offset] = '\0';
+				root_len = offset_1st_component(cwd);
+				cwd[offset > root_len ? offset : root_len] = '\0';
 				set_git_dir(cwd);
 			} else
 				set_git_dir(".");
@@ -427,7 +429,8 @@ const char *setup_git_directory_gently(int *nongit_ok)
 	inside_git_dir = 0;
 	if (!work_tree_env)
 		inside_work_tree = 1;
-	git_work_tree_cfg = xstrndup(cwd, offset);
+	root_len = offset_1st_component(cwd);
+	git_work_tree_cfg = xstrndup(cwd, offset > root_len ? offset : root_len);
 	if (check_repository_format_gently(nongit_ok))
 		return NULL;
 	if (offset == len)
diff --git a/sha1_file.c b/sha1_file.c
index 657825e14..a08a9d088 100644
--- a/sha1_file.c
+++ b/sha1_file.c
@@ -35,13 +35,6 @@ static size_t sz_fmt(size_t s) { return s; }
 
 const unsigned char null_sha1[20];
 
-static inline int offset_1st_component(const char *path)
-{
-	if (has_dos_drive_prefix(path))
-		return 2 + (path[2] == '/');
-	return *path == '/';
-}
-
 int safe_create_leading_directories(char *path)
 {
 	char *pos = path + offset_1st_component(path);
@@ -2206,7 +2199,7 @@ int move_temp_to_file(const char *tmpfile, const char *filename)
 	}
 
 out:
-	if (set_shared_perm(filename, (S_IFREG|0444)))
+	if (adjust_shared_perm(filename))
 		return error("unable to set permission to '%s'", filename);
 	return 0;
 }
@@ -2262,7 +2255,7 @@ static int create_tmpfile(char *buffer, size_t bufsiz, const char *filename)
 	}
 	memcpy(buffer, filename, dirlen);
 	strcpy(buffer + dirlen, "tmp_obj_XXXXXX");
-	fd = mkstemp(buffer);
+	fd = git_mkstemp_mode(buffer, 0444);
 	if (fd < 0 && dirlen && errno == ENOENT) {
 		/* Make sure the directory exists */
 		memcpy(buffer, filename, dirlen);
@@ -2272,7 +2265,7 @@ static int create_tmpfile(char *buffer, size_t bufsiz, const char *filename)
 
 		/* Try again */
 		strcpy(buffer + dirlen - 1, "/tmp_obj_XXXXXX");
-		fd = mkstemp(buffer);
+		fd = git_mkstemp_mode(buffer, 0444);
 	}
 	return fd;
 }
@@ -2281,9 +2274,10 @@ static int write_loose_object(const unsigned char *sha1, char *hdr, int hdrlen,
 			      void *buf, unsigned long len, time_t mtime)
 {
 	int fd, ret;
-	size_t size;
-	unsigned char *compressed;
+	unsigned char compressed[4096];
 	z_stream stream;
+	git_SHA_CTX c;
+	unsigned char parano_sha1[20];
 	char *filename;
 	static char tmpfile[PATH_MAX];
 
@@ -2301,36 +2295,40 @@ static int write_loose_object(const unsigned char *sha1, char *hdr, int hdrlen,
 	/* Set it up */
 	memset(&stream, 0, sizeof(stream));
 	deflateInit(&stream, zlib_compression_level);
-	size = 8 + deflateBound(&stream, len+hdrlen);
-	compressed = xmalloc(size);
-
-	/* Compress it */
 	stream.next_out = compressed;
-	stream.avail_out = size;
+	stream.avail_out = sizeof(compressed);
+	git_SHA1_Init(&c);
 
 	/* First header.. */
 	stream.next_in = (unsigned char *)hdr;
 	stream.avail_in = hdrlen;
 	while (deflate(&stream, 0) == Z_OK)
 		/* nothing */;
+	git_SHA1_Update(&c, hdr, hdrlen);
 
 	/* Then the data itself.. */
 	stream.next_in = buf;
 	stream.avail_in = len;
-	ret = deflate(&stream, Z_FINISH);
+	do {
+		unsigned char *in0 = stream.next_in;
+		ret = deflate(&stream, Z_FINISH);
+		git_SHA1_Update(&c, in0, stream.next_in - in0);
+		if (write_buffer(fd, compressed, stream.next_out - compressed) < 0)
+			die("unable to write sha1 file");
+		stream.next_out = compressed;
+		stream.avail_out = sizeof(compressed);
+	} while (ret == Z_OK);
+
 	if (ret != Z_STREAM_END)
 		die("unable to deflate new object %s (%d)", sha1_to_hex(sha1), ret);
-
 	ret = deflateEnd(&stream);
 	if (ret != Z_OK)
 		die("deflateEnd on object %s failed (%d)", sha1_to_hex(sha1), ret);
+	git_SHA1_Final(parano_sha1, &c);
+	if (hashcmp(sha1, parano_sha1) != 0)
+		die("confused by unstable object source data for %s", sha1_to_hex(sha1));
 
-	size = stream.total_out;
-
-	if (write_buffer(fd, compressed, size) < 0)
-		die("unable to write sha1 file");
 	close_sha1_file(fd);
-	free(compressed);
 
 	if (mtime) {
 		struct utimbuf utb;
@@ -2434,6 +2432,8 @@ static int index_mem(unsigned char *sha1, void *buf, size_t size,
 	return ret;
 }
 
+#define SMALL_FILE_SIZE (32*1024)
+
 int index_fd(unsigned char *sha1, int fd, struct stat *st, int write_object,
 	     enum object_type type, const char *path)
 {
@@ -2448,6 +2448,14 @@ int index_fd(unsigned char *sha1, int fd, struct stat *st, int write_object,
 		else
 			ret = -1;
 		strbuf_release(&sbuf);
+	} else if (size <= SMALL_FILE_SIZE) {
+		char *buf = xmalloc(size);
+		if (size == read_in_full(fd, buf, size))
+			ret = index_mem(sha1, buf, size, write_object, type,
+					path);
+		else
+			ret = error("short read %s", strerror(errno));
+		free(buf);
 	} else if (size) {
 		void *buf = xmmap(NULL, size, PROT_READ, MAP_PRIVATE, fd, 0);
 		ret = index_mem(sha1, buf, size, write_object, type, path);
diff --git a/submodule.c b/submodule.c
index 7d70c4f7b..5d286e409 100644
--- a/submodule.c
+++ b/submodule.c
@@ -123,16 +123,19 @@ void show_submodule_summary(FILE *f, const char *path,
 
 int is_submodule_modified(const char *path)
 {
-	int len;
+	int len, i;
 	struct child_process cp;
 	const char *argv[] = {
 		"status",
 		"--porcelain",
 		NULL,
 	};
-	char *env[4];
+	const char *env[LOCAL_REPO_ENV_SIZE + 3];
 	struct strbuf buf = STRBUF_INIT;
 
+	for (i = 0; i < LOCAL_REPO_ENV_SIZE; i++)
+		env[i] = local_repo_env[i];
+
 	strbuf_addf(&buf, "%s/.git/", path);
 	if (!is_directory(buf.buf)) {
 		strbuf_release(&buf);
@@ -143,16 +146,14 @@ int is_submodule_modified(const char *path)
 	strbuf_reset(&buf);
 
 	strbuf_addf(&buf, "GIT_WORK_TREE=%s", path);
-	env[0] = strbuf_detach(&buf, NULL);
+	env[i++] = strbuf_detach(&buf, NULL);
 	strbuf_addf(&buf, "GIT_DIR=%s/.git", path);
-	env[1] = strbuf_detach(&buf, NULL);
-	strbuf_addf(&buf, "GIT_INDEX_FILE");
-	env[2] = strbuf_detach(&buf, NULL);
-	env[3] = NULL;
+	env[i++] = strbuf_detach(&buf, NULL);
+	env[i] = NULL;
 
 	memset(&cp, 0, sizeof(cp));
 	cp.argv = argv;
-	cp.env = (const char *const *)env;
+	cp.env = env;
 	cp.git_cmd = 1;
 	cp.no_stdin = 1;
 	cp.out = -1;
@@ -165,9 +166,8 @@ int is_submodule_modified(const char *path)
 	if (finish_command(&cp))
 		die("git status --porcelain failed");
 
-	free(env[0]);
-	free(env[1]);
-	free(env[2]);
+	for (i = LOCAL_REPO_ENV_SIZE; env[i]; i++)
+		free((char *)env[i]);
 	strbuf_release(&buf);
 	return len != 0;
 }
diff --git a/t/Makefile b/t/Makefile
index bd09390d3..25c559bb4 100644
--- a/t/Makefile
+++ b/t/Makefile
@@ -27,6 +27,8 @@ pre-clean:
 
 clean:
 	$(RM) -r 'trash directory'.* test-results
+	$(RM) t????/cvsroot/CVSROOT/?*
+	$(RM) -r valgrind/bin
 
 aggregate-results-and-cleanup: $(T)
 	$(MAKE) aggregate-results
diff --git a/t/lib-httpd.sh b/t/lib-httpd.sh
index 28aff887b..da4b8d5a6 100644
--- a/t/lib-httpd.sh
+++ b/t/lib-httpd.sh
@@ -131,3 +131,32 @@ stop_httpd() {
 	"$LIB_HTTPD_PATH" -d "$HTTPD_ROOT_PATH" \
 		-f "$TEST_PATH/apache.conf" $HTTPD_PARA -k stop
 }
+
+test_http_push_nonff() {
+	REMOTE_REPO=$1
+	LOCAL_REPO=$2
+	BRANCH=$3
+
+	test_expect_success 'non-fast-forward push fails' '
+		cd "$REMOTE_REPO" &&
+		HEAD=$(git rev-parse --verify HEAD) &&
+
+		cd "$LOCAL_REPO" &&
+		git checkout $BRANCH &&
+		echo "changed" > path2 &&
+		git commit -a -m path2 --amend &&
+
+		!(git push -v origin >output 2>&1) &&
+		(cd "$REMOTE_REPO" &&
+		 test $HEAD = $(git rev-parse --verify HEAD))
+	'
+
+	test_expect_success 'non-fast-forward push show ref status' '
+		grep "^ ! \[rejected\][ ]*$BRANCH -> $BRANCH (non-fast-forward)$" output
+	'
+
+	test_expect_success 'non-fast-forward push shows help message' '
+		grep "To prevent you from losing history, non-fast-forward updates were rejected" \
+			output
+	'
+}
diff --git a/t/t0001-init.sh b/t/t0001-init.sh
index 538650479..675773479 100755
--- a/t/t0001-init.sh
+++ b/t/t0001-init.sh
@@ -167,6 +167,25 @@ test_expect_success 'init with --template (blank)' '
 	! test -f template-blank/.git/info/exclude
 '
 
+test_expect_success 'init with init.templatedir set' '
+	mkdir templatedir-source &&
+	echo Content >templatedir-source/file &&
+	(
+		HOME="`pwd`" &&
+		export HOME &&
+		test_config="${HOME}/.gitconfig" &&
+		git config -f "$test_config"  init.templatedir "${HOME}/templatedir-source" &&
+		mkdir templatedir-set &&
+		cd templatedir-set &&
+		unset GIT_CONFIG_NOGLOBAL &&
+		unset GIT_TEMPLATE_DIR &&
+		NO_SET_GIT_TEMPLATE_DIR=t &&
+		export NO_SET_GIT_TEMPLATE_DIR &&
+		git init
+	) &&
+	test_cmp templatedir-source/file templatedir-set/.git/file
+'
+
 test_expect_success 'init --bare/--shared overrides system/global config' '
 	(
 		HOME="`pwd`" &&
diff --git a/t/t1007-hash-object.sh b/t/t1007-hash-object.sh
index fd98e445b..dd32432d6 100755
--- a/t/t1007-hash-object.sh
+++ b/t/t1007-hash-object.sh
@@ -65,10 +65,6 @@ test_expect_success "Can't use --path with --stdin-paths" '
 	echo example | test_must_fail git hash-object --stdin-paths --path=foo
 '
 
-test_expect_success "Can't use --stdin-paths with --no-filters" '
-	echo example | test_must_fail git hash-object --stdin-paths --no-filters
-'
-
 test_expect_success "Can't use --path with --no-filters" '
 	test_must_fail git hash-object --no-filters --path=foo
 '
@@ -141,6 +137,20 @@ test_expect_success 'check that --no-filters option works' '
 	git config --unset core.autocrlf
 '
 
+test_expect_success 'check that --no-filters option works with --stdin-paths' '
+	echo fooQ | tr Q "\\015" >file0 &&
+	cp file0 file1 &&
+	echo "file0 -crlf" >.gitattributes &&
+	echo "file1 crlf" >>.gitattributes &&
+	git config core.autocrlf true &&
+	file0_sha=$(git hash-object file0) &&
+	file1_sha=$(git hash-object file1) &&
+	test "$file0_sha" != "$file1_sha" &&
+	nofilters_file1=$(echo "file1" | git hash-object --stdin-paths --no-filters) &&
+	test "$file0_sha" = "$nofilters_file1" &&
+	git config --unset core.autocrlf
+'
+
 pop_repo
 
 for args in "-w --stdin" "--stdin -w"; do
diff --git a/t/t1304-default-acl.sh b/t/t1304-default-acl.sh
new file mode 100755
index 000000000..cc30be4a6
--- /dev/null
+++ b/t/t1304-default-acl.sh
@@ -0,0 +1,67 @@
+#!/bin/sh
+#
+# Copyright (c) 2010 Matthieu Moy
+#
+
+test_description='Test repository with default ACL'
+
+# Create the test repo with restrictive umask
+# => this must come before . ./test-lib.sh
+umask 077
+
+. ./test-lib.sh
+
+# We need an arbitrary other user give permission to using ACLs. root
+# is a good candidate: exists on all unices, and it has permission
+# anyway, so we don't create a security hole running the testsuite.
+
+if ! setfacl -m u:root:rwx .; then
+    say "Skipping ACL tests: unable to use setfacl"
+    test_done
+fi
+
+modebits () {
+	ls -l "$1" | sed -e 's|^\(..........\).*|\1|'
+}
+
+check_perms_and_acl () {
+	actual=$(modebits "$1") &&
+	case "$actual" in
+	-r--r-----*)
+		: happy
+		;;
+	*)
+		echo "Got permission '$actual', expected '-r--r-----'"
+		false
+		;;
+	esac &&
+	getfacl "$1" > actual &&
+	grep -q "user:root:rwx" actual &&
+	grep -q "user:${LOGNAME}:rwx" actual &&
+	grep -q "mask::r--" actual &&
+	grep -q "group::---" actual || false
+}
+
+dirs_to_set="./ .git/ .git/objects/ .git/objects/pack/"
+
+test_expect_success 'Setup test repo' '
+	setfacl -m u:root:rwx          $dirs_to_set &&
+	setfacl -d -m u:"$LOGNAME":rwx $dirs_to_set &&
+	setfacl -d -m u:root:rwx       $dirs_to_set &&
+
+	touch file.txt &&
+	git add file.txt &&
+	git commit -m "init"
+'
+
+test_expect_success 'Objects creation does not break ACLs with restrictive umask' '
+	# SHA1 for empty blob
+	check_perms_and_acl .git/objects/e6/9de29bb2d1d6434b8b29ae775ad8c2e48c5391
+'
+
+test_expect_success 'git gc does not break ACLs with restrictive umask' '
+	git gc &&
+	check_perms_and_acl .git/objects/pack/*.pack
+'
+
+test_done
diff --git a/t/t1410-reflog.sh b/t/t1410-reflog.sh
index 80af6b9b7..25046c420 100755
--- a/t/t1410-reflog.sh
+++ b/t/t1410-reflog.sh
@@ -214,4 +214,45 @@ test_expect_success 'delete' '
 
 '
 
+test_expect_success 'rewind2' '
+
+	test_tick && git reset --hard HEAD~2 &&
+	loglen=$(wc -l <.git/logs/refs/heads/master) &&
+	test $loglen = 4
+
+'
+
+test_expect_success '--expire=never' '
+
+	git reflog expire --verbose \
+		--expire=never \
+		--expire-unreachable=never \
+		--all &&
+	loglen=$(wc -l <.git/logs/refs/heads/master) &&
+	test $loglen = 4
+
+'
+
+test_expect_success 'gc.reflogexpire=never' '
+
+	git config gc.reflogexpire never &&
+	git config gc.reflogexpireunreachable never &&
+	git reflog expire --verbose --all &&
+	loglen=$(wc -l <.git/logs/refs/heads/master) &&
+	test $loglen = 4
+'
+
+test_expect_success 'gc.reflogexpire=false' '
+
+	git config gc.reflogexpire false &&
+	git config gc.reflogexpireunreachable false &&
+	git reflog expire --verbose --all &&
+	loglen=$(wc -l <.git/logs/refs/heads/master) &&
+	test $loglen = 4 &&
+
+	git config --unset gc.reflogexpire &&
+	git config --unset gc.reflogexpireunreachable
+
+'
+
 test_done
diff --git a/t/t1411-reflog-show.sh b/t/t1411-reflog-show.sh
index c18ed8edf..ba25ff354 100755
--- a/t/t1411-reflog-show.sh
+++ b/t/t1411-reflog-show.sh
@@ -64,4 +64,13 @@ test_expect_success 'using --date= shows reflog date (oneline)' '
 	test_cmp expect actual
 '
 
+: >expect
+test_expect_success 'empty reflog file' '
+	git branch empty &&
+	: >.git/logs/refs/heads/empty &&
+
+	git log -g empty >actual &&
+	test_cmp expect actual
+'
+
 test_done
diff --git a/t/t1509-root-worktree.sh b/t/t1509-root-worktree.sh
new file mode 100755
index 000000000..5322a3bf9
--- /dev/null
+++ b/t/t1509-root-worktree.sh
@@ -0,0 +1,249 @@
+#!/bin/sh
+
+test_description='Test Git when git repository is located at root
+
+This test requires write access in root. Do not bother if you do not
+have a throwaway chroot or VM.
+
+Script t1509/prepare-chroot.sh may help you setup chroot, then you
+can chroot in and execute this test from there.
+'
+
+. ./test-lib.sh
+
+test_cmp_val() {
+	echo "$1" > expected
+	echo "$2" > result
+	test_cmp expected result
+}
+
+test_vars() {
+	test_expect_success "$1: gitdir" '
+		test_cmp_val "'"$2"'" "$(git rev-parse --git-dir)"
+	'
+
+	test_expect_success "$1: worktree" '
+		test_cmp_val "'"$3"'" "$(git rev-parse --show-toplevel)"
+	'
+
+	test_expect_success "$1: prefix" '
+		test_cmp_val "'"$4"'" "$(git rev-parse --show-prefix)"
+	'
+}
+
+test_foobar_root() {
+	test_expect_success 'add relative' '
+		test -z "$(cd / && git ls-files)" &&
+		git add foo/foome &&
+		git add foo/bar/barme &&
+		git add me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+
+	test_expect_success 'add absolute' '
+		test -z "$(cd / && git ls-files)" &&
+		git add /foo/foome &&
+		git add /foo/bar/barme &&
+		git add /me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+
+}
+
+test_foobar_foo() {
+	test_expect_success 'add relative' '
+		test -z "$(cd / && git ls-files)" &&
+		git add foome &&
+		git add bar/barme &&
+		git add ../me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+
+	test_expect_success 'add absolute' '
+		test -z "$(cd / && git ls-files)" &&
+		git add /foo/foome &&
+		git add /foo/bar/barme &&
+		git add /me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+}
+
+test_foobar_foobar() {
+	test_expect_success 'add relative' '
+		test -z "$(cd / && git ls-files)" &&
+		git add ../foome &&
+		git add barme &&
+		git add ../../me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+
+	test_expect_success 'add absolute' '
+		test -z "$(cd / && git ls-files)" &&
+		git add /foo/foome &&
+		git add /foo/bar/barme &&
+		git add /me &&
+		( cd / && git ls-files --stage ) > result &&
+		test_cmp /ls.expected result &&
+		rm "$(git rev-parse --git-dir)/index"
+	'
+}
+
+if ! test_have_prereq POSIXPERM || ! [ -w / ]; then
+	say "Dangerous test skipped. Read this test if you want to execute it"
+	test_done
+fi
+
+if [ "$IKNOWWHATIAMDOING" != "YES" ]; then
+	say "You must set env var IKNOWWHATIAMDOING=YES in order to run this test"
+	test_done
+fi
+
+if [ "$UID" = 0 ]; then
+	say "No you can't run this with root"
+	test_done
+fi
+
+ONE_SHA1=d00491fd7e5bb6fa28c517a0bb32b8b506539d4d
+
+test_expect_success 'setup' '
+	rm -rf /foo
+	mkdir /foo &&
+	mkdir /foo/bar &&
+	echo 1 > /foo/foome &&
+	echo 1 > /foo/bar/barme &&
+	echo 1 > /me
+'
+
+say "GIT_DIR absolute, GIT_WORK_TREE set"
+
+test_expect_success 'go to /' 'cd /'
+
+cat >ls.expected <<EOF
+100644 $ONE_SHA1 0	foo/bar/barme
+100644 $ONE_SHA1 0	foo/foome
+100644 $ONE_SHA1 0	me
+EOF
+
+export GIT_DIR="$TRASH_DIRECTORY/.git"
+export GIT_WORK_TREE=/
+
+test_vars 'abs gitdir, root' "$GIT_DIR" "/" ""
+test_foobar_root
+
+test_expect_success 'go to /foo' 'cd /foo'
+
+test_vars 'abs gitdir, foo' "$GIT_DIR" "/" "foo/"
+test_foobar_foo
+
+test_expect_success 'go to /foo/bar' 'cd /foo/bar'
+
+test_vars 'abs gitdir, foo/bar' "$GIT_DIR" "/" "foo/bar/"
+test_foobar_foobar
+
+say "GIT_DIR relative, GIT_WORK_TREE set"
+
+test_expect_success 'go to /' 'cd /'
+
+export GIT_DIR="$(echo $TRASH_DIRECTORY|sed 's,^/,,')/.git"
+export GIT_WORK_TREE=/
+
+test_vars 'rel gitdir, root' "$GIT_DIR" "/" ""
+test_foobar_root
+
+test_expect_success 'go to /foo' 'cd /foo'
+
+export GIT_DIR="../$TRASH_DIRECTORY/.git"
+export GIT_WORK_TREE=/
+
+test_vars 'rel gitdir, foo' "$TRASH_DIRECTORY/.git" "/" "foo/"
+test_foobar_foo
+
+test_expect_success 'go to /foo/bar' 'cd /foo/bar'
+
+export GIT_DIR="../../$TRASH_DIRECTORY/.git"
+export GIT_WORK_TREE=/
+
+test_vars 'rel gitdir, foo/bar' "$TRASH_DIRECTORY/.git" "/" "foo/bar/"
+test_foobar_foobar
+
+say "GIT_DIR relative, GIT_WORK_TREE relative"
+
+test_expect_success 'go to /' 'cd /'
+
+export GIT_DIR="$(echo $TRASH_DIRECTORY|sed 's,^/,,')/.git"
+export GIT_WORK_TREE=.
+
+test_vars 'rel gitdir, root' "$GIT_DIR" "/" ""
+test_foobar_root
+
+test_expect_success 'go to /' 'cd /foo'
+
+export GIT_DIR="../$TRASH_DIRECTORY/.git"
+export GIT_WORK_TREE=..
+
+test_vars 'rel gitdir, foo' "$TRASH_DIRECTORY/.git" "/" "foo/"
+test_foobar_foo
+
+test_expect_success 'go to /foo/bar' 'cd /foo/bar'
+
+export GIT_DIR="../../$TRASH_DIRECTORY/.git"
+export GIT_WORK_TREE=../..
+
+test_vars 'rel gitdir, foo/bar' "$TRASH_DIRECTORY/.git" "/" "foo/bar/"
+test_foobar_foobar
+
+say ".git at root"
+
+unset GIT_DIR
+unset GIT_WORK_TREE
+
+test_expect_success 'go to /' 'cd /'
+test_expect_success 'setup' '
+	rm -rf /.git
+	echo "Initialized empty Git repository in /.git/" > expected &&
+	git init > result &&
+	test_cmp expected result
+'
+
+test_vars 'auto gitdir, root' ".git" "/" ""
+test_foobar_root
+
+test_expect_success 'go to /foo' 'cd /foo'
+test_vars 'auto gitdir, foo' "/.git" "/" "foo/"
+test_foobar_foo
+
+test_expect_success 'go to /foo/bar' 'cd /foo/bar'
+test_vars 'auto gitdir, foo/bar' "/.git" "/" "foo/bar/"
+test_foobar_foobar
+
+test_expect_success 'cleanup' 'rm -rf /.git'
+
+say "auto bare gitdir"
+
+# DESTROYYYYY!!!!!
+test_expect_success 'setup' '
+	rm -rf /refs /objects /info /hooks
+	rm /*
+	cd / &&
+	echo "Initialized empty Git repository in /" > expected &&
+	git init --bare > result &&
+	test_cmp expected result
+'
+
+test_vars 'auto gitdir, root' "." "" ""
+
+test_expect_success 'go to /foo' 'cd /foo'
+
+test_vars 'auto gitdir, root' "/" "" ""
+
+test_done
diff --git a/t/t1509/excludes b/t/t1509/excludes
new file mode 100644
index 000000000..d4d21d31a
--- /dev/null
+++ b/t/t1509/excludes
@@ -0,0 +1,14 @@
+*.o
+*~
+*.bak
+*.c
+*.h
+.git
+contrib
+Documentation
+git-gui
+gitk-git
+gitweb
+t/t4013
+t/t5100
+t/t5515
diff --git a/t/t1509/prepare-chroot.sh b/t/t1509/prepare-chroot.sh
new file mode 100755
index 000000000..c5334a8fa
--- /dev/null
+++ b/t/t1509/prepare-chroot.sh
@@ -0,0 +1,38 @@
+#!/bin/sh
+
+die() {
+	echo >&2 "$@"
+	exit 1
+}
+
+xmkdir() {
+	while [ -n "$1" ]; do
+		[ -d "$1" ] || mkdir "$1" || die "Unable to mkdir $1"
+		shift
+	done
+}
+
+R="$1"
+
+[ -n "$R" ] || die "Usage: prepare-chroot.sh <root>"
+[ -x git ] || die "This script needs to be executed at git source code's top directory"
+[ -x /bin/busybox ] || die "You need busybox"
+
+xmkdir "$R" "$R/bin" "$R/etc" "$R/lib" "$R/dev"
+[ -c "$R/dev/null" ] || die "/dev/null is missing. Do mknod $R/dev/null c 1 3 && chmod 666 $R/dev/null"
+echo "root:x:0:0:root:/:/bin/sh" > "$R/etc/passwd"
+echo "$(id -nu):x:$(id -u):$(id -g)::$(pwd)/t:/bin/sh" >> "$R/etc/passwd"
+echo "root::0:root" > "$R/etc/group"
+echo "$(id -ng)::$(id -g):$(id -nu)" >> "$R/etc/group"
+
+[ -x "$R/bin/busybox" ] || cp /bin/busybox "$R/bin/busybox"
+[ -x "$R/bin/sh" ] || ln -s /bin/busybox "$R/bin/sh"
+[ -x "$R/bin/su" ] || ln -s /bin/busybox "$R/bin/su"
+
+mkdir -p "$R$(pwd)"
+rsync --exclude-from t/t1509/excludes -Ha . "$R$(pwd)"
+ldd git | grep '/' | sed 's,.*\s\(/[^ ]*\).*,\1,' | while read i; do
+	mkdir -p "$R$(dirname $i)"
+	cp "$i" "$R/$i"
+done
+echo "Execute this in root: 'chroot $R /bin/su - $(id -nu)'"
diff --git a/t/t2016-checkout-patch.sh b/t/t2016-checkout-patch.sh
index 4d1c2e9e0..2144184d7 100755
--- a/t/t2016-checkout-patch.sh
+++ b/t/t2016-checkout-patch.sh
@@ -66,6 +66,14 @@ test_expect_success 'git checkout -p HEAD^' '
 	verify_state dir/foo parent parent
 '
 
+test_expect_success 'git checkout -p handles deletion' '
+	set_state dir/foo work index &&
+	rm dir/foo &&
+	(echo n; echo y) | git checkout -p &&
+	verify_saved_state bar &&
+	verify_state dir/foo index index
+'
+
 # The idea in the rest is that bar sorts first, so we always say 'y'
 # first and if the path limiter fails it'll apply to bar instead of
 # dir/foo.  There's always an extra 'n' to reject edits to dir/foo in
diff --git a/t/t2200-add-update.sh b/t/t2200-add-update.sh
index 912075063..2ad2819a3 100755
--- a/t/t2200-add-update.sh
+++ b/t/t2200-add-update.sh
@@ -176,4 +176,9 @@ test_expect_success 'add -u resolves unmerged paths' '
 
 '
 
+test_expect_success '"add -u non-existent" should fail' '
+	test_must_fail git add -u non-existent &&
+	! (git ls-files | grep "non-existent")
+'
+
 test_done
diff --git a/t/t3020-ls-files-error-unmatch.sh b/t/t3020-ls-files-error-unmatch.sh
index f4066cbc0..a7d818716 100755
--- a/t/t3020-ls-files-error-unmatch.sh
+++ b/t/t3020-ls-files-error-unmatch.sh
@@ -11,9 +11,11 @@ line.
 '
 . ./test-lib.sh
 
-touch foo bar
-git update-index --add foo bar
-git commit -m "add foo bar"
+test_expect_success 'setup' '
+	touch foo bar &&
+	git update-index --add foo bar &&
+	git commit -m "add foo bar"
+'
 
 test_expect_success \
     'git ls-files --error-unmatch should fail with unmatched path.' \
diff --git a/t/t3301-notes.sh b/t/t3301-notes.sh
index 714626d2d..37b96871c 100755
--- a/t/t3301-notes.sh
+++ b/t/t3301-notes.sh
@@ -13,11 +13,11 @@ echo "$MSG" > "$1"
 echo "$MSG" >& 2
 EOF
 chmod a+x fake_editor.sh
-VISUAL=./fake_editor.sh
-export VISUAL
+GIT_EDITOR=./fake_editor.sh
+export GIT_EDITOR
 
 test_expect_success 'cannot annotate non-existing HEAD' '
-	(MSG=3 && export MSG && test_must_fail git notes edit)
+	(MSG=3 && export MSG && test_must_fail git notes add)
 '
 
 test_expect_success setup '
@@ -33,18 +33,18 @@ test_expect_success setup '
 
 test_expect_success 'need valid notes ref' '
 	(MSG=1 GIT_NOTES_REF=/ && export MSG GIT_NOTES_REF &&
-	 test_must_fail git notes edit) &&
+	 test_must_fail git notes add) &&
 	(MSG=2 GIT_NOTES_REF=/ && export MSG GIT_NOTES_REF &&
 	 test_must_fail git notes show)
 '
 
-test_expect_success 'refusing to edit in refs/heads/' '
+test_expect_success 'refusing to add notes in refs/heads/' '
 	(MSG=1 GIT_NOTES_REF=refs/heads/bogus &&
 	 export MSG GIT_NOTES_REF &&
-	 test_must_fail git notes edit)
+	 test_must_fail git notes add)
 '
 
-test_expect_success 'refusing to edit in refs/remotes/' '
+test_expect_success 'refusing to edit notes in refs/remotes/' '
 	(MSG=1 GIT_NOTES_REF=refs/remotes/bogus &&
 	 export MSG GIT_NOTES_REF &&
 	 test_must_fail git notes edit)
@@ -57,8 +57,35 @@ test_expect_success 'handle empty notes gracefully' '
 
 test_expect_success 'create notes' '
 	git config core.notesRef refs/notes/commits &&
-	MSG=b1 git notes edit &&
-	test ! -f .git/new-notes &&
+	MSG=b4 git notes add &&
+	test ! -f .git/NOTES_EDITMSG &&
+	test 1 = $(git ls-tree refs/notes/commits | wc -l) &&
+	test b4 = $(git notes show) &&
+	git show HEAD^ &&
+	test_must_fail git notes show HEAD^
+'
+
+test_expect_success 'edit existing notes' '
+	MSG=b3 git notes edit &&
+	test ! -f .git/NOTES_EDITMSG &&
+	test 1 = $(git ls-tree refs/notes/commits | wc -l) &&
+	test b3 = $(git notes show) &&
+	git show HEAD^ &&
+	test_must_fail git notes show HEAD^
+'
+
+test_expect_success 'cannot add note where one exists' '
+	! MSG=b2 git notes add &&
+	test ! -f .git/NOTES_EDITMSG &&
+	test 1 = $(git ls-tree refs/notes/commits | wc -l) &&
+	test b3 = $(git notes show) &&
+	git show HEAD^ &&
+	test_must_fail git notes show HEAD^
+'
+
+test_expect_success 'can overwrite existing note with "git notes add -f"' '
+	MSG=b1 git notes add -f &&
+	test ! -f .git/NOTES_EDITMSG &&
 	test 1 = $(git ls-tree refs/notes/commits | wc -l) &&
 	test b1 = $(git notes show) &&
 	git show HEAD^ &&
@@ -81,6 +108,7 @@ test_expect_success 'show notes' '
 	git log -1 > output &&
 	test_cmp expect output
 '
+
 test_expect_success 'create multi-line notes (setup)' '
 	: > a3 &&
 	git add a3 &&
@@ -88,7 +116,7 @@ test_expect_success 'create multi-line notes (setup)' '
 	git commit -m 3rd &&
 	MSG="b3
 c3c3c3c3
-d3d3d3" git notes edit
+d3d3d3" git notes add
 '
 
 cat > expect-multiline << EOF
@@ -111,19 +139,16 @@ test_expect_success 'show multi-line notes' '
 	git log -2 > output &&
 	test_cmp expect-multiline output
 '
-test_expect_success 'create -m and -F notes (setup)' '
+test_expect_success 'create -F notes (setup)' '
 	: > a4 &&
 	git add a4 &&
 	test_tick &&
 	git commit -m 4th &&
 	echo "xyzzy" > note5 &&
-	git notes edit -m spam -F note5 -m "foo
-bar
-baz"
+	git notes add -F note5
 '
 
-whitespace="    "
-cat > expect-m-and-F << EOF
+cat > expect-F << EOF
 commit 15023535574ded8b1a89052b32673f84cf9582b8
 Author: A U Thor <author@example.com>
 Date:   Thu Apr 7 15:16:13 2005 -0700
@@ -131,21 +156,15 @@ Date:   Thu Apr 7 15:16:13 2005 -0700
     4th
 
 Notes:
-    spam
-$whitespace
     xyzzy
-$whitespace
-    foo
-    bar
-    baz
 EOF
 
-printf "\n" >> expect-m-and-F
-cat expect-multiline >> expect-m-and-F
+printf "\n" >> expect-F
+cat expect-multiline >> expect-F
 
-test_expect_success 'show -m and -F notes' '
+test_expect_success 'show -F notes' '
 	git log -3 > output &&
-	test_cmp expect-m-and-F output
+	test_cmp expect-F output
 '
 
 cat >expect << EOF
@@ -165,13 +184,7 @@ test_expect_success 'git log --pretty=raw does not show notes' '
 cat >>expect <<EOF
 
 Notes:
-    spam
-$whitespace
     xyzzy
-$whitespace
-    foo
-    bar
-    baz
 EOF
 test_expect_success 'git log --show-notes' '
 	git log -1 --pretty=raw --show-notes >output &&
@@ -180,17 +193,17 @@ test_expect_success 'git log --show-notes' '
 
 test_expect_success 'git log --no-notes' '
 	git log -1 --no-notes >output &&
-	! grep spam output
+	! grep xyzzy output
 '
 
 test_expect_success 'git format-patch does not show notes' '
 	git format-patch -1 --stdout >output &&
-	! grep spam output
+	! grep xyzzy output
 '
 
 test_expect_success 'git format-patch --show-notes does show notes' '
 	git format-patch --show-notes -1 --stdout >output &&
-	grep spam output
+	grep xyzzy output
 '
 
 for pretty in \
@@ -203,8 +216,433 @@ do
 	esac
 	test_expect_success "git show $pretty does$not show notes" '
 		git show $p >output &&
-		eval "$negate grep spam output"
+		eval "$negate grep xyzzy output"
 	'
 done
 
+test_expect_success 'create -m notes (setup)' '
+	: > a5 &&
+	git add a5 &&
+	test_tick &&
+	git commit -m 5th &&
+	git notes add -m spam -m "foo
+bar
+baz"
+'
+
+whitespace="    "
+cat > expect-m << EOF
+commit bd1753200303d0a0344be813e504253b3d98e74d
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:17:13 2005 -0700
+
+    5th
+
+Notes:
+    spam
+$whitespace
+    foo
+    bar
+    baz
+EOF
+
+printf "\n" >> expect-m
+cat expect-F >> expect-m
+
+test_expect_success 'show -m notes' '
+	git log -4 > output &&
+	test_cmp expect-m output
+'
+
+test_expect_success 'remove note with add -f -F /dev/null (setup)' '
+	git notes add -f -F /dev/null
+'
+
+cat > expect-rm-F << EOF
+commit bd1753200303d0a0344be813e504253b3d98e74d
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:17:13 2005 -0700
+
+    5th
+EOF
+
+printf "\n" >> expect-rm-F
+cat expect-F >> expect-rm-F
+
+test_expect_success 'verify note removal with -F /dev/null' '
+	git log -4 > output &&
+	test_cmp expect-rm-F output &&
+	! git notes show
+'
+
+test_expect_success 'do not create empty note with -m "" (setup)' '
+	git notes add -m ""
+'
+
+test_expect_success 'verify non-creation of note with -m ""' '
+	git log -4 > output &&
+	test_cmp expect-rm-F output &&
+	! git notes show
+'
+
+cat > expect-combine_m_and_F << EOF
+foo
+
+xyzzy
+
+bar
+
+zyxxy
+
+baz
+EOF
+
+test_expect_success 'create note with combination of -m and -F' '
+	echo "xyzzy" > note_a &&
+	echo "zyxxy" > note_b &&
+	git notes add -m "foo" -F note_a -m "bar" -F note_b -m "baz" &&
+	git notes show > output &&
+	test_cmp expect-combine_m_and_F output
+'
+
+test_expect_success 'remove note with "git notes remove" (setup)' '
+	git notes remove HEAD^ &&
+	git notes remove
+'
+
+cat > expect-rm-remove << EOF
+commit bd1753200303d0a0344be813e504253b3d98e74d
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:17:13 2005 -0700
+
+    5th
+
+commit 15023535574ded8b1a89052b32673f84cf9582b8
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:16:13 2005 -0700
+
+    4th
+EOF
+
+printf "\n" >> expect-rm-remove
+cat expect-multiline >> expect-rm-remove
+
+test_expect_success 'verify note removal with "git notes remove"' '
+	git log -4 > output &&
+	test_cmp expect-rm-remove output &&
+	! git notes show HEAD^
+'
+
+cat > expect << EOF
+c18dc024e14f08d18d14eea0d747ff692d66d6a3 1584215f1d29c65e99c6c6848626553fdd07fd75
+c9c6af7f78bc47490dbf3e822cf2f3c24d4b9061 268048bfb8a1fb38e703baceb8ab235421bf80c5
+EOF
+
+test_expect_success 'list notes with "git notes list"' '
+	git notes list > output &&
+	test_cmp expect output
+'
+
+test_expect_success 'list notes with "git notes"' '
+	git notes > output &&
+	test_cmp expect output
+'
+
+cat > expect << EOF
+c18dc024e14f08d18d14eea0d747ff692d66d6a3
+EOF
+
+test_expect_success 'list specific note with "git notes list <object>"' '
+	git notes list HEAD^^ > output &&
+	test_cmp expect output
+'
+
+cat > expect << EOF
+EOF
+
+test_expect_success 'listing non-existing notes fails' '
+	test_must_fail git notes list HEAD > output &&
+	test_cmp expect output
+'
+
+cat > expect << EOF
+Initial set of notes
+
+More notes appended with git notes append
+EOF
+
+test_expect_success 'append to existing note with "git notes append"' '
+	git notes add -m "Initial set of notes" &&
+	git notes append -m "More notes appended with git notes append" &&
+	git notes show > output &&
+	test_cmp expect output
+'
+
+test_expect_success 'appending empty string does not change existing note' '
+	git notes append -m "" &&
+	git notes show > output &&
+	test_cmp expect output
+'
+
+test_expect_success 'git notes append == add when there is no existing note' '
+	git notes remove HEAD &&
+	test_must_fail git notes list HEAD &&
+	git notes append -m "Initial set of notes
+
+More notes appended with git notes append" &&
+	git notes show > output &&
+	test_cmp expect output
+'
+
+test_expect_success 'appending empty string to non-existing note does not create note' '
+	git notes remove HEAD &&
+	test_must_fail git notes list HEAD &&
+	git notes append -m "" &&
+	test_must_fail git notes list HEAD
+'
+
+test_expect_success 'create other note on a different notes ref (setup)' '
+	: > a6 &&
+	git add a6 &&
+	test_tick &&
+	git commit -m 6th &&
+	GIT_NOTES_REF="refs/notes/other" git notes add -m "other note"
+'
+
+cat > expect-other << EOF
+commit 387a89921c73d7ed72cd94d179c1c7048ca47756
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:18:13 2005 -0700
+
+    6th
+
+Notes:
+    other note
+EOF
+
+cat > expect-not-other << EOF
+commit 387a89921c73d7ed72cd94d179c1c7048ca47756
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:18:13 2005 -0700
+
+    6th
+EOF
+
+test_expect_success 'Do not show note on other ref by default' '
+	git log -1 > output &&
+	test_cmp expect-not-other output
+'
+
+test_expect_success 'Do show note when ref is given in GIT_NOTES_REF' '
+	GIT_NOTES_REF="refs/notes/other" git log -1 > output &&
+	test_cmp expect-other output
+'
+
+test_expect_success 'Do show note when ref is given in core.notesRef config' '
+	git config core.notesRef "refs/notes/other" &&
+	git log -1 > output &&
+	test_cmp expect-other output
+'
+
+test_expect_success 'Do not show note when core.notesRef is overridden' '
+	GIT_NOTES_REF="refs/notes/wrong" git log -1 > output &&
+	test_cmp expect-not-other output
+'
+
+test_expect_success 'Allow notes on non-commits (trees, blobs, tags)' '
+	echo "Note on a tree" > expect
+	git notes add -m "Note on a tree" HEAD: &&
+	git notes show HEAD: > actual &&
+	test_cmp expect actual &&
+	echo "Note on a blob" > expect
+	filename=$(git ls-tree --name-only HEAD | head -n1) &&
+	git notes add -m "Note on a blob" HEAD:$filename &&
+	git notes show HEAD:$filename > actual &&
+	test_cmp expect actual &&
+	echo "Note on a tag" > expect
+	git tag -a -m "This is an annotated tag" foobar HEAD^ &&
+	git notes add -m "Note on a tag" foobar &&
+	git notes show foobar > actual &&
+	test_cmp expect actual
+'
+
+cat > expect << EOF
+commit 2ede89468182a62d0bde2583c736089bcf7d7e92
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:19:13 2005 -0700
+
+    7th
+
+Notes:
+    other note
+EOF
+
+test_expect_success 'create note from other note with "git notes add -C"' '
+	: > a7 &&
+	git add a7 &&
+	test_tick &&
+	git commit -m 7th &&
+	git notes add -C $(git notes list HEAD^) &&
+	git log -1 > actual &&
+	test_cmp expect actual &&
+	test "$(git notes list HEAD)" = "$(git notes list HEAD^)"
+'
+
+test_expect_success 'create note from non-existing note with "git notes add -C" fails' '
+	: > a8 &&
+	git add a8 &&
+	test_tick &&
+	git commit -m 8th &&
+	test_must_fail git notes add -C deadbeef &&
+	test_must_fail git notes list HEAD
+'
+
+cat > expect << EOF
+commit 016e982bad97eacdbda0fcbd7ce5b0ba87c81f1b
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:21:13 2005 -0700
+
+    9th
+
+Notes:
+    yet another note
+EOF
+
+test_expect_success 'create note from other note with "git notes add -c"' '
+	: > a9 &&
+	git add a9 &&
+	test_tick &&
+	git commit -m 9th &&
+	MSG="yet another note" git notes add -c $(git notes list HEAD^^) &&
+	git log -1 > actual &&
+	test_cmp expect actual
+'
+
+test_expect_success 'create note from non-existing note with "git notes add -c" fails' '
+	: > a10 &&
+	git add a10 &&
+	test_tick &&
+	git commit -m 10th &&
+	test_must_fail MSG="yet another note" git notes add -c deadbeef &&
+	test_must_fail git notes list HEAD
+'
+
+cat > expect << EOF
+commit 016e982bad97eacdbda0fcbd7ce5b0ba87c81f1b
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:21:13 2005 -0700
+
+    9th
+
+Notes:
+    yet another note
+$whitespace
+    yet another note
+EOF
+
+test_expect_success 'append to note from other note with "git notes append -C"' '
+	git notes append -C $(git notes list HEAD^) HEAD^ &&
+	git log -1 HEAD^ > actual &&
+	test_cmp expect actual
+'
+
+cat > expect << EOF
+commit ffed603236bfa3891c49644257a83598afe8ae5a
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:22:13 2005 -0700
+
+    10th
+
+Notes:
+    other note
+EOF
+
+test_expect_success 'create note from other note with "git notes append -c"' '
+	MSG="other note" git notes append -c $(git notes list HEAD^) &&
+	git log -1 > actual &&
+	test_cmp expect actual
+'
+
+cat > expect << EOF
+commit ffed603236bfa3891c49644257a83598afe8ae5a
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:22:13 2005 -0700
+
+    10th
+
+Notes:
+    other note
+$whitespace
+    yet another note
+EOF
+
+test_expect_success 'append to note from other note with "git notes append -c"' '
+	MSG="yet another note" git notes append -c $(git notes list HEAD) &&
+	git log -1 > actual &&
+	test_cmp expect actual
+'
+
+cat > expect << EOF
+commit 6352c5e33dbcab725fe0579be16aa2ba8eb369be
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:23:13 2005 -0700
+
+    11th
+
+Notes:
+    other note
+$whitespace
+    yet another note
+EOF
+
+test_expect_success 'copy note with "git notes copy"' '
+	: > a11 &&
+	git add a11 &&
+	test_tick &&
+	git commit -m 11th &&
+	git notes copy HEAD^ HEAD &&
+	git log -1 > actual &&
+	test_cmp expect actual &&
+	test "$(git notes list HEAD)" = "$(git notes list HEAD^)"
+'
+
+test_expect_success 'prevent overwrite with "git notes copy"' '
+	test_must_fail git notes copy HEAD~2 HEAD &&
+	git log -1 > actual &&
+	test_cmp expect actual &&
+	test "$(git notes list HEAD)" = "$(git notes list HEAD^)"
+'
+
+cat > expect << EOF
+commit 6352c5e33dbcab725fe0579be16aa2ba8eb369be
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:23:13 2005 -0700
+
+    11th
+
+Notes:
+    yet another note
+$whitespace
+    yet another note
+EOF
+
+test_expect_success 'allow overwrite with "git notes copy -f"' '
+	git notes copy -f HEAD~2 HEAD &&
+	git log -1 > actual &&
+	test_cmp expect actual &&
+	test "$(git notes list HEAD)" = "$(git notes list HEAD~2)"
+'
+
+test_expect_success 'cannot copy note from object without notes' '
+	: > a12 &&
+	git add a12 &&
+	test_tick &&
+	git commit -m 12th &&
+	: > a13 &&
+	git add a13 &&
+	test_tick &&
+	git commit -m 13th &&
+	test_must_fail git notes copy HEAD^ HEAD
+'
+
 test_done
diff --git a/t/t3303-notes-subtrees.sh b/t/t3303-notes-subtrees.sh
index edc4bc884..75ec18778 100755
--- a/t/t3303-notes-subtrees.sh
+++ b/t/t3303-notes-subtrees.sh
@@ -95,12 +95,12 @@ INPUT_END
 test_expect_success 'test notes in 2/38-fanout' 'test_sha1_based "s|^..|&/|"'
 test_expect_success 'verify notes in 2/38-fanout' 'verify_notes'
 
-test_expect_success 'test notes in 4/36-fanout' 'test_sha1_based "s|^....|&/|"'
-test_expect_success 'verify notes in 4/36-fanout' 'verify_notes'
-
 test_expect_success 'test notes in 2/2/36-fanout' 'test_sha1_based "s|^\(..\)\(..\)|\1/\2/|"'
 test_expect_success 'verify notes in 2/2/36-fanout' 'verify_notes'
 
+test_expect_success 'test notes in 2/2/2/34-fanout' 'test_sha1_based "s|^\(..\)\(..\)\(..\)|\1/\2/\3/|"'
+test_expect_success 'verify notes in 2/2/2/34-fanout' 'verify_notes'
+
 test_same_notes () {
 	(
 		start_note_commit &&
@@ -128,14 +128,17 @@ INPUT_END
 	git fast-import --quiet
 }
 
-test_expect_success 'test same notes in 4/36-fanout and 2/38-fanout' 'test_same_notes "s|^..|&/|" "s|^....|&/|"'
-test_expect_success 'verify same notes in 4/36-fanout and 2/38-fanout' 'verify_notes'
+test_expect_success 'test same notes in no fanout and 2/38-fanout' 'test_same_notes "s|^..|&/|" ""'
+test_expect_success 'verify same notes in no fanout and 2/38-fanout' 'verify_notes'
+
+test_expect_success 'test same notes in no fanout and 2/2/36-fanout' 'test_same_notes "s|^\(..\)\(..\)|\1/\2/|" ""'
+test_expect_success 'verify same notes in no fanout and 2/2/36-fanout' 'verify_notes'
 
 test_expect_success 'test same notes in 2/38-fanout and 2/2/36-fanout' 'test_same_notes "s|^\(..\)\(..\)|\1/\2/|" "s|^..|&/|"'
 test_expect_success 'verify same notes in 2/38-fanout and 2/2/36-fanout' 'verify_notes'
 
-test_expect_success 'test same notes in 4/36-fanout and 2/2/36-fanout' 'test_same_notes "s|^\(..\)\(..\)|\1/\2/|" "s|^....|&/|"'
-test_expect_success 'verify same notes in 4/36-fanout and 2/2/36-fanout' 'verify_notes'
+test_expect_success 'test same notes in 2/2/2/34-fanout and 2/2/36-fanout' 'test_same_notes "s|^\(..\)\(..\)|\1/\2/|" "s|^\(..\)\(..\)\(..\)|\1/\2/\3/|"'
+test_expect_success 'verify same notes in 2/2/2/34-fanout and 2/2/36-fanout' 'verify_notes'
 
 test_concatenated_notes () {
 	(
@@ -176,13 +179,16 @@ verify_concatenated_notes () {
     test_cmp expect output
 }
 
-test_expect_success 'test notes in 4/36-fanout concatenated with 2/38-fanout' 'test_concatenated_notes "s|^..|&/|" "s|^....|&/|"'
-test_expect_success 'verify notes in 4/36-fanout concatenated with 2/38-fanout' 'verify_concatenated_notes'
+test_expect_success 'test notes in no fanout concatenated with 2/38-fanout' 'test_concatenated_notes "s|^..|&/|" ""'
+test_expect_success 'verify notes in no fanout concatenated with 2/38-fanout' 'verify_concatenated_notes'
+
+test_expect_success 'test notes in no fanout concatenated with 2/2/36-fanout' 'test_concatenated_notes "s|^\(..\)\(..\)|\1/\2/|" ""'
+test_expect_success 'verify notes in no fanout concatenated with 2/2/36-fanout' 'verify_concatenated_notes'
 
 test_expect_success 'test notes in 2/38-fanout concatenated with 2/2/36-fanout' 'test_concatenated_notes "s|^\(..\)\(..\)|\1/\2/|" "s|^..|&/|"'
 test_expect_success 'verify notes in 2/38-fanout concatenated with 2/2/36-fanout' 'verify_concatenated_notes'
 
-test_expect_success 'test notes in 4/36-fanout concatenated with 2/2/36-fanout' 'test_concatenated_notes "s|^\(..\)\(..\)|\1/\2/|" "s|^....|&/|"'
-test_expect_success 'verify notes in 4/36-fanout concatenated with 2/2/36-fanout' 'verify_concatenated_notes'
+test_expect_success 'test notes in 2/2/36-fanout concatenated with 2/2/2/34-fanout' 'test_concatenated_notes "s|^\(..\)\(..\)\(..\)|\1/\2/\3/|" "s|^\(..\)\(..\)|\1/\2/|"'
+test_expect_success 'verify notes in 2/2/36-fanout concatenated with 2/2/2/34-fanout' 'verify_concatenated_notes'
 
 test_done
diff --git a/t/t3304-notes-mixed.sh b/t/t3304-notes-mixed.sh
index 256687ffb..1709e8c00 100755
--- a/t/t3304-notes-mixed.sh
+++ b/t/t3304-notes-mixed.sh
@@ -131,6 +131,17 @@ data <<EOF
 another non-note with SHA1-like name
 EOF
 
+M 644 inline de/adbeefdeadbeefdeadbeefdeadbeefdeadbeef
+data <<EOF
+This is actually a valid note, albeit to a non-existing object.
+It is needed in order to trigger the "mishandling" of the dead/beef non-note.
+EOF
+
+M 644 inline dead/beef
+data <<EOF
+yet another non-note with SHA1-like name
+EOF
+
 INPUT_END
 	git fast-import --quiet <input &&
 	git config core.notesRef refs/notes/commits
@@ -158,6 +169,9 @@ EXPECT_END
 cat >expect_nn3 <<EXPECT_END
 another non-note with SHA1-like name
 EXPECT_END
+cat >expect_nn4 <<EXPECT_END
+yet another non-note with SHA1-like name
+EXPECT_END
 
 test_expect_success "verify contents of non-notes" '
 
@@ -166,7 +180,27 @@ test_expect_success "verify contents of non-notes" '
 	git cat-file -p refs/notes/commits:deadbeef > actual_nn2 &&
 	test_cmp expect_nn2 actual_nn2 &&
 	git cat-file -p refs/notes/commits:de/adbeef > actual_nn3 &&
-	test_cmp expect_nn3 actual_nn3
+	test_cmp expect_nn3 actual_nn3 &&
+	git cat-file -p refs/notes/commits:dead/beef > actual_nn4 &&
+	test_cmp expect_nn4 actual_nn4
+'
+
+test_expect_success "git-notes preserves non-notes" '
+
+	test_tick &&
+	git notes add -f -m "foo bar"
+'
+
+test_expect_success "verify contents of non-notes after git-notes" '
+
+	git cat-file -p refs/notes/commits:foobar/non-note.txt > actual_nn1 &&
+	test_cmp expect_nn1 actual_nn1 &&
+	git cat-file -p refs/notes/commits:deadbeef > actual_nn2 &&
+	test_cmp expect_nn2 actual_nn2 &&
+	git cat-file -p refs/notes/commits:de/adbeef > actual_nn3 &&
+	test_cmp expect_nn3 actual_nn3 &&
+	git cat-file -p refs/notes/commits:dead/beef > actual_nn4 &&
+	test_cmp expect_nn4 actual_nn4
 '
 
 test_done
diff --git a/t/t3305-notes-fanout.sh b/t/t3305-notes-fanout.sh
new file mode 100755
index 000000000..b1ea64b21
--- /dev/null
+++ b/t/t3305-notes-fanout.sh
@@ -0,0 +1,95 @@
+#!/bin/sh
+
+test_description='Test that adding/removing many notes triggers automatic fanout restructuring'
+
+. ./test-lib.sh
+
+test_expect_success 'creating many notes with git-notes' '
+	num_notes=300 &&
+	i=0 &&
+	while test $i -lt $num_notes
+	do
+		i=$(($i + 1)) &&
+		test_tick &&
+		echo "file for commit #$i" > file &&
+		git add file &&
+		git commit -q -m "commit #$i" &&
+		git notes add -m "note #$i" || return 1
+	done
+'
+
+test_expect_success 'many notes created correctly with git-notes' '
+	git log | grep "^    " > output &&
+	i=300 &&
+	while test $i -gt 0
+	do
+		echo "    commit #$i" &&
+		echo "    note #$i" &&
+		i=$(($i - 1));
+	done > expect &&
+	test_cmp expect output
+'
+
+test_expect_success 'many notes created with git-notes triggers fanout' '
+	# Expect entire notes tree to have a fanout == 1
+	git ls-tree -r --name-only refs/notes/commits |
+	while read path
+	do
+		case "$path" in
+		??/??????????????????????????????????????)
+			: true
+			;;
+		*)
+			echo "Invalid path \"$path\"" &&
+			return 1
+			;;
+		esac
+	done
+'
+
+test_expect_success 'deleting most notes with git-notes' '
+	num_notes=250 &&
+	i=0 &&
+	git rev-list HEAD |
+	while read sha1
+	do
+		i=$(($i + 1)) &&
+		if test $i -gt $num_notes
+		then
+			break
+		fi &&
+		test_tick &&
+		git notes remove "$sha1"
+	done
+'
+
+test_expect_success 'most notes deleted correctly with git-notes' '
+	git log HEAD~250 | grep "^    " > output &&
+	i=50 &&
+	while test $i -gt 0
+	do
+		echo "    commit #$i" &&
+		echo "    note #$i" &&
+		i=$(($i - 1));
+	done > expect &&
+	test_cmp expect output
+'
+
+test_expect_success 'deleting most notes triggers fanout consolidation' '
+	# Expect entire notes tree to have a fanout == 0
+	git ls-tree -r --name-only refs/notes/commits |
+	while read path
+	do
+		case "$path" in
+		????????????????????????????????????????)
+			: true
+			;;
+		*)
+			echo "Invalid path \"$path\"" &&
+			return 1
+			;;
+		esac
+	done
+'
+
+test_done
diff --git a/t/t3306-notes-prune.sh b/t/t3306-notes-prune.sh
new file mode 100755
index 000000000..a0ed0353e
--- /dev/null
+++ b/t/t3306-notes-prune.sh
@@ -0,0 +1,94 @@
+#!/bin/sh
+
+test_description='Test git notes prune'
+
+. ./test-lib.sh
+
+test_expect_success 'setup: create a few commits with notes' '
+
+	: > file1 &&
+	git add file1 &&
+	test_tick &&
+	git commit -m 1st &&
+	git notes add -m "Note #1" &&
+	: > file2 &&
+	git add file2 &&
+	test_tick &&
+	git commit -m 2nd &&
+	git notes add -m "Note #2" &&
+	: > file3 &&
+	git add file3 &&
+	test_tick &&
+	git commit -m 3rd &&
+	git notes add -m "Note #3"
+'
+
+cat > expect <<END_OF_LOG
+commit 5ee1c35e83ea47cd3cc4f8cbee0568915fbbbd29
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:15:13 2005 -0700
+
+    3rd
+
+Notes:
+    Note #3
+
+commit 08341ad9e94faa089d60fd3f523affb25c6da189
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:14:13 2005 -0700
+
+    2nd
+
+Notes:
+    Note #2
+
+commit ab5f302035f2e7aaf04265f08b42034c23256e1f
+Author: A U Thor <author@example.com>
+Date:   Thu Apr 7 15:13:13 2005 -0700
+
+    1st
+
+Notes:
+    Note #1
+END_OF_LOG
+
+test_expect_success 'verify commits and notes' '
+
+	git log > actual &&
+	test_cmp expect actual
+'
+
+test_expect_success 'remove some commits' '
+
+	git reset --hard HEAD~2 &&
+	git reflog expire --expire=now HEAD &&
+	git gc --prune=now
+'
+
+test_expect_success 'verify that commits are gone' '
+
+	! git cat-file -p 5ee1c35e83ea47cd3cc4f8cbee0568915fbbbd29 &&
+	! git cat-file -p 08341ad9e94faa089d60fd3f523affb25c6da189 &&
+	git cat-file -p ab5f302035f2e7aaf04265f08b42034c23256e1f
+'
+
+test_expect_success 'verify that notes are still present' '
+
+	git notes show 5ee1c35e83ea47cd3cc4f8cbee0568915fbbbd29 &&
+	git notes show 08341ad9e94faa089d60fd3f523affb25c6da189 &&
+	git notes show ab5f302035f2e7aaf04265f08b42034c23256e1f
+'
+
+test_expect_success 'prune notes' '
+
+	git notes prune
+'
+
+test_expect_success 'verify that notes are gone' '
+
+	! git notes show 5ee1c35e83ea47cd3cc4f8cbee0568915fbbbd29 &&
+	! git notes show 08341ad9e94faa089d60fd3f523affb25c6da189 &&
+	git notes show ab5f302035f2e7aaf04265f08b42034c23256e1f
+'
+
+test_done
diff --git a/t/t3417-rebase-whitespace-fix.sh b/t/t3417-rebase-whitespace-fix.sh
new file mode 100755
index 000000000..220a740ee
--- /dev/null
+++ b/t/t3417-rebase-whitespace-fix.sh
@@ -0,0 +1,126 @@
+#!/bin/sh
+
+test_description='git rebase --whitespace=fix
+
+This test runs git rebase --whitespace=fix and make sure that it works.
+'
+
+. ./test-lib.sh
+
+# prepare initial revision of "file" with a blank line at the end
+cat >file <<EOF
+a
+b
+c
+
+EOF
+
+# expected contents in "file" after rebase
+cat >expect-first <<EOF
+a
+b
+c
+EOF
+
+# prepare second revision of "file"
+cat >second <<EOF
+a
+b
+c
+
+d
+e
+f
+
+
+
+
+EOF
+
+# expected contents in second revision after rebase
+cat >expect-second <<EOF
+a
+b
+c
+
+d
+e
+f
+EOF
+
+test_expect_success 'blank line at end of file; extend at end of file' '
+	git commit --allow-empty -m "Initial empty commit" &&
+	git add file && git commit -m first &&
+	mv second file &&
+	git add file &&	git commit -m second &&
+	git rebase --whitespace=fix HEAD^^ &&
+	git diff --exit-code HEAD^:file expect-first &&
+	test_cmp file expect-second
+'
+
+# prepare third revision of "file"
+sed -e's/Z//' >third <<EOF
+a
+b
+c
+
+d
+e
+f
+    Z
+ Z
+h
+i
+j
+k
+l
+EOF
+
+sed -e's/ //g' <third >expect-third
+
+test_expect_success 'two blanks line at end of file; extend at end of file' '
+	cp third file && git add file && git commit -m third &&
+	git rebase --whitespace=fix HEAD^^ &&
+	git diff --exit-code HEAD^:file expect-second &&
+	test_cmp file expect-third
+'
+
+test_expect_success 'same, but do not remove trailing spaces' '
+	git config core.whitespace "-blank-at-eol" &&
+	git reset --hard HEAD^ &&
+	cp third file && git add file && git commit -m third &&
+	git rebase --whitespace=fix HEAD^^
+	git diff --exit-code HEAD^:file expect-second &&
+	test_cmp file third
+'
+
+sed -e's/Z//' >beginning <<EOF
+a
+		    Z
+       Z
+EOF
+
+cat >expect-beginning <<EOF
+a
+
+
+1
+2
+3
+4
+5
+EOF
+
+test_expect_success 'at beginning of file' '
+	git config core.whitespace "blank-at-eol" &&
+	cp beginning file &&
+	git commit -m beginning file &&
+	for i in 1 2 3 4 5; do
+		echo $i
+	done >> file &&
+	git commit -m more file	&&
+	git rebase --whitespace=fix HEAD^^ &&
+	test_cmp file expect-beginning
+'
+
+test_done
diff --git a/t/t3700-add.sh b/t/t3700-add.sh
index 85eb0fbf9..525c9a8fd 100755
--- a/t/t3700-add.sh
+++ b/t/t3700-add.sh
@@ -255,4 +255,9 @@ test_expect_success 'git add to resolve conflicts on otherwise ignored path' '
 	git add track-this
 '
 
+test_expect_success '"add non-existent" should fail' '
+	test_must_fail git add non-existent &&
+	! (git ls-files | grep "non-existent")
+'
+
 test_done
diff --git a/t/t3800-mktag.sh b/t/t3800-mktag.sh
index 6fb027ba5..8eb47942e 100755
--- a/t/t3800-mktag.sh
+++ b/t/t3800-mktag.sh
@@ -22,10 +22,12 @@ check_verify_failure () {
 ###########################################################
 # first create a commit, so we have a valid object/type
 # for the tag.
-echo Hello >A
-git update-index --add A
-git commit -m "Initial commit"
-head=$(git rev-parse --verify HEAD)
+test_expect_success 'setup' '
+	echo Hello >A &&
+	git update-index --add A &&
+	git commit -m "Initial commit" &&
+	head=$(git rev-parse --verify HEAD)
+'
 
 ############################################################
 #  1. length check
diff --git a/t/t4014-format-patch.sh b/t/t4014-format-patch.sh
index f2a2aaa2b..c7b625642 100755
--- a/t/t4014-format-patch.sh
+++ b/t/t4014-format-patch.sh
@@ -143,6 +143,58 @@ test_expect_success 'configuration headers and command line headers' '
 	grep "^ *S. E. Cipient <scipient@example.com>\$" patch7
 '
 
+test_expect_success 'command line To: header' '
+
+	git config --unset-all format.headers &&
+	git format-patch --to="R. E. Cipient <rcipient@example.com>" --stdout master..side | sed -e "/^\$/q" >patch8 &&
+	grep "^To: R. E. Cipient <rcipient@example.com>\$" patch8
+'
+
+test_expect_success 'configuration To: header' '
+
+	git config format.to "R. E. Cipient <rcipient@example.com>" &&
+	git format-patch --stdout master..side | sed -e "/^\$/q" >patch9 &&
+	grep "^To: R. E. Cipient <rcipient@example.com>\$" patch9
+'
+
+test_expect_success '--no-to overrides config.to' '
+
+	git config --replace-all format.to \
+		"R. E. Cipient <rcipient@example.com>" &&
+	git format-patch --no-to --stdout master..side |
+	sed -e "/^\$/q" >patch10 &&
+	! grep "^To: R. E. Cipient <rcipient@example.com>\$" patch10
+'
+
+test_expect_success '--no-to and --to replaces config.to' '
+
+	git config --replace-all format.to \
+		"Someone <someone@out.there>" &&
+	git format-patch --no-to --to="Someone Else <else@out.there>" \
+		--stdout master..side |
+	sed -e "/^\$/q" >patch11 &&
+	! grep "^To: Someone <someone@out.there>\$" patch11 &&
+	grep "^To: Someone Else <else@out.there>\$" patch11
+'
+
+test_expect_success '--no-cc overrides config.cc' '
+
+	git config --replace-all format.cc \
+		"C. E. Cipient <rcipient@example.com>" &&
+	git format-patch --no-cc --stdout master..side |
+	sed -e "/^\$/q" >patch12 &&
+	! grep "^Cc: C. E. Cipient <rcipient@example.com>\$" patch12
+'
+
+test_expect_success '--no-add-headers overrides config.headers' '
+
+	git config --replace-all format.headers \
+		"Header1: B. E. Cipient <rcipient@example.com>" &&
+	git format-patch --no-add-headers --stdout master..side |
+	sed -e "/^\$/q" >patch13 &&
+	! grep "^Header1: B. E. Cipient <rcipient@example.com>\$" patch13
+'
+
 test_expect_success 'multiple files' '
 
 	rm -rf patches/ &&
diff --git a/t/t4017-diff-retval.sh b/t/t4017-diff-retval.sh
index 60dd2014d..0391a5827 100755
--- a/t/t4017-diff-retval.sh
+++ b/t/t4017-diff-retval.sh
@@ -5,6 +5,9 @@ test_description='Return value of diffs'
 . ./test-lib.sh
 
 test_expect_success 'setup' '
+	echo "1 " >a &&
+	git add . &&
+	git commit -m zeroth &&
 	echo 1 >a &&
 	git add . &&
 	git commit -m first &&
@@ -13,6 +16,18 @@ test_expect_success 'setup' '
 	git commit -a -m second
 '
 
+test_expect_success 'git diff --quiet -w  HEAD^^ HEAD^' '
+	git diff --quiet -w HEAD^^ HEAD^
+'
+
+test_expect_success 'git diff --quiet HEAD^^ HEAD^' '
+	test_must_fail git diff --quiet HEAD^^ HEAD^
+'
+
+test_expect_success 'git diff --quiet -w  HEAD^ HEAD' '
+	test_must_fail git diff --quiet -w HEAD^ HEAD
+'
+
 test_expect_success 'git diff-tree HEAD^ HEAD' '
 	git diff-tree --exit-code HEAD^ HEAD
 	test $? = 1
diff --git a/t/t4026-color.sh b/t/t4026-color.sh
index 5ade44c04..d5ccdd0cf 100755
--- a/t/t4026-color.sh
+++ b/t/t4026-color.sh
@@ -8,14 +8,13 @@ test_description='Test diff/status color escape codes'
 
 color()
 {
-	git config diff.color.new "$1" &&
-	test "`git config --get-color diff.color.new`" = "$2"
+	actual=$(git config --get-color no.such.slot "$1") &&
+	test "$actual" = "$2"
 }
 
 invalid_color()
 {
-	git config diff.color.new "$1" &&
-	test -z "`git config --get-color diff.color.new 2>/dev/null`"
+	test_must_fail git config --get-color no.such.slot "$1"
 }
 
 test_expect_success 'reset' '
@@ -42,6 +41,14 @@ test_expect_success 'fg bg attr' '
 	color "blue red ul" "[4;34;41m"
 '
 
+test_expect_success 'fg bg attr...' '
+	color "blue bold dim ul blink reverse" "[1;2;4;5;7;34m"
+'
+
+test_expect_success 'long color specification' '
+	color "254 255 bold dim ul blink reverse" "[1;2;4;5;7;38;5;254;48;5;255m"
+'
+
 test_expect_success '256 colors' '
 	color "254 bold 255" "[1;38;5;254;48;5;255m"
 '
diff --git a/t/t4103-apply-binary.sh b/t/t4103-apply-binary.sh
index ad4cc1a75..9692f16f3 100755
--- a/t/t4103-apply-binary.sh
+++ b/t/t4103-apply-binary.sh
@@ -20,23 +20,25 @@ EOF
 cat file1 >file2
 cat file1 >file4
 
-git update-index --add --remove file1 file2 file4
-git commit -m 'Initial Version' 2>/dev/null
-
-git checkout -b binary
-perl -pe 'y/x/\000/' <file1 >file3
-cat file3 >file4
-git add file2
-perl -pe 'y/\000/v/' <file3 >file1
-rm -f file2
-git update-index --add --remove file1 file2 file3 file4
-git commit -m 'Second Version'
-
-git diff-tree -p master binary >B.diff
-git diff-tree -p -C master binary >C.diff
-
-git diff-tree -p --binary master binary >BF.diff
-git diff-tree -p --binary -C master binary >CF.diff
+test_expect_success 'setup' "
+	git update-index --add --remove file1 file2 file4 &&
+	git commit -m 'Initial Version' 2>/dev/null &&
+
+	git checkout -b binary &&
+	perl -pe 'y/x/\000/' <file1 >file3 &&
+	cat file3 >file4 &&
+	git add file2 &&
+	perl -pe 'y/\000/v/' <file3 >file1 &&
+	rm -f file2 &&
+	git update-index --add --remove file1 file2 file3 file4 &&
+	git commit -m 'Second Version' &&
+
+	git diff-tree -p master binary >B.diff &&
+	git diff-tree -p -C master binary >C.diff &&
+
+	git diff-tree -p --binary master binary >BF.diff &&
+	git diff-tree -p --binary -C master binary >CF.diff
+"
 
 test_expect_success 'stat binary diff -- should not fail.' \
 	'git checkout master
diff --git a/t/t4104-apply-boundary.sh b/t/t4104-apply-boundary.sh
index 0e3ce3611..c617c2a33 100755
--- a/t/t4104-apply-boundary.sh
+++ b/t/t4104-apply-boundary.sh
@@ -134,4 +134,13 @@ test_expect_success 'two lines' '
 
 '
 
+test_expect_success 'apply patch with 3 context lines matching at end' '
+	{ echo a; echo b; echo c; echo d; } >file &&
+	git add file &&
+	echo e >>file &&
+	git diff >patch &&
+	>file &&
+	test_must_fail git apply patch
+'
+
 test_done
diff --git a/t/t4124-apply-ws-rule.sh b/t/t4124-apply-ws-rule.sh
index ca2639759..fb9ad247b 100755
--- a/t/t4124-apply-ws-rule.sh
+++ b/t/t4124-apply-ws-rule.sh
@@ -261,4 +261,174 @@ test_expect_success 'blank but not empty at EOF' '
 	grep "new blank line at EOF" error
 '
 
+test_expect_success 'applying beyond EOF requires one non-blank context line' '
+	{ echo; echo; echo; echo; } >one &&
+	git add one &&
+	{ echo b; } >>one &&
+	git diff -- one >patch &&
+
+	git checkout one &&
+	{ echo a; echo; } >one &&
+	cp one expect &&
+	test_must_fail git apply --whitespace=fix patch &&
+	test_cmp one expect &&
+	test_must_fail git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'tons of blanks at EOF should not apply' '
+	for i in 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16; do
+		echo; echo; echo; echo;
+	done >one &&
+	git add one &&
+	echo a >>one &&
+	git diff -- one >patch &&
+
+	>one &&
+	test_must_fail git apply --whitespace=fix patch &&
+	test_must_fail git apply --ignore-space-change --whitespace=fix patch
+'
+
+test_expect_success 'missing blank line at end with --whitespace=fix' '
+	echo a >one &&
+	echo >>one &&
+	git add one &&
+	echo b >>one &&
+	cp one expect &&
+	git diff -- one >patch &&
+	echo a >one &&
+	cp one saved-one &&
+	test_must_fail git apply patch &&
+	git apply --whitespace=fix patch &&
+	test_cmp one expect &&
+	mv saved-one one &&
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'two missing blank lines at end with --whitespace=fix' '
+	{ echo a; echo; echo b; echo c; } >one &&
+	cp one no-blank-lines &&
+	{ echo; echo; } >>one &&
+	git add one &&
+	echo d >>one &&
+	cp one expect &&
+	echo >>one &&
+	git diff -- one >patch &&
+	cp no-blank-lines one &&
+	test_must_fail git apply patch &&
+	git apply --whitespace=fix patch &&
+	test_cmp one expect &&
+	mv no-blank-lines one &&
+	test_must_fail git apply patch &&
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'shrink file with tons of missing blanks at end of file' '
+	{ echo a; echo b; echo c; } >one &&
+	cp one no-blank-lines &&
+	for i in 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16; do
+		echo; echo; echo; echo;
+	done >>one &&
+	git add one &&
+	echo a >one &&
+	cp one expect &&
+	git diff -- one >patch &&
+	cp no-blank-lines one &&
+	test_must_fail git apply patch &&
+	git apply --whitespace=fix patch &&
+	test_cmp one expect &&
+	mv no-blank-lines one &&
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'missing blanks at EOF must only match blank lines' '
+	{ echo a; echo b; } >one &&
+	git add one &&
+	{ echo c; echo d; } >>one &&
+	git diff -- one >patch &&
+
+	echo a >one &&
+	test_must_fail git apply patch
+	test_must_fail git apply --whitespace=fix patch &&
+	test_must_fail git apply --ignore-space-change --whitespace=fix patch
+'
+
+sed -e's/Z//' >one <<EOF
+a
+b
+c
+		      Z
+EOF
+
+test_expect_success 'missing blank line should match context line with spaces' '
+	git add one &&
+	echo d >>one &&
+	git diff -- one >patch &&
+	{ echo a; echo b; echo c; } >one &&
+	cp one expect &&
+	{ echo; echo d; } >>expect &&
+	git add one &&
+
+	git apply --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+sed -e's/Z//' >one <<EOF
+a
+b
+c
+		      Z
+EOF
+
+test_expect_success 'same, but with the --ignore-space-option' '
+	git add one &&
+	echo d >>one &&
+	cp one expect &&
+	git diff -- one >patch &&
+	{ echo a; echo b; echo c; } >one &&
+	git add one &&
+
+	git checkout-index -f one &&
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'same, but with CR-LF line endings && cr-at-eol set' '
+	git config core.whitespace cr-at-eol &&
+	printf "a\r\n" >one &&
+	printf "b\r\n" >>one &&
+	printf "c\r\n" >>one &&
+	cp one save-one &&
+	printf "                 \r\n" >>one
+	git add one &&
+	printf "d\r\n" >>one &&
+	cp one expect &&
+	git diff -- one >patch &&
+	mv save-one one &&
+
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
+test_expect_success 'same, but with CR-LF line endings && cr-at-eol unset' '
+	git config --unset core.whitespace &&
+	printf "a\r\n" >one &&
+	printf "b\r\n" >>one &&
+	printf "c\r\n" >>one &&
+	cp one save-one &&
+	printf "                 \r\n" >>one
+	git add one &&
+	cp one expect &&
+	printf "d\r\n" >>one &&
+	git diff -- one >patch &&
+	mv save-one one &&
+	echo d >>expect &&
+
+	git apply --ignore-space-change --whitespace=fix patch &&
+	test_cmp one expect
+'
+
 test_done
diff --git a/t/t4200-rerere.sh b/t/t4200-rerere.sh
index bb402c378..70856d07e 100755
--- a/t/t4200-rerere.sh
+++ b/t/t4200-rerere.sh
@@ -8,40 +8,42 @@ test_description='git rerere
 
 . ./test-lib.sh
 
-cat > a1 << EOF
-Some title
-==========
-Whether 'tis nobler in the mind to suffer
-The slings and arrows of outrageous fortune,
-Or to take arms against a sea of troubles,
-And by opposing end them? To die: to sleep;
-No more; and by a sleep to say we end
-The heart-ache and the thousand natural shocks
-That flesh is heir to, 'tis a consummation
-Devoutly to be wish'd.
-EOF
-
-git add a1
-git commit -q -a -m initial
-
-git checkout -b first
-cat >> a1 << EOF
-Some title
-==========
-To die, to sleep;
-To sleep: perchance to dream: ay, there's the rub;
-For in that sleep of death what dreams may come
-When we have shuffled off this mortal coil,
-Must give us pause: there's the respect
-That makes calamity of so long life;
-EOF
-git commit -q -a -m first
-
-git checkout -b second master
-git show first:a1 |
-sed -e 's/To die, t/To die! T/' -e 's/Some title/Some Title/' > a1
-echo "* END *" >>a1
-git commit -q -a -m second
+test_expect_success 'setup' "
+	cat > a1 <<- EOF &&
+	Some title
+	==========
+	Whether 'tis nobler in the mind to suffer
+	The slings and arrows of outrageous fortune,
+	Or to take arms against a sea of troubles,
+	And by opposing end them? To die: to sleep;
+	No more; and by a sleep to say we end
+	The heart-ache and the thousand natural shocks
+	That flesh is heir to, 'tis a consummation
+	Devoutly to be wish'd.
+	EOF
+
+	git add a1 &&
+	git commit -q -a -m initial &&
+
+	git checkout -b first &&
+	cat >> a1 <<- EOF &&
+	Some title
+	==========
+	To die, to sleep;
+	To sleep: perchance to dream: ay, there's the rub;
+	For in that sleep of death what dreams may come
+	When we have shuffled off this mortal coil,
+	Must give us pause: there's the respect
+	That makes calamity of so long life;
+	EOF
+	git commit -q -a -m first &&
+
+	git checkout -b second master &&
+	git show first:a1 |
+	sed -e 's/To die, t/To die! T/' -e 's/Some title/Some Title/' > a1 &&
+	echo '* END *' >>a1 &&
+	git commit -q -a -m second
+"
 
 test_expect_success 'nothing recorded without rerere' '
 	(rm -rf .git/rr-cache; git config rerere.enabled false) &&
diff --git a/t/t4253-am-keep-cr-dos.sh b/t/t4253-am-keep-cr-dos.sh
new file mode 100755
index 000000000..735e55d77
--- /dev/null
+++ b/t/t4253-am-keep-cr-dos.sh
@@ -0,0 +1,96 @@
+#!/bin/sh
+#
+# Copyright (c) 2010 Stefan-W. Hahn
+#
+
+test_description='git-am mbox with dos line ending.
+
+'
+. ./test-lib.sh
+
+# Three patches which will be added as files with dos line ending.
+
+cat >file1 <<\EOF
+line 1
+EOF
+
+cat >file1a <<\EOF
+line 1
+line 4
+EOF
+
+cat >file2 <<\EOF
+line 1
+line 2
+EOF
+
+cat >file3 <<\EOF
+line 1
+line 2
+line 3
+EOF
+
+test_expect_success 'setup repository with dos files' '
+	append_cr <file1 >file &&
+	git add file &&
+	git commit -m Initial &&
+	git tag initial &&
+	append_cr <file2 >file &&
+	git commit -a -m Second &&
+	append_cr <file3 >file &&
+	git commit -a -m Third
+'
+
+test_expect_success 'am with dos files without --keep-cr' '
+	git checkout -b dosfiles initial &&
+	git format-patch -k initial..master &&
+	test_must_fail git am -k -3 000*.patch &&
+	git am --abort &&
+	rm -rf .git/rebase-apply 000*.patch
+'
+
+test_expect_success 'am with dos files with --keep-cr' '
+	git checkout -b dosfiles-keep-cr initial &&
+	git format-patch -k --stdout initial..master | git am --keep-cr -k -3 &&
+	git diff --exit-code master
+'
+
+test_expect_success 'am with dos files config am.keepcr' '
+	git config am.keepcr 1 &&
+	git checkout -b dosfiles-conf-keepcr initial &&
+	git format-patch -k --stdout initial..master | git am -k -3 &&
+	git diff --exit-code master
+'
+
+test_expect_success 'am with dos files config am.keepcr overriden by --no-keep-cr' '
+	git config am.keepcr 1 &&
+	git checkout -b dosfiles-conf-keepcr-override initial &&
+	git format-patch -k initial..master &&
+	test_must_fail git am -k -3 --no-keep-cr 000*.patch &&
+	git am --abort &&
+	rm -rf .git/rebase-apply 000*.patch
+'
+
+test_expect_success 'am with dos files with --keep-cr continue' '
+	git checkout -b dosfiles-keep-cr-continue initial &&
+	git format-patch -k initial..master &&
+	append_cr <file1a >file &&
+	git commit -m "different patch" file &&
+	test_must_fail git am --keep-cr -k -3 000*.patch &&
+	append_cr <file2 >file &&
+	git add file &&
+	git am -3 --resolved &&
+	git diff --exit-code master
+'
+
+test_expect_success 'am with unix files config am.keepcr overriden by --no-keep-cr' '
+	git config am.keepcr 1 &&
+	git checkout -b unixfiles-conf-keepcr-override initial &&
+	cp -f file1 file &&
+	git commit -m "line ending to unix" file &&
+	git format-patch -k initial..master &&
+	git am -k -3 --no-keep-cr 000*.patch &&
+	git diff --exit-code -w master
+'
+
+test_done
diff --git a/t/t5100/msg0015 b/t/t5100/msg0015
index 957723868..4abb3d5c6 100644
--- a/t/t5100/msg0015
+++ b/t/t5100/msg0015
@@ -1,2 +1,2 @@
-- a list
+  - a list
   - of stuff
diff --git a/t/t5304-prune.sh b/t/t5304-prune.sh
index 3c6687abe..e2ed13dba 100755
--- a/t/t5304-prune.sh
+++ b/t/t5304-prune.sh
@@ -148,6 +148,38 @@ test_expect_success 'gc --prune=<date>' '
 
 '
 
+test_expect_success 'gc --prune=never' '
+
+	add_blob &&
+	git gc --prune=never &&
+	test -f $BLOB_FILE &&
+	git gc --prune=now &&
+	test ! -f $BLOB_FILE
+
+'
+
+test_expect_success 'gc respects gc.pruneExpire=never' '
+
+	git config gc.pruneExpire never &&
+	add_blob &&
+	git gc &&
+	test -f $BLOB_FILE &&
+	git config gc.pruneExpire now &&
+	git gc &&
+	test ! -f $BLOB_FILE
+
+'
+
+test_expect_success 'prune --expire=never' '
+
+	add_blob &&
+	git prune --expire=never &&
+	test -f $BLOB_FILE &&
+	git prune &&
+	test ! -f $BLOB_FILE
+
+'
+
 test_expect_success 'gc: prune old objects after local clone' '
 	add_blob &&
 	test-chmtime =-$((2*$week+1)) $BLOB_FILE &&
diff --git a/t/t5516-fetch-push.sh b/t/t5516-fetch-push.sh
index 0f04b2e89..2de98e656 100755
--- a/t/t5516-fetch-push.sh
+++ b/t/t5516-fetch-push.sh
@@ -660,4 +660,54 @@ test_expect_success 'push with branches containing #' '
 	git checkout master
 '
 
+test_expect_success 'push --porcelain' '
+	mk_empty &&
+	echo >.git/foo  "To testrepo" &&
+	echo >>.git/foo "*	refs/heads/master:refs/remotes/origin/master	[new branch]"  &&
+	echo >>.git/foo "Done" &&
+	git push >.git/bar --porcelain  testrepo refs/heads/master:refs/remotes/origin/master &&
+	(
+		cd testrepo &&
+		r=$(git show-ref -s --verify refs/remotes/origin/master) &&
+		test "z$r" = "z$the_commit" &&
+		test 1 = $(git for-each-ref refs/remotes/origin | wc -l)
+	) &&
+	test_cmp .git/foo .git/bar
+'
+
+test_expect_success 'push --porcelain bad url' '
+	mk_empty &&
+	test_must_fail git push >.git/bar --porcelain asdfasdfasd refs/heads/master:refs/remotes/origin/master &&
+	test_must_fail grep -q Done .git/bar
+'
+
+test_expect_success 'push --porcelain rejected' '
+	mk_empty &&
+	git push testrepo refs/heads/master:refs/remotes/origin/master &&
+	(cd testrepo &&
+		git reset --hard origin/master^
+		git config receive.denyCurrentBranch true) &&
+
+	echo >.git/foo  "To testrepo"  &&
+	echo >>.git/foo "!	refs/heads/master:refs/heads/master	[remote rejected] (branch is currently checked out)" &&
+
+	test_must_fail git push >.git/bar --porcelain  testrepo refs/heads/master:refs/heads/master &&
+	test_cmp .git/foo .git/bar
+'
+
+test_expect_success 'push --porcelain --dry-run rejected' '
+	mk_empty &&
+	git push testrepo refs/heads/master:refs/remotes/origin/master &&
+	(cd testrepo &&
+		git reset --hard origin/master
+		git config receive.denyCurrentBranch true) &&
+
+	echo >.git/foo  "To testrepo"  &&
+	echo >>.git/foo "!	refs/heads/master^:refs/heads/master	[rejected] (non-fast-forward)" &&
+	echo >>.git/foo "Done" &&
+
+	test_must_fail git push >.git/bar --porcelain  --dry-run testrepo refs/heads/master^:refs/heads/master &&
+	test_cmp .git/foo .git/bar
+'
+
 test_done
diff --git a/t/t5521-pull-options.sh b/t/t5521-pull-options.sh
index 83e2e8ab8..1b06691bb 100755
--- a/t/t5521-pull-options.sh
+++ b/t/t5521-pull-options.sh
@@ -4,8 +4,6 @@ test_description='pull options'
 
 . ./test-lib.sh
 
-D=`pwd`
-
 test_expect_success 'setup' '
 	mkdir parent &&
 	(cd parent && git init &&
@@ -13,48 +11,83 @@ test_expect_success 'setup' '
 	 git commit -m one)
 '
 
-cd "$D"
-
 test_expect_success 'git pull -q' '
 	mkdir clonedq &&
-	cd clonedq &&
-	git pull -q "$D/parent" >out 2>err &&
-	test ! -s out
+	(cd clonedq && git init &&
+	git pull -q "../parent" >out 2>err &&
+	test ! -s err &&
+	test ! -s out)
 '
 
-cd "$D"
-
 test_expect_success 'git pull' '
 	mkdir cloned &&
-	cd cloned &&
-	git pull "$D/parent" >out 2>err &&
-	test -s out
+	(cd cloned && git init &&
+	git pull "../parent" >out 2>err &&
+	test -s err &&
+	test ! -s out)
 '
-cd "$D"
 
 test_expect_success 'git pull -v' '
 	mkdir clonedv &&
-	cd clonedv &&
-	git pull -v "$D/parent" >out 2>err &&
-	test -s out
+	(cd clonedv && git init &&
+	git pull -v "../parent" >out 2>err &&
+	test -s err &&
+	test ! -s out)
 '
 
-cd "$D"
-
 test_expect_success 'git pull -v -q' '
 	mkdir clonedvq &&
-	cd clonedvq &&
-	git pull -v -q "$D/parent" >out 2>err &&
-	test ! -s out
+	(cd clonedvq && git init &&
+	git pull -v -q "../parent" >out 2>err &&
+	test ! -s out &&
+	test ! -s err)
 '
 
-cd "$D"
-
 test_expect_success 'git pull -q -v' '
 	mkdir clonedqv &&
-	cd clonedqv &&
-	git pull -q -v "$D/parent" >out 2>err &&
-	test -s out
+	(cd clonedqv && git init &&
+	git pull -q -v "../parent" >out 2>err &&
+	test ! -s out &&
+	test -s err)
+'
+
+test_expect_success 'git pull --force' '
+	mkdir clonedoldstyle &&
+	(cd clonedoldstyle && git init &&
+	cat >>.git/config <<-\EOF &&
+	[remote "one"]
+		url = ../parent
+		fetch = refs/heads/master:refs/heads/mirror
+	[remote "two"]
+		url = ../parent
+		fetch = refs/heads/master:refs/heads/origin
+	[branch "master"]
+		remote = two
+		merge = refs/heads/master
+	EOF
+	git pull two &&
+	test_commit A &&
+	git branch -f origin &&
+	git pull --all --force
+	)
+'
+
+test_expect_success 'git pull --all' '
+	mkdir clonedmulti &&
+	(cd clonedmulti && git init &&
+	cat >>.git/config <<-\EOF &&
+	[remote "one"]
+		url = ../parent
+		fetch = refs/heads/*:refs/remotes/one/*
+	[remote "two"]
+		url = ../parent
+		fetch = refs/heads/*:refs/remotes/two/*
+	[branch "master"]
+		remote = one
+		merge = refs/heads/master
+	EOF
+	git pull --all
+	)
 '
 
 test_done
diff --git a/t/t5540-http-push.sh b/t/t5540-http-push.sh
index bb18f8bfc..37fe87541 100755
--- a/t/t5540-http-push.sh
+++ b/t/t5540-http-push.sh
@@ -137,6 +137,9 @@ test_expect_success 'PUT and MOVE sends object to URLs with SHA-1 hash suffix' '
 
 '
 
+test_http_push_nonff "$HTTPD_DOCUMENT_ROOT_PATH"/test_repo.git \
+	"$ROOT_PATH"/test_repo_clone master
+
 stop_httpd
 
 test_done
diff --git a/t/t5541-http-push.sh b/t/t5541-http-push.sh
index 53f54a278..795dc2bcd 100755
--- a/t/t5541-http-push.sh
+++ b/t/t5541-http-push.sh
@@ -88,26 +88,8 @@ test_expect_success 'used receive-pack service' '
 	test_cmp exp act
 '
 
-test_expect_success 'non-fast-forward push fails' '
-	cd "$ROOT_PATH"/test_repo_clone &&
-	git checkout master &&
-	echo "changed" > path2 &&
-	git commit -a -m path2 --amend &&
-
-	HEAD=$(git rev-parse --verify HEAD) &&
-	!(git push -v origin >output 2>&1) &&
-	(cd "$HTTPD_DOCUMENT_ROOT_PATH"/test_repo.git &&
-	 test $HEAD != $(git rev-parse --verify HEAD))
-'
-
-test_expect_success 'non-fast-forward push show ref status' '
-	grep "^ ! \[rejected\][ ]*master -> master (non-fast-forward)$" output
-'
-
-test_expect_success 'non-fast-forward push shows help message' '
-	grep "To prevent you from losing history, non-fast-forward updates were rejected" \
-		output
-'
+test_http_push_nonff "$HTTPD_DOCUMENT_ROOT_PATH"/test_repo.git \
+	"$ROOT_PATH"/test_repo_clone master
 
 test_expect_success 'push fails for non-fast-forward refs unmatched by remote helper' '
 	# create a dissimilarly-named remote ref so that git is unable to match the
diff --git a/t/t6023-merge-file.sh b/t/t6023-merge-file.sh
index d605024cf..5034dd135 100755
--- a/t/t6023-merge-file.sh
+++ b/t/t6023-merge-file.sh
@@ -215,4 +215,41 @@ test_expect_success '"diff3 -m" style output (2)' '
 	test_cmp expect actual
 '
 
+cat >expect <<\EOF
+Dominus regit me,
+<<<<<<<<<< new8.txt
+et nihil mihi deerit;
+
+
+
+
+In loco pascuae ibi me collocavit;
+super aquam refectionis educavit me.
+||||||||||
+et nihil mihi deerit.
+In loco pascuae ibi me collocavit,
+super aquam refectionis educavit me;
+==========
+et nihil mihi deerit,
+
+
+
+
+In loco pascuae ibi me collocavit --
+super aquam refectionis educavit me,
+>>>>>>>>>> new9.txt
+animam meam convertit,
+deduxit me super semitas jusitiae,
+propter nomen suum.
+Nam et si ambulavero in medio umbrae mortis,
+non timebo mala, quoniam TU mecum es:
+virga tua et baculus tuus ipsa me consolata sunt.
+EOF
+
+test_expect_success 'marker size' '
+	test_must_fail git merge-file -p --marker-size=10 \
+		new8.txt new5.txt new9.txt >actual &&
+	test_cmp expect actual
+'
+
 test_done
diff --git a/t/t6030-bisect-porcelain.sh b/t/t6030-bisect-porcelain.sh
index c51865fdb..3b042aacd 100755
--- a/t/t6030-bisect-porcelain.sh
+++ b/t/t6030-bisect-porcelain.sh
@@ -567,6 +567,11 @@ test_expect_success 'skipping away from skipped commit' '
 	test "$para3" = "$PARA_HASH3"
 '
 
+test_expect_success 'erroring out when using bad path parameters' '
+	test_must_fail git bisect start $PARA_HASH7 $HASH1 -- foobar 2> error.txt &&
+	grep "bad path parameters" error.txt
+'
+
 #
 #
 test_done
diff --git a/t/t7002-grep.sh b/t/t7002-grep.sh
index ebae1522c..e249c3ed4 100755
--- a/t/t7002-grep.sh
+++ b/t/t7002-grep.sh
@@ -353,7 +353,7 @@ test_expect_success 'log grep (4)' '
 '
 
 test_expect_success 'log grep (5)' '
-	git log --author=Thor -F --grep=Thu --pretty=tformat:%s >actual &&
+	git log --author=Thor -F --pretty=tformat:%s >actual &&
 	( echo third ; echo initial ) >expect &&
 	test_cmp expect actual
 '
@@ -364,6 +364,14 @@ test_expect_success 'log grep (6)' '
 	test_cmp expect actual
 '
 
+test_expect_success 'log --grep --author implicitly uses all-match' '
+	# grep matches initial and second but not third
+	# author matches only initial and third
+	git log --author="A U Thor" --grep=s --grep=l --format=%s >actual &&
+	echo initial >expect &&
+	test_cmp expect actual
+'
+
 test_expect_success 'grep with CE_VALID file' '
 	git update-index --assume-unchanged t/t &&
 	rm t/t &&
diff --git a/t/t7006-pager.sh b/t/t7006-pager.sh
new file mode 100755
index 000000000..d9202d5af
--- /dev/null
+++ b/t/t7006-pager.sh
@@ -0,0 +1,176 @@
+#!/bin/sh
+
+test_description='Test automatic use of a pager.'
+
+. ./test-lib.sh
+
+rm -f stdout_is_tty
+test_expect_success 'set up terminal for tests' '
+	if test -t 1
+	then
+		: > stdout_is_tty
+	elif
+		test_have_prereq PERL &&
+		"$PERL_PATH" "$TEST_DIRECTORY"/t7006/test-terminal.perl \
+			sh -c "test -t 1"
+	then
+		: > test_terminal_works
+	fi
+'
+
+if test -e stdout_is_tty
+then
+	test_terminal() { "$@"; }
+	test_set_prereq TTY
+elif test -e test_terminal_works
+then
+	test_terminal() {
+		"$PERL_PATH" "$TEST_DIRECTORY"/t7006/test-terminal.perl "$@"
+	}
+	test_set_prereq TTY
+else
+	say no usable terminal, so skipping some tests
+fi
+
+unset GIT_PAGER GIT_PAGER_IN_USE
+git config --unset core.pager
+PAGER='cat > paginated.out'
+export PAGER
+
+test_expect_success 'setup' '
+	test_commit initial
+'
+
+rm -f paginated.out
+test_expect_success TTY 'some commands use a pager' '
+	test_terminal git log &&
+	test -e paginated.out
+'
+
+rm -f paginated.out
+test_expect_success TTY 'some commands do not use a pager' '
+	test_terminal git rev-list HEAD &&
+	! test -e paginated.out
+'
+
+rm -f paginated.out
+test_expect_success 'no pager when stdout is a pipe' '
+	git log | cat &&
+	! test -e paginated.out
+'
+
+rm -f paginated.out
+test_expect_success 'no pager when stdout is a regular file' '
+	git log > file &&
+	! test -e paginated.out
+'
+
+rm -f paginated.out
+test_expect_success TTY 'git --paginate rev-list uses a pager' '
+	test_terminal git --paginate rev-list HEAD &&
+	test -e paginated.out
+'
+
+rm -f file paginated.out
+test_expect_success 'no pager even with --paginate when stdout is a pipe' '
+	git --paginate log | cat &&
+	! test -e paginated.out
+'
+
+rm -f paginated.out
+test_expect_success TTY 'no pager with --no-pager' '
+	test_terminal git --no-pager log &&
+	! test -e paginated.out
+'
+
+# A colored commit log will begin with an appropriate ANSI escape
+# for the first color; the text "commit" comes later.
+colorful() {
+	read firstline < $1
+	! expr "$firstline" : "^[a-zA-Z]" >/dev/null
+}
+
+rm -f colorful.log colorless.log
+test_expect_success 'tests can detect color' '
+	git log --no-color > colorless.log &&
+	git log --color > colorful.log &&
+	! colorful colorless.log &&
+	colorful colorful.log
+'
+
+rm -f colorless.log
+git config color.ui auto
+test_expect_success 'no color when stdout is a regular file' '
+	git log > colorless.log &&
+	! colorful colorless.log
+'
+
+rm -f paginated.out
+git config color.ui auto
+test_expect_success TTY 'color when writing to a pager' '
+	TERM=vt100 test_terminal git log &&
+	colorful paginated.out
+'
+
+rm -f colorful.log
+git config color.ui auto
+test_expect_success 'color when writing to a file intended for a pager' '
+	TERM=vt100 GIT_PAGER_IN_USE=true git log > colorful.log &&
+	colorful colorful.log
+'
+
+unset PAGER GIT_PAGER
+git config --unset core.pager
+test_expect_success 'determine default pager' '
+	less=$(git var GIT_PAGER) &&
+	test -n "$less"
+'
+
+if expr "$less" : '^[a-z]*$' > /dev/null && test_have_prereq TTY
+then
+	test_set_prereq SIMPLEPAGER
+fi
+
+unset PAGER GIT_PAGER
+git config --unset core.pager
+rm -f default_pager_used
+test_expect_success SIMPLEPAGER 'default pager is used by default' '
+	cat > $less <<-EOF &&
+	#!$SHELL_PATH
+	wc > default_pager_used
+	EOF
+	chmod +x $less &&
+	PATH=.:$PATH test_terminal git log &&
+	test -e default_pager_used
+'
+
+unset GIT_PAGER
+git config --unset core.pager
+rm -f PAGER_used
+test_expect_success TTY 'PAGER overrides default pager' '
+	PAGER="wc > PAGER_used" &&
+	export PAGER &&
+	test_terminal git log &&
+	test -e PAGER_used
+'
+
+unset GIT_PAGER
+rm -f core.pager_used
+test_expect_success TTY 'core.pager overrides PAGER' '
+	PAGER=wc &&
+	export PAGER &&
+	git config core.pager "wc > core.pager_used" &&
+	test_terminal git log &&
+	test -e core.pager_used
+'
+
+rm -f GIT_PAGER_used
+test_expect_success TTY 'GIT_PAGER overrides core.pager' '
+	git config core.pager wc &&
+	GIT_PAGER="wc > GIT_PAGER_used" &&
+	export GIT_PAGER &&
+	test_terminal git log &&
+	test -e GIT_PAGER_used
+'
+
+test_done
diff --git a/t/t7006/test-terminal.perl b/t/t7006/test-terminal.perl
new file mode 100755
index 000000000..73ff80937
--- /dev/null
+++ b/t/t7006/test-terminal.perl
@@ -0,0 +1,58 @@
+#!/usr/bin/perl
+use strict;
+use warnings;
+use IO::Pty;
+use File::Copy;
+
+# Run @$argv in the background with stdout redirected to $out.
+sub start_child {
+	my ($argv, $out) = @_;
+	my $pid = fork;
+	if (not defined $pid) {
+		die "fork failed: $!"
+	} elsif ($pid == 0) {
+		open STDOUT, ">&", $out;
+		close $out;
+		exec(@$argv) or die "cannot exec '$argv->[0]': $!"
+	}
+	return $pid;
+}
+
+# Wait for $pid to finish.
+sub finish_child {
+	# Simplified from wait_or_whine() in run-command.c.
+	my ($pid) = @_;
+
+	my $waiting = waitpid($pid, 0);
+	if ($waiting < 0) {
+		die "waitpid failed: $!";
+	} elsif ($? & 127) {
+		my $code = $? & 127;
+		warn "died of signal $code";
+		return $code - 128;
+	} else {
+		return $? >> 8;
+	}
+}
+
+sub xsendfile {
+	my ($out, $in) = @_;
+
+	# Note: the real sendfile() cannot read from a terminal.
+
+	# It is unspecified by POSIX whether reads
+	# from a disconnected terminal will return
+	# EIO (as in AIX 4.x, IRIX, and Linux) or
+	# end-of-file.  Either is fine.
+	copy($in, $out, 4096) or $!{EIO} or die "cannot copy from child: $!";
+}
+
+if ($#ARGV < 1) {
+	die "usage: test-terminal program args";
+}
+my $master = new IO::Pty;
+my $slave = $master->slave;
+my $pid = start_child(\@ARGV, $slave);
+close $slave;
+xsendfile(\*STDOUT, $master);
+exit(finish_child($pid));
diff --git a/t/t7103-reset-bare.sh b/t/t7103-reset-bare.sh
index afb55b3a4..1eef93c2b 100755
--- a/t/t7103-reset-bare.sh
+++ b/t/t7103-reset-bare.sh
@@ -11,21 +11,26 @@ test_expect_success 'setup non-bare' '
 	git commit -a -m two
 '
 
-test_expect_success 'hard reset requires a worktree' '
+test_expect_success '"hard" reset requires a worktree' '
 	(cd .git &&
 	 test_must_fail git reset --hard)
 '
 
-test_expect_success 'merge reset requires a worktree' '
+test_expect_success '"merge" reset requires a worktree' '
 	(cd .git &&
 	 test_must_fail git reset --merge)
 '
 
-test_expect_success 'mixed reset is ok' '
+test_expect_success '"keep" reset requires a worktree' '
+	(cd .git &&
+	 test_must_fail git reset --keep)
+'
+
+test_expect_success '"mixed" reset is ok' '
 	(cd .git && git reset)
 '
 
-test_expect_success 'soft reset is ok' '
+test_expect_success '"soft" reset is ok' '
 	(cd .git && git reset --soft)
 '
 
@@ -40,19 +45,23 @@ test_expect_success 'setup bare' '
 	cd bare.git
 '
 
-test_expect_success 'hard reset is not allowed in bare' '
+test_expect_success '"hard" reset is not allowed in bare' '
 	test_must_fail git reset --hard HEAD^
 '
 
-test_expect_success 'merge reset is not allowed in bare' '
+test_expect_success '"merge" reset is not allowed in bare' '
 	test_must_fail git reset --merge HEAD^
 '
 
-test_expect_success 'mixed reset is not allowed in bare' '
+test_expect_success '"keep" reset is not allowed in bare' '
+	test_must_fail git reset --keep HEAD^
+'
+
+test_expect_success '"mixed" reset is not allowed in bare' '
 	test_must_fail git reset --mixed HEAD^
 '
 
-test_expect_success 'soft reset is allowed in bare' '
+test_expect_success '"soft" reset is allowed in bare' '
 	git reset --soft HEAD^ &&
 	test "`git show --pretty=format:%s | head -n 1`" = "one"
 '
diff --git a/t/t7110-reset-merge.sh b/t/t7110-reset-merge.sh
index 8704d0019..70cdd8e61 100755
--- a/t/t7110-reset-merge.sh
+++ b/t/t7110-reset-merge.sh
@@ -3,7 +3,7 @@
 # Copyright (c) 2009 Christian Couder
 #
 
-test_description='Tests for "git reset --merge"'
+test_description='Tests for "git reset" with "--merge" and "--keep" options'
 
 . ./test-lib.sh
 
@@ -47,6 +47,30 @@ test_expect_success 'reset --merge is ok when switching back' '
 #
 #           working index HEAD target         working index HEAD
 #           ----------------------------------------------------
+# file1:     C       C     C    D     --keep   D       D     D
+# file2:     C       D     D    D     --keep   C       D     D
+test_expect_success 'reset --keep is ok with changes in file it does not touch' '
+    git reset --hard second &&
+    cat file1 >file2 &&
+    git reset --keep HEAD^ &&
+    ! grep 4 file1 &&
+    grep 4 file2 &&
+    test "$(git rev-parse HEAD)" = "$(git rev-parse initial)" &&
+    test -z "$(git diff --cached)"
+'
+
+test_expect_success 'reset --keep is ok when switching back' '
+    git reset --keep second &&
+    grep 4 file1 &&
+    grep 4 file2 &&
+    test "$(git rev-parse HEAD)" = "$(git rev-parse second)" &&
+    test -z "$(git diff --cached)"
+'
+
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
 # file1:     B       B     C    D     --merge  D       D     D
 # file2:     C       D     D    D     --merge  C       D     D
 test_expect_success 'reset --merge discards changes added to index (1)' '
@@ -78,6 +102,18 @@ test_expect_success 'reset --merge is ok again when switching back (1)' '
 #
 #           working index HEAD target         working index HEAD
 #           ----------------------------------------------------
+# file1:     B       B     C    D     --keep   (disallowed)
+test_expect_success 'reset --keep fails with changes in index in files it touches' '
+    git reset --hard second &&
+    echo "line 5" >> file1 &&
+    git add file1 &&
+    test_must_fail git reset --keep HEAD^
+'
+
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
 # file1:     C       C     C    D     --merge  D       D     D
 # file2:     C       C     D    D     --merge  D       D     D
 test_expect_success 'reset --merge discards changes added to index (2)' '
@@ -104,6 +140,30 @@ test_expect_success 'reset --merge is ok again when switching back (2)' '
 #
 #           working index HEAD target         working index HEAD
 #           ----------------------------------------------------
+# file1:     C       C     C    D     --keep   D       D     D
+# file2:     C       C     D    D     --keep   C       D     D
+test_expect_success 'reset --keep keeps changes it does not touch' '
+    git reset --hard second &&
+    echo "line 4" >> file2 &&
+    git add file2 &&
+    git reset --keep HEAD^ &&
+    grep 4 file2 &&
+    test "$(git rev-parse HEAD)" = "$(git rev-parse initial)" &&
+    test -z "$(git diff --cached)"
+'
+
+test_expect_success 'reset --keep keeps changes when switching back' '
+    git reset --keep second &&
+    grep 4 file2 &&
+    grep 4 file1 &&
+    test "$(git rev-parse HEAD)" = "$(git rev-parse second)" &&
+    test -z "$(git diff --cached)"
+'
+
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
 # file1:     A       B     B    C     --merge  (disallowed)
 test_expect_success 'reset --merge fails with changes in file it touches' '
     git reset --hard second &&
@@ -116,6 +176,22 @@ test_expect_success 'reset --merge fails with changes in file it touches' '
     grep file1 err.log | grep "not uptodate"
 '
 
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
+# file1:     A       B     B    C     --keep   (disallowed)
+test_expect_success 'reset --keep fails with changes in file it touches' '
+    git reset --hard second &&
+    echo "line 5" >> file1 &&
+    test_tick &&
+    git commit -m "add line 5" file1 &&
+    sed -e "s/line 1/changed line 1/" <file1 >file3 &&
+    mv file3 file1 &&
+    test_must_fail git reset --keep HEAD^ 2>err.log &&
+    grep file1 err.log | grep "not uptodate"
+'
+
 test_expect_success 'setup 3 different branches' '
     git reset --hard second &&
     git branch branch1 &&
@@ -156,6 +232,18 @@ test_expect_success '"reset --merge HEAD^" is ok with pending merge' '
 #
 #           working index HEAD target         working index HEAD
 #           ----------------------------------------------------
+# file1:     X       U     B    C     --keep   (disallowed)
+test_expect_success '"reset --keep HEAD^" fails with pending merge' '
+    git reset --hard third &&
+    test_must_fail git merge branch1 &&
+    test_must_fail git reset --keep HEAD^ 2>err.log &&
+    grep "middle of a merge" err.log
+'
+
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
 # file1:     X       U     B    B     --merge  B       B     B
 test_expect_success '"reset --merge HEAD" is ok with pending merge' '
     git reset --hard third &&
@@ -166,7 +254,19 @@ test_expect_success '"reset --merge HEAD" is ok with pending merge' '
     test -z "$(git diff)"
 '
 
-test_expect_success '--merge with added/deleted' '
+# The next test will test the following:
+#
+#           working index HEAD target         working index HEAD
+#           ----------------------------------------------------
+# file1:     X       U     B    B     --keep   (disallowed)
+test_expect_success '"reset --keep HEAD" fails with pending merge' '
+    git reset --hard third &&
+    test_must_fail git merge branch1 &&
+    test_must_fail git reset --keep HEAD 2>err.log &&
+    grep "middle of a merge" err.log
+'
+
+test_expect_success '--merge is ok with added/deleted merge' '
     git reset --hard third &&
     rm -f file2 &&
     test_must_fail git merge branch3 &&
@@ -180,4 +280,16 @@ test_expect_success '--merge with added/deleted' '
     git diff --exit-code --cached
 '
 
+test_expect_success '--keep fails with added/deleted merge' '
+    git reset --hard third &&
+    rm -f file2 &&
+    test_must_fail git merge branch3 &&
+    ! test -f file2 &&
+    test -f file3 &&
+    git diff --exit-code file3 &&
+    git diff --exit-code branch3 file3 &&
+    test_must_fail git reset --keep HEAD 2>err.log &&
+    grep "middle of a merge" err.log
+'
+
 test_done
diff --git a/t/t7111-reset-table.sh b/t/t7111-reset-table.sh
index de896c948..ce421ad5a 100755
--- a/t/t7111-reset-table.sh
+++ b/t/t7111-reset-table.sh
@@ -44,26 +44,32 @@ A B C D soft   A B D
 A B C D mixed  A D D
 A B C D hard   D D D
 A B C D merge  XXXXX
+A B C D keep   XXXXX
 A B C C soft   A B C
 A B C C mixed  A C C
 A B C C hard   C C C
 A B C C merge  XXXXX
+A B C C keep   A C C
 B B C D soft   B B D
 B B C D mixed  B D D
 B B C D hard   D D D
 B B C D merge  D D D
+B B C D keep   XXXXX
 B B C C soft   B B C
 B B C C mixed  B C C
 B B C C hard   C C C
 B B C C merge  C C C
+B B C C keep   B C C
 B C C D soft   B C D
 B C C D mixed  B D D
 B C C D hard   D D D
 B C C D merge  XXXXX
+B C C D keep   XXXXX
 B C C C soft   B C C
 B C C C mixed  B C C
 B C C C hard   C C C
 B C C C merge  B C C
+B C C C keep   B C C
 EOF
 
 test_expect_success 'setting up branches to test with unmerged entries' '
@@ -104,10 +110,12 @@ X U B C soft   XXXXX
 X U B C mixed  X C C
 X U B C hard   C C C
 X U B C merge  C C C
+X U B C keep   XXXXX
 X U B B soft   XXXXX
 X U B B mixed  X B B
 X U B B hard   B B B
 X U B B merge  B B B
+X U B B keep   XXXXX
 EOF
 
 test_done
diff --git a/t/t7401-submodule-summary.sh b/t/t7401-submodule-summary.sh
index d3c039f72..cee319da0 100755
--- a/t/t7401-submodule-summary.sh
+++ b/t/t7401-submodule-summary.sh
@@ -227,4 +227,11 @@ test_expect_success 'fail when using --files together with --cached' "
     test_must_fail git submodule summary --files --cached
 "
 
+test_expect_success 'should not fail in an empty repo' "
+    git init xyzzy &&
+    cd xyzzy &&
+    git submodule summary >output 2>&1 &&
+    test_cmp output /dev/null
+"
+
 test_done
diff --git a/t/t7406-submodule-update.sh b/t/t7406-submodule-update.sh
index 8e2449d24..1382a8e58 100755
--- a/t/t7406-submodule-update.sh
+++ b/t/t7406-submodule-update.sh
@@ -28,6 +28,8 @@ test_expect_success 'setup a submodule tree' '
 	git commit -m upstream
 	git clone . super &&
 	git clone super submodule &&
+	git clone super rebasing &&
+	git clone super merging &&
 	(cd super &&
 	 git submodule add ../submodule submodule &&
 	 test_tick &&
@@ -45,6 +47,16 @@ test_expect_success 'setup a submodule tree' '
 	 ) &&
 	 git add submodule &&
 	 git commit -m "submodule update"
+	) &&
+	(cd super &&
+	 git submodule add ../rebasing rebasing &&
+	 test_tick &&
+	 git commit -m "rebasing"
+	) &&
+	(cd super &&
+	 git submodule add ../merging merging &&
+	 test_tick &&
+	 git commit -m "rebasing"
 	)
 '
 
@@ -177,21 +189,17 @@ test_expect_success 'submodule update - checkout in .git/config' '
 
 test_expect_success 'submodule init picks up rebase' '
 	(cd super &&
-	 git config submodule.rebasing.url git://non-existing/git &&
-	 git config submodule.rebasing.path does-not-matter &&
-	 git config submodule.rebasing.update rebase &&
+	 git config -f .gitmodules submodule.rebasing.update rebase &&
 	 git submodule init rebasing &&
-	 test "rebase" = $(git config submodule.rebasing.update)
+	 test "rebase" = "$(git config submodule.rebasing.update)"
 	)
 '
 
 test_expect_success 'submodule init picks up merge' '
 	(cd super &&
-	 git config submodule.merging.url git://non-existing/git &&
-	 git config submodule.merging.path does-not-matter &&
-	 git config submodule.merging.update merge &&
+	 git config -f .gitmodules submodule.merging.update merge &&
 	 git submodule init merging &&
-	 test "merge" = $(git config submodule.merging.update)
+	 test "merge" = "$(git config submodule.merging.update)"
 	)
 '
 
diff --git a/t/t8003-blame.sh b/t/t8003-blame.sh
index 3bbddd03c..230143cf3 100755
--- a/t/t8003-blame.sh
+++ b/t/t8003-blame.sh
@@ -11,7 +11,15 @@ test_expect_success setup '
 	echo B B B B B >two &&
 	echo C C C C C >tres &&
 	echo ABC >mouse &&
-	git add one two tres mouse &&
+	for i in 1 2 3 4 5 6 7 8 9
+	do
+		echo $i
+	done >nine_lines &&
+	for i in 1 2 3 4 5 6 7 8 9 a
+	do
+		echo $i
+	done >ten_lines &&
+	git add one two tres mouse nine_lines ten_lines &&
 	test_tick &&
 	GIT_AUTHOR_NAME=Initial git commit -m Initial &&
 
@@ -167,4 +175,14 @@ test_expect_success 'blame -L with invalid end' '
 	grep "has only 2 lines" errors
 '
 
+test_expect_success 'indent of line numbers, nine lines' '
+	git blame nine_lines >actual &&
+	test $(grep -c "  " actual) = 0
+'
+
+test_expect_success 'indent of line numbers, ten lines' '
+	git blame ten_lines >actual &&
+	test $(grep -c "  " actual) = 9
+'
+
 test_done
diff --git a/t/t9001-send-email.sh b/t/t9001-send-email.sh
index c09f37528..640b3d2bb 100755
--- a/t/t9001-send-email.sh
+++ b/t/t9001-send-email.sh
@@ -852,4 +852,70 @@ test_expect_success 'no warning with sendemail.chainreplyto = true' '
 	! grep "no-chain-reply-to" errors
 '
 
+test_expect_success 'sendemail.to works' '
+	git config --replace-all sendemail.to "Somebody <somebody@ex.com>" &&
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		$patches $patches >stdout &&
+	grep "To: Somebody <somebody@ex.com>" stdout
+'
+
+test_expect_success '--no-to overrides sendemail.to' '
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		--no-to \
+		--to=nobody@example.com \
+		$patches $patches >stdout &&
+	grep "To: nobody@example.com" stdout &&
+	! grep "To: Somebody <somebody@ex.com>" stdout
+'
+
+test_expect_success 'sendemail.cc works' '
+	git config --replace-all sendemail.cc "Somebody <somebody@ex.com>" &&
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		--to=nobody@example.com \
+		$patches $patches >stdout &&
+	grep "Cc: Somebody <somebody@ex.com>" stdout
+'
+
+test_expect_success '--no-cc overrides sendemail.cc' '
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		--no-cc \
+		--cc=bodies@example.com \
+		--to=nobody@example.com \
+		$patches $patches >stdout &&
+	grep "Cc: bodies@example.com" stdout &&
+	! grep "Cc: Somebody <somebody@ex.com>" stdout
+'
+
+test_expect_success 'sendemail.bcc works' '
+	git config --replace-all sendemail.bcc "Other <other@ex.com>" &&
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		--to=nobody@example.com \
+		--smtp-server relay.example.com \
+		$patches $patches >stdout &&
+	grep "RCPT TO:<other@ex.com>" stdout
+'
+
+test_expect_success '--no-bcc overrides sendemail.bcc' '
+	git send-email \
+		--dry-run \
+		--from="Example <nobody@example.com>" \
+		--no-bcc \
+		--bcc=bodies@example.com \
+		--to=nobody@example.com \
+		--smtp-server relay.example.com \
+		$patches $patches >stdout &&
+	grep "RCPT TO:<bodies@example.com>" stdout &&
+	! grep "RCPT TO:<other@ex.com>" stdout
+'
+
 test_done
diff --git a/t/t9119-git-svn-info.sh b/t/t9119-git-svn-info.sh
index 95741cbba..a9a558d29 100755
--- a/t/t9119-git-svn-info.sh
+++ b/t/t9119-git-svn-info.sh
@@ -7,9 +7,10 @@ test_description='git svn info'
 . ./lib-git-svn.sh
 
 # Tested with: svn, version 1.4.4 (r25188)
+# Tested with: svn, version 1.6.[12345689]
 v=`svn_cmd --version | sed -n -e 's/^svn, version \(1\.[0-9]*\.[0-9]*\).*$/\1/p'`
 case $v in
-1.[45].*)
+1.[456].*)
 	;;
 *)
 	say "skipping svn-info test (SVN version: $v not supported)"
diff --git a/t/t9150-svk-mergetickets.sh b/t/t9150-svk-mergetickets.sh
index 53581425c..24c2421bf 100755
--- a/t/t9150-svk-mergetickets.sh
+++ b/t/t9150-svk-mergetickets.sh
@@ -11,6 +11,7 @@ test_expect_success 'load svk depot' "
 	svnadmin load -q '$rawsvnrepo' \
 	  < '$TEST_DIRECTORY/t9150/svk-merge.dump' &&
 	git svn init --minimize-url -R svkmerge \
+	  --rewrite-root=http://svn.example.org \
 	  -T trunk -b branches '$svnrepo' &&
 	git svn fetch --all
 	"
diff --git a/t/t9151-svn-mergeinfo.sh b/t/t9151-svn-mergeinfo.sh
index 16408244d..250c651ea 100755
--- a/t/t9151-svn-mergeinfo.sh
+++ b/t/t9151-svn-mergeinfo.sh
@@ -11,6 +11,7 @@ test_expect_success 'load svn dump' "
 	svnadmin load -q '$rawsvnrepo' \
 	  < '$TEST_DIRECTORY/t9151/svn-mergeinfo.dump' &&
 	git svn init --minimize-url -R svnmerge \
+	  --rewrite-root=http://svn.example.org \
 	  -T trunk -b branches '$svnrepo' &&
 	git svn fetch --all
 	"
diff --git a/t/t9400-git-cvsserver-server.sh b/t/t9400-git-cvsserver-server.sh
index 4327eb8ba..daef2d6c2 100755
--- a/t/t9400-git-cvsserver-server.sh
+++ b/t/t9400-git-cvsserver-server.sh
@@ -226,7 +226,7 @@ test_expect_success 'gitcvs.ext.enabled = true' \
   'GIT_DIR="$SERVERDIR" git config --bool gitcvs.ext.enabled true &&
    GIT_DIR="$SERVERDIR" git config --bool gitcvs.enabled false &&
    GIT_CONFIG="$git_config" cvs -Q co -d cvswork2 master >cvs.log 2>&1 &&
-   diff -q cvswork cvswork2'
+   test_cmp cvswork cvswork2'
 
 rm -fr cvswork2
 test_expect_success 'gitcvs.ext.enabled = false' \
@@ -247,7 +247,7 @@ test_expect_success 'gitcvs.dbname' \
   'GIT_DIR="$SERVERDIR" git config --bool gitcvs.ext.enabled true &&
    GIT_DIR="$SERVERDIR" git config gitcvs.dbname %Ggitcvs.%a.%m.sqlite &&
    GIT_CONFIG="$git_config" cvs -Q co -d cvswork2 master >cvs.log 2>&1 &&
-   diff -q cvswork cvswork2 &&
+   test_cmp cvswork cvswork2 &&
    test -f "$SERVERDIR/gitcvs.ext.master.sqlite" &&
    cmp "$SERVERDIR/gitcvs.master.sqlite" "$SERVERDIR/gitcvs.ext.master.sqlite"'
 
@@ -257,7 +257,7 @@ test_expect_success 'gitcvs.ext.dbname' \
    GIT_DIR="$SERVERDIR" git config gitcvs.ext.dbname %Ggitcvs1.%a.%m.sqlite &&
    GIT_DIR="$SERVERDIR" git config gitcvs.dbname %Ggitcvs2.%a.%m.sqlite &&
    GIT_CONFIG="$git_config" cvs -Q co -d cvswork2 master >cvs.log 2>&1 &&
-   diff -q cvswork cvswork2 &&
+   test_cmp cvswork cvswork2 &&
    test -f "$SERVERDIR/gitcvs1.ext.master.sqlite" &&
    test ! -f "$SERVERDIR/gitcvs2.ext.master.sqlite" &&
    cmp "$SERVERDIR/gitcvs.master.sqlite" "$SERVERDIR/gitcvs1.ext.master.sqlite"'
@@ -282,7 +282,7 @@ test_expect_success 'cvs update (create new file)' \
    cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update &&
    test "$(echo $(grep testfile1 CVS/Entries|cut -d/ -f2,3,5))" = "testfile1/1.1/" &&
-   diff -q testfile1 ../testfile1'
+   test_cmp testfile1 ../testfile1'
 
 cd "$WORKDIR"
 test_expect_success 'cvs update (update existing file)' \
@@ -293,7 +293,7 @@ test_expect_success 'cvs update (update existing file)' \
    cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update &&
    test "$(echo $(grep testfile1 CVS/Entries|cut -d/ -f2,3,5))" = "testfile1/1.2/" &&
-   diff -q testfile1 ../testfile1'
+   test_cmp testfile1 ../testfile1'
 
 cd "$WORKDIR"
 #TODO: cvsserver doesn't support update w/o -d
@@ -322,7 +322,7 @@ test_expect_success 'cvs update (subdirectories)' \
    (for dir in A A/B A/B/C A/D E; do
       filename="file_in_$(echo $dir|sed -e "s#/# #g")" &&
       if test "$(echo $(grep -v ^D $dir/CVS/Entries|cut -d/ -f2,3,5))" = "$filename/1.1/" &&
-           diff -q "$dir/$filename" "../$dir/$filename"; then
+	test_cmp "$dir/$filename" "../$dir/$filename"; then
         :
       else
         echo >failure
@@ -349,7 +349,7 @@ test_expect_success 'cvs update (re-add deleted file)' \
    cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update &&
    test "$(echo $(grep testfile1 CVS/Entries|cut -d/ -f2,3,5))" = "testfile1/1.4/" &&
-   diff -q testfile1 ../testfile1'
+   test_cmp testfile1 ../testfile1'
 
 cd "$WORKDIR"
 test_expect_success 'cvs update (merge)' \
@@ -366,7 +366,7 @@ test_expect_success 'cvs update (merge)' \
    cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update &&
    test "$(echo $(grep merge CVS/Entries|cut -d/ -f2,3,5))" = "merge/1.1/" &&
-   diff -q merge ../merge &&
+   test_cmp merge ../merge &&
    ( echo Line 0; cat merge ) >merge.tmp &&
    mv merge.tmp merge &&
    cd "$WORKDIR" &&
@@ -377,7 +377,7 @@ test_expect_success 'cvs update (merge)' \
    cd cvswork &&
    sleep 1 && touch merge &&
    GIT_CONFIG="$git_config" cvs -Q update &&
-   diff -q merge ../expected'
+   test_cmp merge ../expected'
 
 cd "$WORKDIR"
 
@@ -402,13 +402,13 @@ test_expect_success 'cvs update (conflict merge)' \
    git push gitcvs.git >/dev/null &&
    cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update &&
-   diff -q merge ../expected.C'
+   test_cmp merge ../expected.C'
 
 cd "$WORKDIR"
 test_expect_success 'cvs update (-C)' \
   'cd cvswork &&
    GIT_CONFIG="$git_config" cvs -Q update -C &&
-   diff -q merge ../merge'
+   test_cmp merge ../merge'
 
 cd "$WORKDIR"
 test_expect_success 'cvs update (merge no-op)' \
@@ -420,7 +420,7 @@ test_expect_success 'cvs update (merge no-op)' \
     cd cvswork &&
     sleep 1 && touch merge &&
     GIT_CONFIG="$git_config" cvs -Q update &&
-    diff -q merge ../merge'
+    test_cmp merge ../merge'
 
 cd "$WORKDIR"
 test_expect_success 'cvs update (-p)' '
diff --git a/t/t9500-gitweb-standalone-no-errors.sh b/t/t9500-gitweb-standalone-no-errors.sh
index 2fc7fdb12..63b6b060e 100755
--- a/t/t9500-gitweb-standalone-no-errors.sh
+++ b/t/t9500-gitweb-standalone-no-errors.sh
@@ -591,14 +591,22 @@ test_debug 'cat gitweb.log'
 # ----------------------------------------------------------------------
 # gitweb config and repo config
 
-cat >>gitweb_config.perl <<EOF
-
-\$feature{'blame'}{'override'} = 1;
-\$feature{'snapshot'}{'override'} = 1;
-\$feature{'avatar'}{'override'} = 1;
+cat >>gitweb_config.perl <<\EOF
+
+# turn on override for each overridable feature
+foreach my $key (keys %feature) {
+	if ($feature{$key}{'sub'}) {
+		$feature{$key}{'override'} = 1;
+	}
+}
 EOF
 
 test_expect_success \
+	'config override: projects list (implicit)' \
+	'gitweb_run'
+test_debug 'cat gitweb.log'
+
+test_expect_success \
 	'config override: tree view, features not overridden in repo config' \
 	'gitweb_run "p=.git;a=tree"'
 test_debug 'cat gitweb.log'
diff --git a/t/t9501-gitweb-standalone-http-status.sh b/t/t9501-gitweb-standalone-http-status.sh
index d196cc5ca..2487da129 100755
--- a/t/t9501-gitweb-standalone-http-status.sh
+++ b/t/t9501-gitweb-standalone-http-status.sh
@@ -15,9 +15,10 @@ code and message.'
 # ----------------------------------------------------------------------
 # snapshot settings
 
-test_commit \
-	'SnapshotTests' \
-	'i can has snapshot?'
+test_expect_success 'setup' "
+	test_commit 'SnapshotTests' 'i can has snapshot?'
+"
+
 
 cat >>gitweb_config.perl <<\EOF
 $feature{'snapshot'}{'override'} = 0;
diff --git a/t/t9600-cvsimport.sh b/t/t9600-cvsimport.sh
index 363345fae..b572ce3ab 100755
--- a/t/t9600-cvsimport.sh
+++ b/t/t9600-cvsimport.sh
@@ -47,13 +47,20 @@ EOF
 
 test_expect_success 'import a trivial module' '
 
-	git cvsimport -a -z 0 -C module-git module &&
+	git cvsimport -a -R -z 0 -C module-git module &&
 	test_cmp module-cvs/o_fortuna module-git/o_fortuna
 
 '
 
 test_expect_success 'pack refs' 'cd module-git && git gc && cd ..'
 
+test_expect_success 'initial import has correct .git/cvs-revisions' '
+
+	(cd module-git &&
+	 git log --format="o_fortuna 1.1 %H" -1) > expected &&
+	test_cmp expected module-git/.git/cvs-revisions
+'
+
 test_expect_success 'update cvs module' '
 
 	cd module-cvs &&
@@ -86,13 +93,21 @@ EOF
 test_expect_success 'update git module' '
 
 	cd module-git &&
-	git cvsimport -a -z 0 module &&
+	git cvsimport -a -R -z 0 module &&
 	git merge origin &&
 	cd .. &&
 	test_cmp module-cvs/o_fortuna module-git/o_fortuna
 
 '
 
+test_expect_success 'update has correct .git/cvs-revisions' '
+
+	(cd module-git &&
+	 git log --format="o_fortuna 1.1 %H" -1 HEAD^ &&
+	 git log --format="o_fortuna 1.2 %H" -1 HEAD) > expected &&
+	test_cmp expected module-git/.git/cvs-revisions
+'
+
 test_expect_success 'update cvs module' '
 
 	cd module-cvs &&
@@ -107,13 +122,22 @@ test_expect_success 'cvsimport.module config works' '
 
 	cd module-git &&
 		git config cvsimport.module module &&
-		git cvsimport -a -z0 &&
+		git cvsimport -a -R -z0 &&
 		git merge origin &&
 	cd .. &&
 	test_cmp module-cvs/tick module-git/tick
 
 '
 
+test_expect_success 'second update has correct .git/cvs-revisions' '
+
+	(cd module-git &&
+	 git log --format="o_fortuna 1.1 %H" -1 HEAD^^ &&
+	 git log --format="o_fortuna 1.2 %H" -1 HEAD^
+	 git log --format="tick 1.1 %H" -1 HEAD) > expected &&
+	test_cmp expected module-git/.git/cvs-revisions
+'
+
 test_expect_success 'import from a CVS working tree' '
 
 	$CVS co -d import-from-wt module &&
@@ -126,6 +150,12 @@ test_expect_success 'import from a CVS working tree' '
 
 '
 
+test_expect_success 'no .git/cvs-revisions created by default' '
+
+	! test -e import-from-wt/.git/cvs-revisions
+
+'
+
 test_expect_success 'test entire HEAD' 'test_cmp_branch_tree master'
 
 test_done
diff --git a/t/test-lib.sh b/t/test-lib.sh
index afd3053f9..a0e396a95 100644
--- a/t/test-lib.sh
+++ b/t/test-lib.sh
@@ -65,6 +65,8 @@ GIT_TEST_CMP=${GIT_TEST_CMP:-diff -u}
 # CDPATH into the environment
 unset CDPATH
 
+unset GREP_OPTIONS
+
 case $(echo $GIT_TRACE |tr "[A-Z]" "[a-z]") in
 	1|2|true)
 		echo "* warning: Some tests will not work if GIT_TRACE" \
diff --git a/transport-helper.c b/transport-helper.c
index f82297202..2638781c5 100644
--- a/transport-helper.c
+++ b/transport-helper.c
@@ -279,9 +279,8 @@ static void standard_options(struct transport *t)
 	char buf[16];
 	int n;
 	int v = t->verbose;
-	int no_progress = v < 0 || (!t->progress && !isatty(2));
 
-	set_helper_option(t, "progress", !no_progress ? "true" : "false");
+	set_helper_option(t, "progress", t->progress ? "true" : "false");
 
 	n = snprintf(buf, sizeof(buf), "%d", v + 1);
 	if (n >= sizeof(buf))
@@ -576,7 +575,6 @@ static int push_refs(struct transport *transport,
 	if (buf.len == 0)
 		return 0;
 
-	transport->verbose = flags & TRANSPORT_PUSH_VERBOSE ? 1 : 0;
 	standard_options(transport);
 
 	if (flags & TRANSPORT_PUSH_DRY_RUN) {
diff --git a/transport.c b/transport.c
index 08e4fa035..8ce39364a 100644
--- a/transport.c
+++ b/transport.c
@@ -526,7 +526,7 @@ static int fetch_refs_via_pack(struct transport *transport,
 	args.include_tag = data->options.followtags;
 	args.verbose = (transport->verbose > 0);
 	args.quiet = (transport->verbose < 0);
-	args.no_progress = args.quiet || (!transport->progress && !isatty(2));
+	args.no_progress = !transport->progress;
 	args.depth = data->options.depth;
 
 	for (i = 0; i < nr_heads; i++)
@@ -573,7 +573,7 @@ static int push_had_errors(struct ref *ref)
 	return 0;
 }
 
-static int refs_pushed(struct ref *ref)
+int transport_refs_pushed(struct ref *ref)
 {
 	for (; ref; ref = ref->next) {
 		switch(ref->status) {
@@ -587,7 +587,7 @@ static int refs_pushed(struct ref *ref)
 	return 0;
 }
 
-static void update_tracking_ref(struct remote *remote, struct ref *ref, int verbose)
+void transport_update_tracking_ref(struct remote *remote, struct ref *ref, int verbose)
 {
 	struct refspec rs;
 
@@ -609,8 +609,6 @@ static void update_tracking_ref(struct remote *remote, struct ref *ref, int verb
 	}
 }
 
-#define SUMMARY_WIDTH (2 * DEFAULT_ABBREV + 3)
-
 static void print_ref_status(char flag, const char *summary, struct ref *to, struct ref *from, const char *msg, int porcelain)
 {
 	if (porcelain) {
@@ -623,7 +621,7 @@ static void print_ref_status(char flag, const char *summary, struct ref *to, str
 		else
 			fprintf(stdout, "%s\n", summary);
 	} else {
-		fprintf(stderr, " %c %-*s ", flag, SUMMARY_WIDTH, summary);
+		fprintf(stderr, " %c %-*s ", flag, TRANSPORT_SUMMARY_WIDTH, summary);
 		if (from)
 			fprintf(stderr, "%s -> %s", prettify_refname(from->name), prettify_refname(to->name));
 		else
@@ -675,7 +673,7 @@ static void print_ok_ref_status(struct ref *ref, int porcelain)
 static int print_one_push_status(struct ref *ref, const char *dest, int count, int porcelain)
 {
 	if (!count)
-		fprintf(stderr, "To %s\n", dest);
+		fprintf(porcelain ? stdout : stderr, "To %s\n", dest);
 
 	switch(ref->status) {
 	case REF_STATUS_NONE:
@@ -711,8 +709,8 @@ static int print_one_push_status(struct ref *ref, const char *dest, int count, i
 	return 1;
 }
 
-static void print_push_status(const char *dest, struct ref *refs,
-			      int verbose, int porcelain, int * nonfastforward)
+void transport_print_push_status(const char *dest, struct ref *refs,
+				  int verbose, int porcelain, int *nonfastforward)
 {
 	struct ref *ref;
 	int n = 0;
@@ -738,7 +736,7 @@ static void print_push_status(const char *dest, struct ref *refs,
 	}
 }
 
-static void verify_remote_names(int nr_heads, const char **heads)
+void transport_verify_remote_names(int nr_heads, const char **heads)
 {
 	int i;
 
@@ -788,9 +786,10 @@ static int git_transport_push(struct transport *transport, struct ref *remote_re
 	args.send_mirror = !!(flags & TRANSPORT_PUSH_MIRROR);
 	args.force_update = !!(flags & TRANSPORT_PUSH_FORCE);
 	args.use_thin_pack = data->options.thin;
-	args.verbose = !!(flags & TRANSPORT_PUSH_VERBOSE);
-	args.quiet = !!(flags & TRANSPORT_PUSH_QUIET);
+	args.verbose = (transport->verbose > 0);
+	args.quiet = (transport->verbose < 0);
 	args.dry_run = !!(flags & TRANSPORT_PUSH_DRY_RUN);
+	args.porcelain = !!(flags & TRANSPORT_PUSH_PORCELAIN);
 
 	ret = send_pack(&args, data->fd, data->conn, remote_refs,
 			&data->extra_have);
@@ -872,6 +871,21 @@ static int is_file(const char *url)
 	return S_ISREG(buf.st_mode);
 }
 
+static int isurlschemechar(int first_flag, int ch)
+{
+	/*
+	 * The set of valid URL schemes, as per STD66 (RFC3986) is
+	 * '[A-Za-z][A-Za-z0-9+.-]*'. But use sightly looser check
+	 * of '[A-Za-z0-9][A-Za-z0-9+.-]*' because earlier version
+	 * of check used '[A-Za-z0-9]+' so not to break any remote
+	 * helpers.
+	 */
+	int alphanumeric, special;
+	alphanumeric = ch > 0 && isalnum(ch);
+	special = ch == '+' || ch == '-' || ch == '.';
+	return alphanumeric || (!first_flag && special);
+}
+
 static int is_url(const char *url)
 {
 	const char *url2, *first_slash;
@@ -896,7 +910,7 @@ static int is_url(const char *url)
 	 */
 	url2 = url;
 	while (url2 < first_slash - 1) {
-		if (!isalnum((unsigned char)*url2))
+		if (!isurlschemechar(url2 == url, (unsigned char)*url2))
 			return 0;
 		url2++;
 	}
@@ -915,6 +929,8 @@ struct transport *transport_get(struct remote *remote, const char *url)
 	const char *helper;
 	struct transport *ret = xcalloc(1, sizeof(*ret));
 
+	ret->progress = isatty(2);
+
 	if (!remote)
 		die("No remote provided to transport_get()");
 
@@ -930,7 +946,7 @@ struct transport *transport_get(struct remote *remote, const char *url)
 	if (url) {
 		const char *p = url;
 
-		while (isalnum(*p))
+		while (isurlschemechar(p == url, *p))
 			p++;
 		if (!prefixcmp(p, "::"))
 			helper = xstrndup(url, p - url);
@@ -1014,12 +1030,31 @@ int transport_set_option(struct transport *transport,
 	return 1;
 }
 
+void transport_set_verbosity(struct transport *transport, int verbosity,
+	int force_progress)
+{
+	if (verbosity >= 2)
+		transport->verbose = verbosity <= 3 ? verbosity : 3;
+	if (verbosity < 0)
+		transport->verbose = -1;
+
+	/**
+	 * Rules used to determine whether to report progress (processing aborts
+	 * when a rule is satisfied):
+	 *
+	 *   1. Report progress, if force_progress is 1 (ie. --progress).
+	 *   2. Don't report progress, if verbosity < 0 (ie. -q/--quiet ).
+	 *   3. Report progress if isatty(2) is 1.
+	 **/
+	transport->progress = force_progress || (verbosity >= 0 && isatty(2));
+}
+
 int transport_push(struct transport *transport,
 		   int refspec_nr, const char **refspec, int flags,
 		   int *nonfastforward)
 {
 	*nonfastforward = 0;
-	verify_remote_names(refspec_nr, refspec);
+	transport_verify_remote_names(refspec_nr, refspec);
 
 	if (transport->push) {
 		/* Maybe FIXME. But no important transport uses this case. */
@@ -1032,11 +1067,11 @@ int transport_push(struct transport *transport,
 			transport->get_refs_list(transport, 1);
 		struct ref *local_refs = get_local_heads();
 		int match_flags = MATCH_REFS_NONE;
-		int verbose = flags & TRANSPORT_PUSH_VERBOSE;
-		int quiet = flags & TRANSPORT_PUSH_QUIET;
+		int verbose = (transport->verbose > 0);
+		int quiet = (transport->verbose < 0);
 		int porcelain = flags & TRANSPORT_PUSH_PORCELAIN;
 		int pretend = flags & TRANSPORT_PUSH_DRY_RUN;
-		int ret, err;
+		int push_ret, ret, err;
 
 		if (flags & TRANSPORT_PUSH_ALL)
 			match_flags |= MATCH_REFS_ALL;
@@ -1052,13 +1087,12 @@ int transport_push(struct transport *transport,
 			flags & TRANSPORT_PUSH_MIRROR,
 			flags & TRANSPORT_PUSH_FORCE);
 
-		ret = transport->push_refs(transport, remote_refs, flags);
+		push_ret = transport->push_refs(transport, remote_refs, flags);
 		err = push_had_errors(remote_refs);
-
-		ret |= err;
+		ret = push_ret | err;
 
 		if (!quiet || err)
-			print_push_status(transport->url, remote_refs,
+			transport_print_push_status(transport->url, remote_refs,
 					verbose | porcelain, porcelain,
 					nonfastforward);
 
@@ -1068,11 +1102,14 @@ int transport_push(struct transport *transport,
 		if (!(flags & TRANSPORT_PUSH_DRY_RUN)) {
 			struct ref *ref;
 			for (ref = remote_refs; ref; ref = ref->next)
-				update_tracking_ref(transport->remote, ref, verbose);
+				transport_update_tracking_ref(transport->remote, ref, verbose);
 		}
 
-		if (!quiet && !ret && !refs_pushed(remote_refs))
+		if (porcelain && !push_ret)
+			puts("Done");
+		else if (!quiet && !ret && !transport_refs_pushed(remote_refs))
 			fprintf(stderr, "Everything up-to-date\n");
+
 		return ret;
 	}
 	return 1;
diff --git a/transport.h b/transport.h
index 6dd9ae182..c59d97388 100644
--- a/transport.h
+++ b/transport.h
@@ -80,7 +80,12 @@ struct transport {
 	int (*disconnect)(struct transport *connection);
 	char *pack_lockfile;
 	signed verbose : 3;
-	/* Force progress even if stderr is not a tty */
+	/**
+	 * Transports should not set this directly, and should use this
+	 * value without having to check isatty(2), -q/--quiet
+	 * (transport->verbose < 0), etc. - checking has already been done
+	 * in transport_set_verbosity().
+	 **/
 	unsigned progress : 1;
 	/*
 	 * If transport is at least potentially smart, this points to
@@ -94,10 +99,10 @@ struct transport {
 #define TRANSPORT_PUSH_FORCE 2
 #define TRANSPORT_PUSH_DRY_RUN 4
 #define TRANSPORT_PUSH_MIRROR 8
-#define TRANSPORT_PUSH_VERBOSE 16
-#define TRANSPORT_PUSH_PORCELAIN 32
-#define TRANSPORT_PUSH_QUIET 64
-#define TRANSPORT_PUSH_SET_UPSTREAM 128
+#define TRANSPORT_PUSH_PORCELAIN 16
+#define TRANSPORT_PUSH_SET_UPSTREAM 32
+
+#define TRANSPORT_SUMMARY_WIDTH (2 * DEFAULT_ABBREV + 3)
 
 /* Returns a transport suitable for the url */
 struct transport *transport_get(struct remote *, const char *);
@@ -128,6 +133,8 @@ struct transport *transport_get(struct remote *, const char *);
  **/
 int transport_set_option(struct transport *transport, const char *name,
 			 const char *value);
+void transport_set_verbosity(struct transport *transport, int verbosity,
+	int force_progress);
 
 int transport_push(struct transport *connection,
 		   int refspec_nr, const char **refspec, int flags,
@@ -148,4 +155,14 @@ int transport_connect(struct transport *transport, const char *name,
 /* Transport methods defined outside transport.c */
 int transport_helper_init(struct transport *transport, const char *name);
 
+/* common methods used by transport.c and builtin-send-pack.c */
+void transport_verify_remote_names(int nr_heads, const char **heads);
+
+void transport_update_tracking_ref(struct remote *remote, struct ref *ref, int verbose);
+
+int transport_refs_pushed(struct ref *ref);
+
+void transport_print_push_status(const char *dest, struct ref *refs,
+		  int verbose, int porcelain, int *nonfastforward);
+
 #endif
diff --git a/utf8.c b/utf8.c
index ab326ac83..84cfc72e6 100644
--- a/utf8.c
+++ b/utf8.c
@@ -280,22 +280,11 @@ int is_utf8(const char *text)
 	return 1;
 }
 
-static inline void strbuf_write(struct strbuf *sb, const char *buf, int len)
+static void strbuf_addchars(struct strbuf *sb, int c, size_t n)
 {
-	if (sb)
-		strbuf_insert(sb, sb->len, buf, len);
-	else
-		fwrite(buf, len, 1, stdout);
-}
-
-static void print_spaces(struct strbuf *buf, int count)
-{
-	static const char s[] = "                    ";
-	while (count >= sizeof(s)) {
-		strbuf_write(buf, s, sizeof(s) - 1);
-		count -= sizeof(s) - 1;
-	}
-	strbuf_write(buf, s, count);
+	strbuf_grow(sb, n);
+	memset(sb->buf + sb->len, c, n);
+	strbuf_setlen(sb, sb->len + n);
 }
 
 static void strbuf_add_indented_text(struct strbuf *buf, const char *text,
@@ -307,8 +296,8 @@ static void strbuf_add_indented_text(struct strbuf *buf, const char *text,
 		const char *eol = strchrnul(text, '\n');
 		if (*eol == '\n')
 			eol++;
-		print_spaces(buf, indent);
-		strbuf_write(buf, text, eol - text);
+		strbuf_addchars(buf, ' ', indent);
+		strbuf_add(buf, text, eol - text);
 		text = eol;
 		indent = indent2;
 	}
@@ -335,16 +324,21 @@ static size_t display_mode_esc_sequence_len(const char *s)
  * consumed (and no extra indent is necessary for the first line).
  */
 int strbuf_add_wrapped_text(struct strbuf *buf,
-		const char *text, int indent, int indent2, int width)
+		const char *text, int indent1, int indent2, int width)
 {
-	int w = indent, assume_utf8 = is_utf8(text);
-	const char *bol = text, *space = NULL;
+	int indent, w, assume_utf8 = 1;
+	const char *bol, *space, *start = text;
+	size_t orig_len = buf->len;
 
 	if (width <= 0) {
-		strbuf_add_indented_text(buf, text, indent, indent2);
+		strbuf_add_indented_text(buf, text, indent1, indent2);
 		return 1;
 	}
 
+retry:
+	bol = text;
+	w = indent = indent1;
+	space = NULL;
 	if (indent < 0) {
 		w = -indent;
 		space = text;
@@ -366,8 +360,8 @@ int strbuf_add_wrapped_text(struct strbuf *buf,
 				if (space)
 					start = space;
 				else
-					print_spaces(buf, indent);
-				strbuf_write(buf, start, text - start);
+					strbuf_addchars(buf, ' ', indent);
+				strbuf_add(buf, start, text - start);
 				if (!c)
 					return w;
 				space = text;
@@ -376,40 +370,41 @@ int strbuf_add_wrapped_text(struct strbuf *buf,
 				else if (c == '\n') {
 					space++;
 					if (*space == '\n') {
-						strbuf_write(buf, "\n", 1);
+						strbuf_addch(buf, '\n');
 						goto new_line;
 					}
 					else if (!isalnum(*space))
 						goto new_line;
 					else
-						strbuf_write(buf, " ", 1);
+						strbuf_addch(buf, ' ');
 				}
 				w++;
 				text++;
 			}
 			else {
 new_line:
-				strbuf_write(buf, "\n", 1);
+				strbuf_addch(buf, '\n');
 				text = bol = space + isspace(*space);
 				space = NULL;
 				w = indent = indent2;
 			}
 			continue;
 		}
-		if (assume_utf8)
+		if (assume_utf8) {
 			w += utf8_width(&text, NULL);
-		else {
+			if (!text) {
+				assume_utf8 = 0;
+				text = start;
+				strbuf_setlen(buf, orig_len);
+				goto retry;
+			}
+		} else {
 			w++;
 			text++;
 		}
 	}
 }
 
-int print_wrapped_text(const char *text, int indent, int indent2, int width)
-{
-	return strbuf_add_wrapped_text(NULL, text, indent, indent2, width);
-}
-
 int is_encoding_utf8(const char *name)
 {
 	if (!name)
diff --git a/utf8.h b/utf8.h
index c9738d83d..ebc4d2fa8 100644
--- a/utf8.h
+++ b/utf8.h
@@ -8,7 +8,6 @@ int utf8_strwidth(const char *string);
 int is_utf8(const char *text);
 int is_encoding_utf8(const char *name);
 
-int print_wrapped_text(const char *text, int indent, int indent2, int len);
 int strbuf_add_wrapped_text(struct strbuf *buf,
 		const char *text, int indent, int indent2, int width);
 
diff --git a/walker.h b/walker.h
index 8a149e110..95e576548 100644
--- a/walker.h
+++ b/walker.h
@@ -34,6 +34,6 @@ int walker_fetch(struct walker *impl, int targets, char **target,
 
 void walker_free(struct walker *walker);
 
-struct walker *get_http_walker(const char *url, struct remote *remote);
+struct walker *get_http_walker(const char *url);
 
 #endif /* WALKER_H */
diff --git a/wrap-for-bin.sh b/wrap-for-bin.sh
index c5075c9c6..09feb1f73 100644
--- a/wrap-for-bin.sh
+++ b/wrap-for-bin.sh
@@ -7,9 +7,15 @@
 # @@BUILD_DIR@@ and @@PROG@@.
 
 GIT_EXEC_PATH='@@BUILD_DIR@@'
-GIT_TEMPLATE_DIR='@@BUILD_DIR@@/templates/blt'
+if test -n "$NO_SET_GIT_TEMPLATE_DIR"
+then
+	unset GIT_TEMPLATE_DIR
+else
+	GIT_TEMPLATE_DIR='@@BUILD_DIR@@/templates/blt'
+	export GIT_TEMPLATE_DIR
+fi
 GITPERLLIB='@@BUILD_DIR@@/perl/blib/lib'
 PATH='@@BUILD_DIR@@/bin-wrappers:'"$PATH"
-export GIT_EXEC_PATH GIT_TEMPLATE_DIR GITPERLLIB PATH
+export GIT_EXEC_PATH GITPERLLIB PATH
 
 exec "${GIT_EXEC_PATH}/@@PROG@@" "$@"
diff --git a/wrapper.c b/wrapper.c
index 0e3e20a3f..9c71b2124 100644
--- a/wrapper.c
+++ b/wrapper.c
@@ -204,6 +204,16 @@ int xmkstemp(char *template)
 	return fd;
 }
 
+int xmkstemp_mode(char *template, int mode)
+{
+	int fd;
+
+	fd = git_mkstemp_mode(template, mode);
+	if (fd < 0)
+		die_errno("Unable to create temporary file");
+	return fd;
+}
+
 /*
  * zlib wrappers to make sure we don't silently miss errors
  * at init time.
@@ -267,10 +277,14 @@ int git_inflate(z_streamp strm, int flush)
 int odb_mkstemp(char *template, size_t limit, const char *pattern)
 {
 	int fd;
-
+	/*
+	 * we let the umask do its job, don't try to be more
+	 * restrictive except to remove write permission.
+	 */
+	int mode = 0444;
 	snprintf(template, limit, "%s/%s",
 		 get_object_directory(), pattern);
-	fd = mkstemp(template);
+	fd = git_mkstemp_mode(template, mode);
 	if (0 <= fd)
 		return fd;
 
@@ -279,7 +293,7 @@ int odb_mkstemp(char *template, size_t limit, const char *pattern)
 	snprintf(template, limit, "%s/%s",
 		 get_object_directory(), pattern);
 	safe_create_leading_directories(template);
-	return xmkstemp(template);
+	return xmkstemp_mode(template, mode);
 }
 
 int odb_pack_keep(char *name, size_t namesz, unsigned char *sha1)
diff --git a/xdiff-interface.c b/xdiff-interface.c
index 01f14fb50..ca5e3fbae 100644
--- a/xdiff-interface.c
+++ b/xdiff-interface.c
@@ -218,6 +218,23 @@ int read_mmfile(mmfile_t *ptr, const char *filename)
 	return 0;
 }
 
+void read_mmblob(mmfile_t *ptr, const unsigned char *sha1)
+{
+	unsigned long size;
+	enum object_type type;
+
+	if (!hashcmp(sha1, null_sha1)) {
+		ptr->ptr = xstrdup("");
+		ptr->size = 0;
+		return;
+	}
+
+	ptr->ptr = read_sha1_file(sha1, &type, &size);
+	if (!ptr->ptr || type != OBJ_BLOB)
+		die("unable to read blob object %s", sha1_to_hex(sha1));
+	ptr->size = size;
+}
+
 #define FIRST_FEW_BYTES 8000
 int buffer_is_binary(const char *ptr, unsigned long size)
 {
diff --git a/xdiff-interface.h b/xdiff-interface.h
index 55572c39a..abba70c16 100644
--- a/xdiff-interface.h
+++ b/xdiff-interface.h
@@ -18,6 +18,7 @@ int parse_hunk_header(char *line, int len,
 		      int *ob, int *on,
 		      int *nb, int *nn);
 int read_mmfile(mmfile_t *ptr, const char *filename);
+void read_mmblob(mmfile_t *ptr, const unsigned char *sha1);
 int buffer_is_binary(const char *ptr, unsigned long size);
 
 extern void xdiff_set_find_func(xdemitconf_t *xecfg, const char *line, int cflags);
diff --git a/xdiff/xdiff.h b/xdiff/xdiff.h
index 3f6229edb..a71763ade 100644
--- a/xdiff/xdiff.h
+++ b/xdiff/xdiff.h
@@ -56,17 +56,14 @@ extern "C" {
 #define XDL_MERGE_EAGER 1
 #define XDL_MERGE_ZEALOUS 2
 #define XDL_MERGE_ZEALOUS_ALNUM 3
-#define XDL_MERGE_LEVEL_MASK 0x0f
 
 /* merge favor modes */
 #define XDL_MERGE_FAVOR_OURS 1
 #define XDL_MERGE_FAVOR_THEIRS 2
-#define XDL_MERGE_FAVOR(flags) (((flags)>>4) & 3)
-#define XDL_MERGE_FLAGS(level, style, favor) ((level)|(style)|((favor)<<4))
+#define XDL_MERGE_FAVOR_UNION 3
 
 /* merge output styles */
-#define XDL_MERGE_DIFF3 0x8000
-#define XDL_MERGE_STYLE_MASK 0x8000
+#define XDL_MERGE_DIFF3 1
 
 typedef struct s_mmfile {
 	char *ptr;
@@ -117,13 +114,16 @@ int xdl_diff(mmfile_t *mf1, mmfile_t *mf2, xpparam_t const *xpp,
 typedef struct s_xmparam {
 	xpparam_t xpp;
 	int marker_size;
+	int level;
+	int favor;
+	int style;
 } xmparam_t;
 
 #define DEFAULT_CONFLICT_MARKER_SIZE 7
 
 int xdl_merge(mmfile_t *orig, mmfile_t *mf1, const char *name1,
 		mmfile_t *mf2, const char *name2,
-		xmparam_t const *xmp, int flags, mmbuffer_t *result);
+		xmparam_t const *xmp, mmbuffer_t *result);
 
 #ifdef __cplusplus
 }
diff --git a/xdiff/xmerge.c b/xdiff/xmerge.c
index 8cbe45e67..87cafa702 100644
--- a/xdiff/xmerge.c
+++ b/xdiff/xmerge.c
@@ -28,6 +28,7 @@ typedef struct s_xdmerge {
 	 * 0 = conflict,
 	 * 1 = no conflict, take first,
 	 * 2 = no conflict, take second.
+	 * 3 = no conflict, take both.
 	 */
 	int mode;
 	/*
@@ -230,14 +231,19 @@ static int xdl_fill_merge_buffer(xdfenv_t *xe1, const char *name1,
 			size = fill_conflict_hunk(xe1, name1, xe2, name2,
 						  size, i, style, m, dest,
 						  marker_size);
-		else if (m->mode == 1)
-			size += xdl_recs_copy(xe1, i, m->i1 + m->chg1 - i, 0,
+		else if (m->mode & 3) {
+			/* Before conflicting part */
+			size += xdl_recs_copy(xe1, i, m->i1 - i, 0,
 					      dest ? dest + size : NULL);
-		else if (m->mode == 2)
-			size += xdl_recs_copy(xe2, m->i2 - m->i1 + i,
-					      m->i1 + m->chg2 - i, 0,
-					      dest ? dest + size : NULL);
-		else
+			/* Postimage from side #1 */
+			if (m->mode & 1)
+				size += xdl_recs_copy(xe1, m->i1, m->chg1, 1,
+						      dest ? dest + size : NULL);
+			/* Postimage from side #2 */
+			if (m->mode & 2)
+				size += xdl_recs_copy(xe2, m->i2, m->chg2, 1,
+						      dest ? dest + size : NULL);
+		} else
 			continue;
 		i = m->i1 + m->chg1;
 	}
@@ -394,13 +400,13 @@ static int xdl_simplify_non_conflicts(xdfenv_t *xe1, xdmerge_t *m,
  */
 static int xdl_do_merge(xdfenv_t *xe1, xdchange_t *xscr1, const char *name1,
 		xdfenv_t *xe2, xdchange_t *xscr2, const char *name2,
-		int flags, xmparam_t const *xmp, mmbuffer_t *result) {
+		xmparam_t const *xmp, mmbuffer_t *result) {
 	xdmerge_t *changes, *c;
 	xpparam_t const *xpp = &xmp->xpp;
 	int i0, i1, i2, chg0, chg1, chg2;
-	int level = flags & XDL_MERGE_LEVEL_MASK;
-	int style = flags & XDL_MERGE_STYLE_MASK;
-	int favor = XDL_MERGE_FAVOR(flags);
+	int level = xmp->level;
+	int style = xmp->style;
+	int favor = xmp->favor;
 
 	if (style == XDL_MERGE_DIFF3) {
 		/*
@@ -550,7 +556,7 @@ static int xdl_do_merge(xdfenv_t *xe1, xdchange_t *xscr1, const char *name1,
 
 int xdl_merge(mmfile_t *orig, mmfile_t *mf1, const char *name1,
 		mmfile_t *mf2, const char *name2,
-		xmparam_t const *xmp, int flags, mmbuffer_t *result) {
+		xmparam_t const *xmp, mmbuffer_t *result) {
 	xdchange_t *xscr1, *xscr2;
 	xdfenv_t xe1, xe2;
 	int status;
@@ -587,7 +593,7 @@ int xdl_merge(mmfile_t *orig, mmfile_t *mf1, const char *name1,
 	} else {
 		status = xdl_do_merge(&xe1, xscr1, name1,
 				      &xe2, xscr2, name2,
-				      flags, xmp, result);
+				      xmp, result);
 	}
 	xdl_free_script(xscr1);
 	xdl_free_script(xscr2);