dev-lang/julia: version bump to 1.0.3

Package-Manager: Portage-2.3.54, Repoman-2.3.12
Signed-off-by: Matthias Maier <tamiko@gentoo.org>

3 files changed, 287 insertions, 0 deletions

diff --git a/dev-lang/julia/Manifest b/dev-lang/julia/Manifest
index 504424eb73b..b0c5dfe9bbf 100644
--- a/dev-lang/julia/Manifest
+++ b/dev-lang/julia/Manifest
@@ -2,6 +2,7 @@ DIST julia-0.6.3-bundled.tar.gz 2099258 BLAKE2B dea1f5d37477e0a612e3901d7d568e8c
 DIST julia-0.6.3.tar.gz 5542642 BLAKE2B cccd1ee2eb4d9f59382a0d1f6466e77c84b0542456c405c05b718bc8a39ff537a09760a523ee572fc9eee6797158aa00010fc4c931a80deac645fb1e45061c87 SHA512 f529bb30a17989234061cf4c3d87aecc6da720eb494efaca7be4ec1ed5eda60d440896fb76a45b6cb30205030256e7de765e8944f873b31d96f7c9ecac542db8
 DIST julia-0.7.0.tar.gz 7547849 BLAKE2B 6721e980a5fd84f1a28838a91acdd95e8562dd971903e30776dfb90a6cc0ac1ffbedd22c2bfee45bd2fa616adead82680ebe30f9b86a1d968db2353233b32bc2 SHA512 296dbc71fe5238b0cbdc5c67f7002fbf05abea85dc4298784d74fbfef1c96890ab9cc1bbe874337c01f39ca08a6022f6abcde3a5e2ff1cdc25f2f7493ead1804
 DIST julia-1.0.1.tar.gz 7382328 BLAKE2B 61ff64298f3740fb50a2cb9c5561e1d4594eea8edbecc4fde9771807be22f753b6c606a530eea9bf569aaccbb4c4a39664ba5d08793d8e127d0988cf7b0244f8 SHA512 41ca8c0280c4914e43f5a37ed09ce47174f991e3079703a705081265509d22cd6cb66a928dc1c41d473a3d8cc59bb6f74e25e3a960e828d6e469d85a8db58c18
+DIST julia-1.0.3.tar.gz 7460268 BLAKE2B d9d42e0235f249fa8c1ced12c659091b97d338ec4a4662ea13ea6a107cb59e90d8385c51962199e47dae5f9770156be2db2d8bb2e3cc8f42aa7403b4f4ca7f04 SHA512 b61399c7b7ffae828264a6ec916b409b2cbc6b3b98d9a6d39b60b014a97a1f1ad75e1ed4860d9ab15d1e5ffec691c04d1b797c238953290770b7313790ae3f1d
 DIST julia-dsfmt-2.2.3.tar.gz 291773 BLAKE2B 6ffae90494d72527920c80fc0fb005da1c7b84f8a03a7ecb0789434c0fff97359e5098e85431896dffccc7d5148c414e847aaba5feef648b8788421a466ff65e SHA512 6d8ddcd01aab3f9039f4f0288a8af53e290cc2f293ed8c4a8c9f3b3f12398e7eedfce8016117b425766ba89c61c86c13b3e420035b5f9bf91315b8b814c03662
 DIST julia-libuv-ed3700c849289ed01fe04273a7bf865340b2bd7e.tar.gz 1492695 BLAKE2B ad03512dd1db2c7066b46b5a3a314645b925481d8ace09ac0a0ae23cf5b8a64338ad457f8df229aa82f1d45605b5366883f563f2e22756ce28bb6fb7607d7124 SHA512 1305035b1372bdf234e3c5e673ee4c8ab5bda83ff06bc27704786def52667c3143fe587fca8f6e0855ba0c8b6d4dd90b2faefd33736224173f459d751885683e
 DIST julia-libwhich-81e9723c0273d78493dc8c8ed570f68d9ce7e89e.tar.gz 4183 BLAKE2B c932e23b1b476d3fd16cf6f451efd5fc6d9c1ec2c53e8ac086340a100817d9b30dae3eff50b284a42c09b2bbae30b9e2fd38b2881f8cbf4974a89f3bd0c87599 SHA512 6fb77b715d70d9bc95a8546c3bf97bd3677c7ea344b88bb5bc3bbfac9dceabe8a8cde7a0f64dec884cde802e4a3000e30837d3f824b5a9242348c4fe061526a3
diff --git a/dev-lang/julia/files/julia-1.0.3-fix_build_system.patch b/dev-lang/julia/files/julia-1.0.3-fix_build_system.patch
new file mode 100644
index 00000000000..98f4fc5c754
--- /dev/null
+++ b/dev-lang/julia/files/julia-1.0.3-fix_build_system.patch
@@ -0,0 +1,87 @@
+diff --git a/Make.inc b/Make.inc
+index e5c102f..c4c6640 100644
+--- a/Make.inc
++++ b/Make.inc
+@@ -181,7 +181,7 @@ USE_GPL_LIBS ?= 1
+ # Directories where said libraries get installed to
+ prefix ?= $(BUILDROOT)/julia-$(JULIA_COMMIT)
+ bindir := $(prefix)/bin
+-libdir := $(prefix)/lib
++libdir := $(prefix)/GENTOOLIBDIR
+ libexecdir := $(prefix)/libexec
+ datarootdir := $(prefix)/share
+ docdir := $(datarootdir)/doc/julia
+@@ -413,7 +413,7 @@ ifneq ($(OS), WINNT)
+ JCXXFLAGS += -pedantic
+ endif
+ DEBUGFLAGS := -O0 -ggdb2 -DJL_DEBUG_BUILD -fstack-protector-all
+-SHIPFLAGS := -O3 -ggdb2 -falign-functions
++SHIPFLAGS := GENTOOCFLAGS
+ endif
+ 
+ ifeq ($(USECLANG),1)
+@@ -424,7 +424,7 @@ JCFLAGS := -pipe $(fPIC) -fno-strict-aliasing -D_FILE_OFFSET_BITS=64
+ JCPPFLAGS := -fasynchronous-unwind-tables
+ JCXXFLAGS := -pipe $(fPIC) -fno-rtti -pedantic
+ DEBUGFLAGS := -O0 -g -DJL_DEBUG_BUILD -fstack-protector-all
+-SHIPFLAGS := -O3 -g
++SHIPFLAGS := GENTOOCFLAGS
+ ifeq ($(OS), Darwin)
+ ifeq ($(USE_LIBCPP), 1)
+ MACOSX_VERSION_MIN := 10.8
+@@ -453,7 +453,7 @@ JCFLAGS := -std=gnu11 -pipe $(fPIC) -fno-strict-aliasing -D_FILE_OFFSET_BITS=64
+ JCPPFLAGS :=
+ JCXXFLAGS := -pipe $(fPIC) -fno-rtti
+ DEBUGFLAGS := -O0 -g -DJL_DEBUG_BUILD -fstack-protector-all
+-SHIPFLAGS := -O3 -g -falign-functions
++SHIPFLAGS := GENTOOCFLAGS
+ endif
+ 
+ ifeq ($(USECCACHE), 1)
+diff --git a/base/Makefile b/base/Makefile
+index 21c7ad4..737e40d 100644
+--- a/base/Makefile
++++ b/base/Makefile
+@@ -207,7 +207,6 @@ $(build_private_libdir)/libLLVM.dylib:
+ 	ln -sf "$$REALPATH" "$@"
+ ifneq ($(USE_SYSTEM_LLVM),0)
+ ifneq ($(USE_LLVM_SHLIB),0)
+-SYMLINK_SYSTEM_LIBRARIES += symlink_libLLVM
+ endif
+ endif
+ 
+diff --git a/doc/Makefile b/doc/Makefile
+index 3d07733..8bd3bc0 100644
+--- a/doc/Makefile
++++ b/doc/Makefile
+@@ -29,7 +29,7 @@ deps: UnicodeData.txt
+ 	$(JLCHECKSUM) UnicodeData.txt
+ 
+ clean:
+-	-rm -rf _build/* deps/* docbuild.log UnicodeData.txt
++	@echo "Do not clean doc/_build/html. Just use it..."
+ 
+ cleanall: clean
+ 
+diff --git a/src/Makefile b/src/Makefile
+index 20da34d..84eae21 100644
+--- a/src/Makefile
++++ b/src/Makefile
+@@ -88,16 +88,7 @@ UV_HEADERS += uv/*.h
+ endif
+ PUBLIC_HEADER_TARGETS := $(addprefix $(build_includedir)/julia/,$(notdir $(PUBLIC_HEADERS)) $(UV_HEADERS))
+ 
+-ifeq ($(JULIACODEGEN),LLVM)
+-# In LLVM < 3.4, --ldflags includes both options and libraries, so use it both before and after --libs
+-# In LLVM >= 3.4, --ldflags has only options, and --system-libs has the libraries.
+-ifneq ($(USE_LLVM_SHLIB),1)
+-LLVMLINK += $(shell $(LLVM_CONFIG_HOST) --ldflags) $(shell $(LLVM_CONFIG_HOST) --libs $(LLVM_LIBS)) $(shell $(LLVM_CONFIG_HOST) --ldflags) $(shell $(LLVM_CONFIG_HOST) --system-libs 2> /dev/null)
+-else
+-LLVMLINK += $(shell $(LLVM_CONFIG_HOST) --ldflags) -lLLVM
+-FLAGS += -DLLVM_SHLIB
+-endif # USE_LLVM_SHLIB == 1
+-endif
++LLVMLINK = $(call exec,$(LLVM_CONFIG) --ldflags) $(call exec,$(LLVM_CONFIG) --libs) $(call exec,$(LLVM_CONFIG) --ldflags) $(call exec,$(LLVM_CONFIG) --system-libs)
+ 
+ COMMON_LIBS := -L$(build_shlibdir) -L$(build_libdir) $(LIBUV) $(LIBUTF8PROC) $(NO_WHOLE_ARCHIVE) $(LLVMLINK) $(OSLIBS)
+ DEBUG_LIBS := $(WHOLE_ARCHIVE) $(BUILDDIR)/flisp/libflisp-debug.a $(WHOLE_ARCHIVE) $(BUILDDIR)/support/libsupport-debug.a $(COMMON_LIBS)
diff --git a/dev-lang/julia/julia-1.0.3.ebuild b/dev-lang/julia/julia-1.0.3.ebuild
new file mode 100644
index 00000000000..1194c900964
--- /dev/null
+++ b/dev-lang/julia/julia-1.0.3.ebuild
@@ -0,0 +1,199 @@
+# Copyright 1999-2019 Gentoo Authors
+# Distributed under the terms of the GNU General Public License v2
+
+EAPI=6
+
+RESTRICT="test"
+
+inherit llvm pax-utils toolchain-funcs
+
+MY_LIBUV_V="ed3700c849289ed01fe04273a7bf865340b2bd7e"
+MY_UTF8PROC_V="97ef668b312b96382714dbb8eaac4affce0816e6"
+MY_LIBWHICH_V="81e9723c0273d78493dc8c8ed570f68d9ce7e89e"
+MY_DSFMT_V="2.2.3"
+
+DESCRIPTION="High-performance programming language for technical computing"
+HOMEPAGE="https://julialang.org/"
+SRC_URI="
+	https://github.com/JuliaLang/${PN}/releases/download/v${PV}/${P}.tar.gz
+	https://api.github.com/repos/JuliaLang/libuv/tarball/${MY_LIBUV_V} -> ${PN}-libuv-${MY_LIBUV_V}.tar.gz
+	https://api.github.com/repos/JuliaLang/utf8proc/tarball/${MY_UTF8PROC_V} -> ${PN}-utf8proc-${MY_UTF8PROC_V}.tar.gz
+	https://api.github.com/repos/vtjnash/libwhich/tarball/${MY_LIBWHICH_V} -> ${PN}-libwhich-${MY_LIBWHICH_V}.tar.gz
+	http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-${MY_DSFMT_V}.tar.gz -> ${PN}-dsfmt-${MY_DSFMT_V}.tar.gz
+"
+
+LICENSE="MIT"
+SLOT="0"
+KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+IUSE=""
+
+# julia 0.7* needs a patched llvm-6
+RDEPEND="
+	=sys-devel/llvm-6*:=
+	=sys-devel/clang-6*:="
+LLVM_MAX_SLOT=6
+
+RDEPEND+="
+	dev-libs/double-conversion:0=
+	dev-libs/gmp:0=
+	dev-libs/libgit2:0=
+	>=dev-libs/libpcre2-10.23:0=[jit]
+	dev-libs/mpfr:0=
+	dev-libs/openspecfun
+	sci-libs/amd:0=
+	sci-libs/arpack:0=
+	sci-libs/camd:0=
+	sci-libs/ccolamd:0=
+	sci-libs/cholmod:0=
+	sci-libs/colamd:0=
+	sci-libs/fftw:3.0=[threads]
+	sci-libs/openlibm:0=
+	sci-libs/spqr:0=
+	sci-libs/umfpack:0=
+	sci-mathematics/glpk:0=
+	>=sys-libs/libunwind-1.1:7=
+	sys-libs/readline:0=
+	sys-libs/zlib:0=
+	>=virtual/blas-3.6
+	virtual/lapack"
+
+DEPEND="${RDEPEND}
+	dev-vcs/git
+	dev-util/patchelf
+	virtual/pkgconfig"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-1.0.3-fix_build_system.patch
+)
+
+src_unpack() {
+	tounpack=(${A})
+	# the main source tree, followed by deps
+	unpack "${A/%\ */}"
+
+	mkdir -p "${S}/deps/srccache/"
+	for i in "${tounpack[@]:1}"; do
+		cp "${DISTDIR}/${i}" "${S}/deps/srccache/${i#julia-}" || die
+	done
+}
+
+src_prepare() {
+	default
+
+	# Sledgehammer:
+	# - prevent fetching of bundled stuff in compile and install phase
+	# - respect CFLAGS
+	# - respect EPREFIX and Gentoo specific paths
+	# - fix BLAS and LAPACK link interface
+
+	sed -i \
+		-e 's|git submodule|${EPREFIX}/bin/true|g' \
+		-e "s|GENTOOCFLAGS|${CFLAGS}|g" \
+		-e "s|/usr/include|${EPREFIX%/}/usr/include|g" \
+		deps/Makefile || die
+
+	local libblas="$($(tc-getPKG_CONFIG) --libs-only-l blas)"
+	libblas="${libblas%% *}"
+	libblas="lib${libblas#-l}"
+	local liblapack="$($(tc-getPKG_CONFIG) --libs-only-l lapack)"
+	liblapack="${liblapack%% *}"
+	liblapack="lib${liblapack#-l}"
+
+	sed -i \
+		-e "s|GENTOOCFLAGS|${CFLAGS}|g" \
+		-e "s|GENTOOLIBDIR|$(get_libdir)|" \
+		-e "s|^JULIA_COMMIT = .*|JULIA_COMMIT = v${PV}|" \
+		-e "s|-lblas|$($(tc-getPKG_CONFIG) --libs blas)|" \
+		-e "s|= libblas|= ${libblas}|" \
+		-e "s|-llapack|$($(tc-getPKG_CONFIG) --libs lapack)|" \
+		-e "s|= liblapack|= ${liblapack}|" \
+		Make.inc || die
+
+	sed -i \
+		-e "s|,lib)|,$(get_libdir))|g" \
+		-e "s|\$(BUILD)/lib|\$(BUILD)/$(get_libdir)|g" \
+		Makefile || die
+
+	sed -i \
+		-e "s|ar -rcs|$(tc-getAR) -rcs|g" \
+		src/Makefile || die
+
+	# disable doc install starting  git fetching
+	sed -i -e 's~install: $(build_depsbindir)/stringreplace $(BUILDROOT)/doc/_build/html/en/index.html~install: $(build_depsbindir)/stringreplace~' Makefile || die
+}
+
+src_configure() {
+	# julia does not play well with the system versions of dsfmt, libuv,
+	# and utf8proc
+
+	# USE_SYSTEM_LIBM=0 implies using external openlibm
+	cat <<-EOF > Make.user
+		USE_SYSTEM_ARPACK:=1
+		USE_SYSTEM_BLAS:=1
+		USE_SYSTEM_DSFMT:=0
+		USE_SYSTEM_GMP:=1
+		USE_SYSTEM_GRISU:=1
+		USE_SYSTEM_LAPACK:=1
+		USE_SYSTEM_LIBGIT2:=1
+		USE_SYSTEM_LIBM:=0
+		USE_SYSTEM_LIBUNWIND:=1
+		USE_SYSTEM_LIBUV:=0
+		USE_SYSTEM_LLVM:=1
+		USE_LLVM_SHLIB:=1
+		USE_SYSTEM_MPFR:=1
+		USE_SYSTEM_OPENLIBM:=1
+		USE_SYSTEM_OPENSPECFUN:=1
+		USE_SYSTEM_PATCHELF:=1
+		USE_SYSTEM_PCRE:=1
+		USE_SYSTEM_READLINE:=1
+		USE_SYSTEM_RMATH:=0
+		USE_SYSTEM_SUITESPARSE:=1
+		USE_SYSTEM_UTF8PROC:=0
+		USE_SYSTEM_ZLIB=1
+		VERBOSE=1
+		libdir="${EROOT}/usr/$(get_libdir)"
+	EOF
+
+}
+
+src_compile() {
+
+	# Julia accesses /proc/self/mem on Linux
+	addpredict /proc/self/mem
+
+	emake cleanall
+	emake julia-release \
+		prefix="${EPREFIX}/usr" DESTDIR="${D}" \
+		CC="$(tc-getCC)" CXX="$(tc-getCXX)"
+	pax-mark m $(file usr/bin/julia-* | awk -F : '/ELF/ {print $1}')
+	emake
+}
+
+src_test() {
+	emake test
+}
+
+src_install() {
+	# Julia is special. It tries to find a valid git repository (that would
+	# normally be cloned during compilation/installation). Just make it
+	# happy...
+	git init && \
+		git config --local user.email "whatyoudoing@example.com" && \
+		git config --local user.name "Whyyyyyy" && \
+		git commit -a --allow-empty -m "initial" || die "git failed"
+
+	emake install \
+		prefix="${EPREFIX}/usr" DESTDIR="${D}" \
+		CC="$(tc-getCC)" CXX="$(tc-getCXX)"
+	cat > 99julia <<-EOF
+		LDPATH=${EROOT%/}/usr/$(get_libdir)/julia
+	EOF
+	doenvd 99julia
+
+	dodoc README.md
+
+	mv "${ED}"/usr/etc/julia "${ED}"/etc || die
+	rmdir "${ED}"/usr/etc || die
+	mv "${ED}"/usr/share/doc/julia/html "${ED}"/usr/share/doc/${PF} || die
+	rmdir "${ED}"/usr/share/doc/julia || die
+}