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| author | Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 13:49:04 -0700 |
|---|---|---|
| committer | Robin H. Johnson <robbat2@gentoo.org> | 2015-08-08 17:38:18 -0700 |
| commit | 56bd759df1d0c750a065b8c845e93d5dfa6b549d (patch) | |
| tree | 3f91093cdb475e565ae857f1c5a7fd339e2d781e /sci-biology/lagan/files/lagan-2.0-gcc4.3.patch | |
| download | gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.gz gentoo-56bd759df1d0c750a065b8c845e93d5dfa6b549d.tar.xz | |
proj/gentoo: Initial commit
This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.
This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.
Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.
Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed
Diffstat (limited to 'sci-biology/lagan/files/lagan-2.0-gcc4.3.patch')
| -rw-r--r-- | sci-biology/lagan/files/lagan-2.0-gcc4.3.patch | 23 |
1 files changed, 23 insertions, 0 deletions
diff --git a/sci-biology/lagan/files/lagan-2.0-gcc4.3.patch b/sci-biology/lagan/files/lagan-2.0-gcc4.3.patch new file mode 100644 index 00000000000..a4b1d6808e2 --- /dev/null +++ b/sci-biology/lagan/files/lagan-2.0-gcc4.3.patch @@ -0,0 +1,23 @@ +diff -durr lagan20-orig/src/glocal/score.cpp lagan20/src/glocal/score.cpp +--- lagan20-orig/src/glocal/score.cpp 2009-02-04 15:25:57.698333297 +0000 ++++ lagan20/src/glocal/score.cpp 2009-02-04 15:27:23.894092890 +0000 +@@ -2,7 +2,7 @@ + #include<score.h> + #include<leftinfluence.h> + #include<rightinfluence.h> +-#include<fstream.h> ++#include<fstream> + + extern vector<class Score*> scoreFunctions[1<<(UPSTRANDBITS+DOWNSTRANDBITS+RELPOSBITS)]; + +diff -durr lagan20-orig/src/utils/Glue.cpp lagan20/src/utils/Glue.cpp +--- lagan20-orig/src/utils/Glue.cpp 2009-02-04 15:25:57.702333182 +0000 ++++ lagan20/src/utils/Glue.cpp 2009-02-04 15:27:04.190822654 +0000 +@@ -1,6 +1,7 @@ + #include "MultiSequence.h" + #include "SafeVector.h" + #include "Output.h" ++#include <string.h> + #include <math.h> + #include <assert.h> + #include <fstream> |