diff options
| author | Michał Górny <mgorny@gentoo.org> | 2016-01-24 23:32:36 +0100 |
|---|---|---|
| committer | Michał Górny <mgorny@gentoo.org> | 2016-01-24 23:58:38 +0100 |
| commit | cfd93d768e79a349f1e762b92773190295c36980 (patch) | |
| tree | 2239eb163651fea5371739f3e415bc11793ec557 /sci-biology | |
| parent | 54abd8ef454d94e71828d9841d045b8c58a58987 (diff) | |
| download | gentoo-cfd93d768e79a349f1e762b92773190295c36980.tar.gz gentoo-cfd93d768e79a349f1e762b92773190295c36980.tar.xz | |
Replace all herds with appropriate projects (GLEP 67)
Replace all uses of herd with appropriate project maintainers, or no
maintainers in case of herds requested to be disbanded.
Diffstat (limited to 'sci-biology')
150 files changed, 612 insertions, 153 deletions
diff --git a/sci-biology/GBrowse/metadata.xml b/sci-biology/GBrowse/metadata.xml index 32b15c723f9..dd5b8c1f252 100644 --- a/sci-biology/GBrowse/metadata.xml +++ b/sci-biology/GBrowse/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> <upstream> <remote-id type="cpan">GBrowse</remote-id> </upstream> diff --git a/sci-biology/aaindex/metadata.xml b/sci-biology/aaindex/metadata.xml index ccb567e64e0..0b81292dee8 100644 --- a/sci-biology/aaindex/metadata.xml +++ b/sci-biology/aaindex/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Amino acid indices and similarity matrices maintained at Kyoto University. An amino acid index is a set of 20 numerical values diff --git a/sci-biology/abyss/metadata.xml b/sci-biology/abyss/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/abyss/metadata.xml +++ b/sci-biology/abyss/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/allpathslg/metadata.xml b/sci-biology/allpathslg/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/allpathslg/metadata.xml +++ b/sci-biology/allpathslg/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/amap/metadata.xml b/sci-biology/amap/metadata.xml index 34294c65ca0..33fe2f0e7ca 100644 --- a/sci-biology/amap/metadata.xml +++ b/sci-biology/amap/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> </pkgmetadata> diff --git a/sci-biology/amos/metadata.xml b/sci-biology/amos/metadata.xml index a73ee9189a9..fb346f5febd 100644 --- a/sci-biology/amos/metadata.xml +++ b/sci-biology/amos/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">amos</remote-id> </upstream> diff --git a/sci-biology/arb/metadata.xml b/sci-biology/arb/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/arb/metadata.xml +++ b/sci-biology/arb/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ariadne/metadata.xml b/sci-biology/ariadne/metadata.xml index 3e55c00f9d7..5abaffad62e 100644 --- a/sci-biology/ariadne/metadata.xml +++ b/sci-biology/ariadne/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> ARIADNE is a package of two programs, ariadne and prospero, that compare protein sequences and profiles using the Smith-Waterman diff --git a/sci-biology/augustus/metadata.xml b/sci-biology/augustus/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/augustus/metadata.xml +++ b/sci-biology/augustus/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bamtools/metadata.xml b/sci-biology/bamtools/metadata.xml index f2c00c1fdd0..77ef447510c 100644 --- a/sci-biology/bamtools/metadata.xml +++ b/sci-biology/bamtools/metadata.xml @@ -1,12 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>proxy-maintainers</herd> <maintainer> <email>mmokrejs@gmail.com</email> <name>Martin Mokrejs</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer> + <email>proxy-maint@gentoo.org</email> + <name>Proxy Maintainers</name> + </maintainer> <longdescription>BAM (Binary Alignment/Map) format is useful for storing large DNA sequence alignments. It is closely related to the text-based SAM format, but optimized for random-access. BamTools provides a fast, flexible C++ API for reading and writing BAM files.</longdescription> <upstream> <remote-id type="github">pezmaster31/bamtools</remote-id> diff --git a/sci-biology/beast-mcmc/metadata.xml b/sci-biology/beast-mcmc/metadata.xml index 7764bf07c82..90166c061e0 100644 --- a/sci-biology/beast-mcmc/metadata.xml +++ b/sci-biology/beast-mcmc/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="github">beast-dev/beast-mcmc</remote-id> </upstream> diff --git a/sci-biology/bedtools/metadata.xml b/sci-biology/bedtools/metadata.xml index 6edffa4a6dc..7cdbc1cb1bf 100644 --- a/sci-biology/bedtools/metadata.xml +++ b/sci-biology/bedtools/metadata.xml @@ -1,12 +1,18 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>proxy-maintainers</herd> <maintainer> <email>mmokrejs@gmail.com</email> <name>Martin Mokrejs</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> + <maintainer> + <email>proxy-maint@gentoo.org</email> + <name>Proxy Maintainers</name> + </maintainer> <longdescription> BEDTools: a flexible suite of utilities for comparing genomic features. </longdescription> diff --git a/sci-biology/bfast/metadata.xml b/sci-biology/bfast/metadata.xml index 45107864e21..6b84fb0e72b 100644 --- a/sci-biology/bfast/metadata.xml +++ b/sci-biology/bfast/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bfast</remote-id> </upstream> diff --git a/sci-biology/biogrep/metadata.xml b/sci-biology/biogrep/metadata.xml index d4648212cba..71d4974b6dd 100644 --- a/sci-biology/biogrep/metadata.xml +++ b/sci-biology/biogrep/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biojava/metadata.xml b/sci-biology/biojava/metadata.xml index 0a18364544e..fd50d98599d 100644 --- a/sci-biology/biojava/metadata.xml +++ b/sci-biology/biojava/metadata.xml @@ -1,6 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> - <herd>java</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> +<maintainer> + <email>java@gentoo.org</email> + <name>Java</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biopandas/metadata.xml b/sci-biology/biopandas/metadata.xml index c2ee060b99b..8b559490c96 100644 --- a/sci-biology/biopandas/metadata.xml +++ b/sci-biology/biopandas/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="pypi">BioPandas</remote-id> <maintainer status="unknown"> diff --git a/sci-biology/bioperl-db/metadata.xml b/sci-biology/bioperl-db/metadata.xml index 642468c809b..c175ecb3d49 100644 --- a/sci-biology/bioperl-db/metadata.xml +++ b/sci-biology/bioperl-db/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-DB</remote-id> </upstream> diff --git a/sci-biology/bioperl-network/metadata.xml b/sci-biology/bioperl-network/metadata.xml index 045af7cc614..3102a015538 100644 --- a/sci-biology/bioperl-network/metadata.xml +++ b/sci-biology/bioperl-network/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-Network</remote-id> </upstream> diff --git a/sci-biology/bioperl-run/metadata.xml b/sci-biology/bioperl-run/metadata.xml index f8c7078a281..09980b2cce9 100644 --- a/sci-biology/bioperl-run/metadata.xml +++ b/sci-biology/bioperl-run/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="cpan">BioPerl-Run</remote-id> </upstream> diff --git a/sci-biology/bioperl/metadata.xml b/sci-biology/bioperl/metadata.xml index 210ba364d45..aeed8448672 100644 --- a/sci-biology/bioperl/metadata.xml +++ b/sci-biology/bioperl/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="run">Install sci-biology/bioperl-run</flag> <flag name="network">Install sci-biology/bioperl-run</flag> diff --git a/sci-biology/biopython/metadata.xml b/sci-biology/biopython/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/biopython/metadata.xml +++ b/sci-biology/biopython/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bioruby/metadata.xml b/sci-biology/bioruby/metadata.xml index d4648212cba..71d4974b6dd 100644 --- a/sci-biology/bioruby/metadata.xml +++ b/sci-biology/bioruby/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/biosql/metadata.xml b/sci-biology/biosql/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/biosql/metadata.xml +++ b/sci-biology/biosql/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blat/metadata.xml b/sci-biology/blat/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/blat/metadata.xml +++ b/sci-biology/blat/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/blossoc/metadata.xml b/sci-biology/blossoc/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/blossoc/metadata.xml +++ b/sci-biology/blossoc/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/bowtie/metadata.xml b/sci-biology/bowtie/metadata.xml index 6e56af71b3d..8654e51c64f 100644 --- a/sci-biology/bowtie/metadata.xml +++ b/sci-biology/bowtie/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bowtie-bio</remote-id> </upstream> diff --git a/sci-biology/bwa/metadata.xml b/sci-biology/bwa/metadata.xml index 97a33fbf5c4..f32466d551c 100644 --- a/sci-biology/bwa/metadata.xml +++ b/sci-biology/bwa/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">bio-bwa</remote-id> </upstream> diff --git a/sci-biology/cd-hit/metadata.xml b/sci-biology/cd-hit/metadata.xml index bd5607ab16b..2fad5f23ef8 100644 --- a/sci-biology/cd-hit/metadata.xml +++ b/sci-biology/cd-hit/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> CD-HIT is a very widely used program for clustering and comparing large sets of protein or nucleotide sequences. CD-HIT is very fast and can handle diff --git a/sci-biology/clustal-omega/metadata.xml b/sci-biology/clustal-omega/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/clustal-omega/metadata.xml +++ b/sci-biology/clustal-omega/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clustalw-mpi/metadata.xml b/sci-biology/clustalw-mpi/metadata.xml index ab9706172a6..77328aff54c 100644 --- a/sci-biology/clustalw-mpi/metadata.xml +++ b/sci-biology/clustalw-mpi/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> <use> <flag name="mpi_njtree">Use MPI (as opposed to serial) code for computing neighbor-joining trees</flag> diff --git a/sci-biology/clustalw/metadata.xml b/sci-biology/clustalw/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/clustalw/metadata.xml +++ b/sci-biology/clustalw/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/clustalx/metadata.xml b/sci-biology/clustalx/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/clustalx/metadata.xml +++ b/sci-biology/clustalx/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/consed/metadata.xml b/sci-biology/consed/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/consed/metadata.xml +++ b/sci-biology/consed/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cufflinks/metadata.xml b/sci-biology/cufflinks/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/cufflinks/metadata.xml +++ b/sci-biology/cufflinks/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/cutg/metadata.xml b/sci-biology/cutg/metadata.xml index 59b110912ca..bd81d3edcae 100644 --- a/sci-biology/cutg/metadata.xml +++ b/sci-biology/cutg/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Codon usage tables maintained at the Kazusa DNA Research Institute. Codon usage in individual genes has been calculated using the diff --git a/sci-biology/dialign-tx/metadata.xml b/sci-biology/dialign-tx/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/dialign-tx/metadata.xml +++ b/sci-biology/dialign-tx/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/dialign2/metadata.xml b/sci-biology/dialign2/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/dialign2/metadata.xml +++ b/sci-biology/dialign2/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/diya/metadata.xml b/sci-biology/diya/metadata.xml index d6b9de8b20a..244e2acd045 100644 --- a/sci-biology/diya/metadata.xml +++ b/sci-biology/diya/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">diyg</remote-id> </upstream> diff --git a/sci-biology/elph/metadata.xml b/sci-biology/elph/metadata.xml index 469879ba8f5..3267c1d4d44 100644 --- a/sci-biology/elph/metadata.xml +++ b/sci-biology/elph/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> ELPH is a general-purpose Gibbs sampler for finding motifs in a set of DNA or protein sequences. The program takes as input a set containing diff --git a/sci-biology/embassy-cbstools/metadata.xml b/sci-biology/embassy-cbstools/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-cbstools/metadata.xml +++ b/sci-biology/embassy-cbstools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-clustalomega/metadata.xml b/sci-biology/embassy-clustalomega/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-clustalomega/metadata.xml +++ b/sci-biology/embassy-clustalomega/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domainatrix/metadata.xml b/sci-biology/embassy-domainatrix/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-domainatrix/metadata.xml +++ b/sci-biology/embassy-domainatrix/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domalign/metadata.xml b/sci-biology/embassy-domalign/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-domalign/metadata.xml +++ b/sci-biology/embassy-domalign/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-domsearch/metadata.xml b/sci-biology/embassy-domsearch/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-domsearch/metadata.xml +++ b/sci-biology/embassy-domsearch/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-emnu/metadata.xml b/sci-biology/embassy-emnu/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-emnu/metadata.xml +++ b/sci-biology/embassy-emnu/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-esim4/metadata.xml b/sci-biology/embassy-esim4/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-esim4/metadata.xml +++ b/sci-biology/embassy-esim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-hmmer/metadata.xml b/sci-biology/embassy-hmmer/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-hmmer/metadata.xml +++ b/sci-biology/embassy-hmmer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-iprscan/metadata.xml b/sci-biology/embassy-iprscan/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-iprscan/metadata.xml +++ b/sci-biology/embassy-iprscan/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-meme/metadata.xml b/sci-biology/embassy-meme/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-meme/metadata.xml +++ b/sci-biology/embassy-meme/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-mse/metadata.xml b/sci-biology/embassy-mse/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-mse/metadata.xml +++ b/sci-biology/embassy-mse/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-phylipnew/metadata.xml b/sci-biology/embassy-phylipnew/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-phylipnew/metadata.xml +++ b/sci-biology/embassy-phylipnew/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-signature/metadata.xml b/sci-biology/embassy-signature/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-signature/metadata.xml +++ b/sci-biology/embassy-signature/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-structure/metadata.xml b/sci-biology/embassy-structure/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-structure/metadata.xml +++ b/sci-biology/embassy-structure/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-topo/metadata.xml b/sci-biology/embassy-topo/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-topo/metadata.xml +++ b/sci-biology/embassy-topo/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy-vienna/metadata.xml b/sci-biology/embassy-vienna/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy-vienna/metadata.xml +++ b/sci-biology/embassy-vienna/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/embassy/metadata.xml b/sci-biology/embassy/metadata.xml index fbd4705346b..e83d435707c 100644 --- a/sci-biology/embassy/metadata.xml +++ b/sci-biology/embassy/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">emboss</remote-id> </upstream> diff --git a/sci-biology/emboss/metadata.xml b/sci-biology/emboss/metadata.xml index 8d209e2d5d8..c94784a8eb0 100644 --- a/sci-biology/emboss/metadata.xml +++ b/sci-biology/emboss/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> EMBOSS is "The European Molecular Biology Open Software Suite". EMBOSS is a free Open Source software analysis package specially diff --git a/sci-biology/eugene/metadata.xml b/sci-biology/eugene/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/eugene/metadata.xml +++ b/sci-biology/eugene/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/exonerate/metadata.xml b/sci-biology/exonerate/metadata.xml index 711d805d77e..6258e1d8b53 100644 --- a/sci-biology/exonerate/metadata.xml +++ b/sci-biology/exonerate/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> exonerate is a generic tool for pairwise sequence comparison </longdescription> diff --git a/sci-biology/express/metadata.xml b/sci-biology/express/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/express/metadata.xml +++ b/sci-biology/express/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/fasta/metadata.xml b/sci-biology/fasta/metadata.xml index b98c9919d24..eb1406f7765 100644 --- a/sci-biology/fasta/metadata.xml +++ b/sci-biology/fasta/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> </longdescription> </pkgmetadata> diff --git a/sci-biology/fasttree/metadata.xml b/sci-biology/fasttree/metadata.xml index 5ee1f51e55d..0c1572eed0f 100644 --- a/sci-biology/fasttree/metadata.xml +++ b/sci-biology/fasttree/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="double-precision"> use double precision instead of single-precision floating point diff --git a/sci-biology/finchtv/metadata.xml b/sci-biology/finchtv/metadata.xml index e487463fc00..53f5683fb44 100644 --- a/sci-biology/finchtv/metadata.xml +++ b/sci-biology/finchtv/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>je_fro@gentoo.org</email> <name>Jeff Gardner</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> A cross-platform graphical viewer for chromatogram files. </longdescription> diff --git a/sci-biology/foldingathome/metadata.xml b/sci-biology/foldingathome/metadata.xml index 63d767b84f6..93760f0c050 100644 --- a/sci-biology/foldingathome/metadata.xml +++ b/sci-biology/foldingathome/metadata.xml @@ -1,9 +1,12 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> -<herd>sci-biology</herd> <maintainer> <email>axs@gentoo.org</email> <name>Ian Stakenvicius</name> </maintainer> +<maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> +</maintainer> </pkgmetadata> diff --git a/sci-biology/gatk/metadata.xml b/sci-biology/gatk/metadata.xml index 154ecb1ad66..6c88340e4da 100644 --- a/sci-biology/gatk/metadata.xml +++ b/sci-biology/gatk/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="github">broadgsa/gatk</remote-id> </upstream> diff --git a/sci-biology/gibbs/metadata.xml b/sci-biology/gibbs/metadata.xml index c31e2db7021..04b15c13591 100644 --- a/sci-biology/gibbs/metadata.xml +++ b/sci-biology/gibbs/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Gibbs motif sampler stochastically examines candidate alignments in an effort to find the best alignment as measured by the maximum diff --git a/sci-biology/glimmer/metadata.xml b/sci-biology/glimmer/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/glimmer/metadata.xml +++ b/sci-biology/glimmer/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/glimmerhmm/metadata.xml b/sci-biology/glimmerhmm/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/glimmerhmm/metadata.xml +++ b/sci-biology/glimmerhmm/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/gmap/metadata.xml b/sci-biology/gmap/metadata.xml index 7d62e2f44e0..75e4f21c5a7 100644 --- a/sci-biology/gmap/metadata.xml +++ b/sci-biology/gmap/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="samtools">Enable support for samtools</flag> <flag name="goby">Enable support for goby</flag> diff --git a/sci-biology/goby-cpp/metadata.xml b/sci-biology/goby-cpp/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/goby-cpp/metadata.xml +++ b/sci-biology/goby-cpp/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/goby/metadata.xml b/sci-biology/goby/metadata.xml index 3bc02ac6b32..09c094d65c3 100644 --- a/sci-biology/goby/metadata.xml +++ b/sci-biology/goby/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="cpp">Compile C/C++ API</flag> </use> diff --git a/sci-biology/hmmer/metadata.xml b/sci-biology/hmmer/metadata.xml index 66fa7662661..35f1aabfb0c 100644 --- a/sci-biology/hmmer/metadata.xml +++ b/sci-biology/hmmer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="pvm">Add support for parallel virtual machine (<pkg>sys-cluster/pvm</pkg>)</flag> diff --git a/sci-biology/iedera/metadata.xml b/sci-biology/iedera/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/iedera/metadata.xml +++ b/sci-biology/iedera/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/infernal/metadata.xml b/sci-biology/infernal/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/infernal/metadata.xml +++ b/sci-biology/infernal/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/iqpnni/metadata.xml b/sci-biology/iqpnni/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/iqpnni/metadata.xml +++ b/sci-biology/iqpnni/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/kalign/metadata.xml b/sci-biology/kalign/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/kalign/metadata.xml +++ b/sci-biology/kalign/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/lagan/metadata.xml b/sci-biology/lagan/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/lagan/metadata.xml +++ b/sci-biology/lagan/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/last/metadata.xml b/sci-biology/last/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/last/metadata.xml +++ b/sci-biology/last/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mafft/metadata.xml b/sci-biology/mafft/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/mafft/metadata.xml +++ b/sci-biology/mafft/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mammoth/metadata.xml b/sci-biology/mammoth/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/mammoth/metadata.xml +++ b/sci-biology/mammoth/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/maq/metadata.xml b/sci-biology/maq/metadata.xml index 79ebcc09421..ad8c7ce46d3 100644 --- a/sci-biology/maq/metadata.xml +++ b/sci-biology/maq/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">maq</remote-id> </upstream> diff --git a/sci-biology/maqview/metadata.xml b/sci-biology/maqview/metadata.xml index 79ebcc09421..ad8c7ce46d3 100644 --- a/sci-biology/maqview/metadata.xml +++ b/sci-biology/maqview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">maq</remote-id> </upstream> diff --git a/sci-biology/mauve/metadata.xml b/sci-biology/mauve/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/mauve/metadata.xml +++ b/sci-biology/mauve/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mauvealigner/metadata.xml b/sci-biology/mauvealigner/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/mauvealigner/metadata.xml +++ b/sci-biology/mauvealigner/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mcl/metadata.xml b/sci-biology/mcl/metadata.xml index aa6527e1e83..10a66dc7fb5 100644 --- a/sci-biology/mcl/metadata.xml +++ b/sci-biology/mcl/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="blast"> add support for NCBI BLAST data diff --git a/sci-biology/meme/metadata.xml b/sci-biology/meme/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/meme/metadata.xml +++ b/sci-biology/meme/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mira/metadata.xml b/sci-biology/mira/metadata.xml index a2c7c1a0a6a..c19aae1ceb3 100644 --- a/sci-biology/mira/metadata.xml +++ b/sci-biology/mira/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">mira-assembler</remote-id> </upstream> diff --git a/sci-biology/mosaik/metadata.xml b/sci-biology/mosaik/metadata.xml index 4dfd5b0bdaf..aa553c40c0f 100644 --- a/sci-biology/mosaik/metadata.xml +++ b/sci-biology/mosaik/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">mosaik-aligner</remote-id> </upstream> diff --git a/sci-biology/mothur/metadata.xml b/sci-biology/mothur/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/mothur/metadata.xml +++ b/sci-biology/mothur/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/mrbayes/metadata.xml b/sci-biology/mrbayes/metadata.xml index 8a6a5b986dc..261827941f1 100644 --- a/sci-biology/mrbayes/metadata.xml +++ b/sci-biology/mrbayes/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> MrBayes is a program for the Bayesian estimation of phylogeny. Bayesian inference of phylogeny is based upon a quantity called the diff --git a/sci-biology/mummer/metadata.xml b/sci-biology/mummer/metadata.xml index f82b462e1f9..c8ed0daf603 100644 --- a/sci-biology/mummer/metadata.xml +++ b/sci-biology/mummer/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">mummer</remote-id> </upstream> diff --git a/sci-biology/muscle/metadata.xml b/sci-biology/muscle/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/muscle/metadata.xml +++ b/sci-biology/muscle/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/ncbi-tools/metadata.xml b/sci-biology/ncbi-tools/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/ncbi-tools/metadata.xml +++ b/sci-biology/ncbi-tools/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/newick-utils/metadata.xml b/sci-biology/newick-utils/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/newick-utils/metadata.xml +++ b/sci-biology/newick-utils/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/njplot/metadata.xml b/sci-biology/njplot/metadata.xml index 31592430880..c8f187b0f04 100644 --- a/sci-biology/njplot/metadata.xml +++ b/sci-biology/njplot/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> NJplot is a tree drawing program able to draw any phylogenetic tree expressed in the Newick phylogenetic tree format (e.g., the format used diff --git a/sci-biology/pals/metadata.xml b/sci-biology/pals/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/pals/metadata.xml +++ b/sci-biology/pals/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/paml/metadata.xml b/sci-biology/paml/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/paml/metadata.xml +++ b/sci-biology/paml/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phrap/metadata.xml b/sci-biology/phrap/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/phrap/metadata.xml +++ b/sci-biology/phrap/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phred/metadata.xml b/sci-biology/phred/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/phred/metadata.xml +++ b/sci-biology/phred/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phylip/metadata.xml b/sci-biology/phylip/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/phylip/metadata.xml +++ b/sci-biology/phylip/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/phyml/metadata.xml b/sci-biology/phyml/metadata.xml index d0355f85e40..8626055a85f 100644 --- a/sci-biology/phyml/metadata.xml +++ b/sci-biology/phyml/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription lang="en"> Phyml is a simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Given input sequence files, it diff --git a/sci-biology/picard/metadata.xml b/sci-biology/picard/metadata.xml index 84dc21074bf..0dbbc21cb0c 100644 --- a/sci-biology/picard/metadata.xml +++ b/sci-biology/picard/metadata.xml @@ -1,11 +1,14 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> <maintainer> <email>ercpe@gentoo.org</email> <name>Johann Schmitz (ercpe)</name> </maintainer> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">picard</remote-id> </upstream> diff --git a/sci-biology/piler/metadata.xml b/sci-biology/piler/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/piler/metadata.xml +++ b/sci-biology/piler/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/pilercr/metadata.xml b/sci-biology/pilercr/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/pilercr/metadata.xml +++ b/sci-biology/pilercr/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/plink/metadata.xml b/sci-biology/plink/metadata.xml index 80af0e1d036..d2042978358 100644 --- a/sci-biology/plink/metadata.xml +++ b/sci-biology/plink/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="webcheck"> add support for online update checking every time the program starts diff --git a/sci-biology/poa/metadata.xml b/sci-biology/poa/metadata.xml index 65027f64ec2..df5a71d4b3d 100644 --- a/sci-biology/poa/metadata.xml +++ b/sci-biology/poa/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">poamsa</remote-id> </upstream> diff --git a/sci-biology/prank/metadata.xml b/sci-biology/prank/metadata.xml index 2cd3c04eeca..b78865c5970 100644 --- a/sci-biology/prank/metadata.xml +++ b/sci-biology/prank/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">prank-msa</remote-id> </upstream> diff --git a/sci-biology/primer3/metadata.xml b/sci-biology/primer3/metadata.xml index 1fbadfaf3b7..ffbf630ac6d 100644 --- a/sci-biology/primer3/metadata.xml +++ b/sci-biology/primer3/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Primer3 picks primers for PCR reactions, considering: oligonucleotide melting temperature, size, GC content, and primer-dimer possibilities; diff --git a/sci-biology/prints/metadata.xml b/sci-biology/prints/metadata.xml index 7d2927f1d2f..85aa2357947 100644 --- a/sci-biology/prints/metadata.xml +++ b/sci-biology/prints/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> A protein motif fingerprint database maintained at the University of Manchester. A fingerprint is a group of conserved motifs used to diff --git a/sci-biology/probcons/metadata.xml b/sci-biology/probcons/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/probcons/metadata.xml +++ b/sci-biology/probcons/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prodigal/metadata.xml b/sci-biology/prodigal/metadata.xml index 6e8b2ee66e6..6127cfce863 100644 --- a/sci-biology/prodigal/metadata.xml +++ b/sci-biology/prodigal/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">prodigal</remote-id> </upstream> diff --git a/sci-biology/profphd/metadata.xml b/sci-biology/profphd/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/profphd/metadata.xml +++ b/sci-biology/profphd/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/prosite/metadata.xml b/sci-biology/prosite/metadata.xml index 075d4b7bcf1..f4ae5f2f235 100644 --- a/sci-biology/prosite/metadata.xml +++ b/sci-biology/prosite/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> A protein families and domains database maintained at the Swiss Institude for Bioinformatics. It consists of biologically significant diff --git a/sci-biology/psipred/metadata.xml b/sci-biology/psipred/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/psipred/metadata.xml +++ b/sci-biology/psipred/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/pysam/metadata.xml b/sci-biology/pysam/metadata.xml index 49afc3c3d53..b5ea8de1899 100644 --- a/sci-biology/pysam/metadata.xml +++ b/sci-biology/pysam/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="google-code">pysam</remote-id> </upstream> diff --git a/sci-biology/qrna/metadata.xml b/sci-biology/qrna/metadata.xml index d4648212cba..71d4974b6dd 100644 --- a/sci-biology/qrna/metadata.xml +++ b/sci-biology/qrna/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/raxml/metadata.xml b/sci-biology/raxml/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/raxml/metadata.xml +++ b/sci-biology/raxml/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/readseq/metadata.xml b/sci-biology/readseq/metadata.xml index b198f044f3f..c4ba5b442f0 100644 --- a/sci-biology/readseq/metadata.xml +++ b/sci-biology/readseq/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> Reads and writes nucleic/protein sequences in various formats. Data files may have multiple sequences. diff --git a/sci-biology/rebase/metadata.xml b/sci-biology/rebase/metadata.xml index 734fcff7e21..00f4eff0230 100644 --- a/sci-biology/rebase/metadata.xml +++ b/sci-biology/rebase/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Restriction Enzyme data BASE is a collection of information about restriction enzymes and related proteins. It is maintained by New diff --git a/sci-biology/recon/metadata.xml b/sci-biology/recon/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/recon/metadata.xml +++ b/sci-biology/recon/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker-libraries/metadata.xml b/sci-biology/repeatmasker-libraries/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/repeatmasker-libraries/metadata.xml +++ b/sci-biology/repeatmasker-libraries/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/repeatmasker/metadata.xml b/sci-biology/repeatmasker/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/repeatmasker/metadata.xml +++ b/sci-biology/repeatmasker/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rmblast/metadata.xml b/sci-biology/rmblast/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/rmblast/metadata.xml +++ b/sci-biology/rmblast/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/rnaview/metadata.xml b/sci-biology/rnaview/metadata.xml index b243b0c8da6..40b3de3cd5a 100644 --- a/sci-biology/rnaview/metadata.xml +++ b/sci-biology/rnaview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The RNAView program generates 2-dimensional displays of RNA/DNA secondary structures with tertiary interactions. RNAView diff --git a/sci-biology/samtools/metadata.xml b/sci-biology/samtools/metadata.xml index 74dc02bc982..0a1dbde3648 100644 --- a/sci-biology/samtools/metadata.xml +++ b/sci-biology/samtools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">samtools</remote-id> </upstream> diff --git a/sci-biology/seaview/metadata.xml b/sci-biology/seaview/metadata.xml index 33794f43ab0..cd9ab1e768a 100644 --- a/sci-biology/seaview/metadata.xml +++ b/sci-biology/seaview/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> SeaView is a graphical multiple sequence alignment editor developped by Manolo Gouy. SeaView is able to read and write various alignment diff --git a/sci-biology/seqan/metadata.xml b/sci-biology/seqan/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/seqan/metadata.xml +++ b/sci-biology/seqan/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/shrimp/metadata.xml b/sci-biology/shrimp/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/shrimp/metadata.xml +++ b/sci-biology/shrimp/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/sibsim4/metadata.xml b/sci-biology/sibsim4/metadata.xml index cfcd5be131d..aa076ffc51a 100644 --- a/sci-biology/sibsim4/metadata.xml +++ b/sci-biology/sibsim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">sibsim4</remote-id> </upstream> diff --git a/sci-biology/sim4/metadata.xml b/sci-biology/sim4/metadata.xml index ea973127900..bda90bda309 100644 --- a/sci-biology/sim4/metadata.xml +++ b/sci-biology/sim4/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> sim4 is a similarity-based tool for aligning an expressed DNA sequence (EST, cDNA, mRNA) with a genomic sequence for the gene. It also detects diff --git a/sci-biology/snpfile/metadata.xml b/sci-biology/snpfile/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/snpfile/metadata.xml +++ b/sci-biology/snpfile/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/stride/metadata.xml b/sci-biology/stride/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/stride/metadata.xml +++ b/sci-biology/stride/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/t-coffee/metadata.xml b/sci-biology/t-coffee/metadata.xml index 9a577185ee3..c3fee0cdc75 100644 --- a/sci-biology/t-coffee/metadata.xml +++ b/sci-biology/t-coffee/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> T-Coffee is a multiple sequence alignment package. Given a set of sequences (Proteins or DNA), T-Coffee generates a multiple sequence diff --git a/sci-biology/tophat/metadata.xml b/sci-biology/tophat/metadata.xml index 36cf4a13894..82e16023cf2 100644 --- a/sci-biology/tophat/metadata.xml +++ b/sci-biology/tophat/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="bam">Compile support for the BAM format</flag> </use> diff --git a/sci-biology/transfac/metadata.xml b/sci-biology/transfac/metadata.xml index d07df4fd4db..73322a777ed 100644 --- a/sci-biology/transfac/metadata.xml +++ b/sci-biology/transfac/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TRANSFAC® is a database of eukaryotic transcription factors, of their genomic binding sites and DNA-binding profiles. TRANSFAC 3.2 is an old diff --git a/sci-biology/tree-puzzle/metadata.xml b/sci-biology/tree-puzzle/metadata.xml index cbdeede346f..2db6e8eb8fa 100644 --- a/sci-biology/tree-puzzle/metadata.xml +++ b/sci-biology/tree-puzzle/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TREE-PUZZLE is a computer program to reconstruct phylogenetic trees from molecular sequence data by maximum likelihood. It implements a diff --git a/sci-biology/treeviewx/metadata.xml b/sci-biology/treeviewx/metadata.xml index e351ff6c1fa..9a2171b2dfa 100644 --- a/sci-biology/treeviewx/metadata.xml +++ b/sci-biology/treeviewx/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> TreeView X is a program for displaying phylogenetic trees on Linux and UNIX platforms. It can read and display NEXUS and Newick format tree diff --git a/sci-biology/trf/metadata.xml b/sci-biology/trf/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/trf/metadata.xml +++ b/sci-biology/trf/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/trnascan-se/metadata.xml b/sci-biology/trnascan-se/metadata.xml index 55de1683677..ec21c8b9a5f 100644 --- a/sci-biology/trnascan-se/metadata.xml +++ b/sci-biology/trnascan-se/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> tRNAscan-SE detects ~99% of eukaryotic nuclear or prokaryotic tRNA genes, with a false positive rate of less than one per 15 gigabases, diff --git a/sci-biology/uchime/metadata.xml b/sci-biology/uchime/metadata.xml index a3c0f91c8a0..95ce07d4604 100644 --- a/sci-biology/uchime/metadata.xml +++ b/sci-biology/uchime/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> UCHIME is a new algorithm for detecting chimeric sequences. It was developed in collaboration with Brian Haas, Jose Carlos Clemente, Chris Quince and Rob diff --git a/sci-biology/ucsc-genome-browser/metadata.xml b/sci-biology/ucsc-genome-browser/metadata.xml index f1f3ccfb77e..76c6964ed42 100644 --- a/sci-biology/ucsc-genome-browser/metadata.xml +++ b/sci-biology/ucsc-genome-browser/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="server">Install genome browser Web application. If this flag is off, only libraries and utilities from the suite are installed.</flag> </use> diff --git a/sci-biology/unafold/metadata.xml b/sci-biology/unafold/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/unafold/metadata.xml +++ b/sci-biology/unafold/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/update-blastdb/metadata.xml b/sci-biology/update-blastdb/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/update-blastdb/metadata.xml +++ b/sci-biology/update-blastdb/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vaal/metadata.xml b/sci-biology/vaal/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/vaal/metadata.xml +++ b/sci-biology/vaal/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vcftools/metadata.xml b/sci-biology/vcftools/metadata.xml index c45e9f4dea0..0f9d97881e5 100644 --- a/sci-biology/vcftools/metadata.xml +++ b/sci-biology/vcftools/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">vcftools</remote-id> </upstream> diff --git a/sci-biology/velvet/metadata.xml b/sci-biology/velvet/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/velvet/metadata.xml +++ b/sci-biology/velvet/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/vienna-rna/metadata.xml b/sci-biology/vienna-rna/metadata.xml index 50f4e02d4a1..74cfe54c799 100644 --- a/sci-biology/vienna-rna/metadata.xml +++ b/sci-biology/vienna-rna/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <longdescription> The Vienna RNA Package consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary diff --git a/sci-biology/wgs-assembler/metadata.xml b/sci-biology/wgs-assembler/metadata.xml index 8e4a7436807..3b4bdcaa7d3 100644 --- a/sci-biology/wgs-assembler/metadata.xml +++ b/sci-biology/wgs-assembler/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <upstream> <remote-id type="sourceforge">wgs-assembler</remote-id> </upstream> diff --git a/sci-biology/wise/metadata.xml b/sci-biology/wise/metadata.xml index f17a827e310..8b0589b2721 100644 --- a/sci-biology/wise/metadata.xml +++ b/sci-biology/wise/metadata.xml @@ -1,5 +1,8 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> </pkgmetadata> diff --git a/sci-biology/yass/metadata.xml b/sci-biology/yass/metadata.xml index e4a717e691b..f2397a173c2 100644 --- a/sci-biology/yass/metadata.xml +++ b/sci-biology/yass/metadata.xml @@ -1,7 +1,10 @@ <?xml version="1.0" encoding="UTF-8"?> <!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> <pkgmetadata> - <herd>sci-biology</herd> + <maintainer> + <email>sci-biology@gentoo.org</email> + <name>Gentoo Biology Project</name> + </maintainer> <use> <flag name="dmalloc">Enable debugging with the dmalloc library</flag> <flag name="lowmem">Build for environments with low amounts of memory</flag> |