proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

5 files changed, 130 insertions, 0 deletions

diff --git a/sci-libs/inchi/Manifest b/sci-libs/inchi/Manifest
new file mode 100644
index 00000000000..2bdd0b47645
--- /dev/null
+++ b/sci-libs/inchi/Manifest
@@ -0,0 +1,2 @@
+DIST inchi-1.04-doc.zip 2128303 SHA256 abede36063e838614aa6ade7f20f386f557a78aefb041e1ba0b736088a6a79bc SHA512 930fe10ac2bae11074b7e47446b5af9c01e2aa55f891d04912c71c76e214871c78cc22b3dafea99b57eede5080ac0cfaa6b6d35a73242c8549bea8ffa86e7df7 WHIRLPOOL 5cb5884dbfc9f2e530deb8be0e35643b0a6af70a5b4e069cd610407fac067261a3282ad9db22651fc2efc313ade78930de10ff165dd709a83880815b89e4a4fd
+DIST inchi-1.04.zip 2701930 SHA256 c187573c0f6a1fcd555393315383bd1f69563ee47bd43c898f17c473b7bb690a SHA512 c5a1c2f08d472fcde603acbd898a9a8880407474869eadf0089444503693ae89ff805c579161cb3ee9d7f18e891289a21c4b8a65cc7ece69ee730f7f4e283be4 WHIRLPOOL 89a7ac2f80a9a87a663934bd0f24af6aed77f51115bf0b4858f66c135f932b67dff7bbffa16999ab79f7ca1358ef716fa5f11cb8756011f7622f6440470c59e4
diff --git a/sci-libs/inchi/files/inchi-1.03-shared.patch b/sci-libs/inchi/files/inchi-1.03-shared.patch
new file mode 100644
index 00000000000..6f4619d86bd
--- /dev/null
+++ b/sci-libs/inchi/files/inchi-1.03-shared.patch
@@ -0,0 +1,20 @@
+ INCHI_API/gcc_so_makefile/makefile |    4 +++-
+ 1 files changed, 3 insertions(+), 1 deletions(-)
+
+diff --git a/INCHI_API/gcc_so_makefile/makefile b/INCHI_API/gcc_so_makefile/makefile
+index dd8e53c..cd617ad 100644
+--- a/INCHI_API/gcc_so_makefile/makefile
++++ b/INCHI_API/gcc_so_makefile/makefile
+@@ -213,9 +213,11 @@ $(INCHI_LIB_PATHNAME).so$(VERSION): $(INCHI_LIB_OBJS)
+ 	$(SHARED_LINK) $(SHARED_LINK_PARM) -o \
+   $(INCHI_LIB_PATHNAME).so$(VERSION) \
+   $(INCHI_LIB_OBJS) \
+-  -Wl$(LINUX_MAP)$(LINUX_Z_RELRO),-soname,$(INCHI_LIB_NAME).so$(MAIN_VERSION)
++  -Wl$(LINUX_MAP)$(LINUX_Z_RELRO),-soname,$(INCHI_LIB_NAME).so$(MAIN_VERSION) -lm
+ 	ln -fs $(INCHI_LIB_NAME).so$(VERSION) \
+   $(INCHI_LIB_PATHNAME).so$(MAIN_VERSION)
++	ln -fs $(INCHI_LIB_NAME).so$(VERSION) \
++  $(INCHI_LIB_PATHNAME).so
+ 
+ endif
+ 
diff --git a/sci-libs/inchi/files/inchi-1.04-static.patch b/sci-libs/inchi/files/inchi-1.04-static.patch
new file mode 100644
index 00000000000..a367c153824
--- /dev/null
+++ b/sci-libs/inchi/files/inchi-1.04-static.patch
@@ -0,0 +1,26 @@
+--- INCHI_API/gcc_so_makefile/makefile	2012-05-13 14:52:53.587632989 +0300
++++ INCHI_API/gcc_so_makefile/makefile	2012-05-13 14:52:11.668635419 +0300
+@@ -209,6 +209,14 @@
+ 
+ else
+ 
++ifdef STATIC
++
++libinchi.a: $(INCHI_LIB_OBJS)
++	$(AR) rcs $(INCHI_LIB_PATHNAME).a $(INCHI_LIB_OBJS)
++	$(RANLIB) $(INCHI_LIB_PATHNAME).a
++
++else
++
+ $(INCHI_LIB_PATHNAME).so$(VERSION): $(INCHI_LIB_OBJS)
+ 	$(SHARED_LINK) $(SHARED_LINK_PARM) -o \
+   $(INCHI_LIB_PATHNAME).so$(VERSION) \
+@@ -219,6 +226,8 @@
+ 
+ endif
+ 
++endif
++
+ # === InChI Library compile rule =========
+ 
+ %.o: $(P_LIBR)%.c
diff --git a/sci-libs/inchi/inchi-1.04.ebuild b/sci-libs/inchi/inchi-1.04.ebuild
new file mode 100644
index 00000000000..06370f2fd48
--- /dev/null
+++ b/sci-libs/inchi/inchi-1.04.ebuild
@@ -0,0 +1,74 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit eutils toolchain-funcs
+
+DESCRIPTION="A program and library for generating standard and non-standard InChI and InChIKeys"
+HOMEPAGE="http://www.iupac.org/inchi/"
+SRC_URI="
+	http://www.inchi-trust.org/sites/default/files/inchi-${PV}/INCHI-1-API.ZIP -> ${P}.zip
+	doc? ( http://www.inchi-trust.org/sites/default/files/inchi-${PV}/INCHI-1-DOC.ZIP -> ${P}-doc.zip )"
+
+LICENSE="IUPAC-InChi"
+SLOT="0"
+KEYWORDS="amd64 arm ppc ppc64 x86 ~amd64-linux ~x86-linux"
+IUSE="doc static-libs"
+
+DEPEND="app-arch/unzip"
+RDEPEND=""
+
+S="${WORKDIR}"/INCHI-1-API
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${PN}-1.03-shared.patch \
+		"${FILESDIR}"/${PN}-1.04-static.patch
+	tc-export AR RANLIB
+}
+
+src_compile() {
+	local dir common_opts
+	common_opts=(
+			C_COMPILER=$(tc-getCC)
+			CPP_COMPILER=$(tc-getCXX)
+			LINKER="$(tc-getCXX) ${LDFLAGS}"
+			SHARED_LINK="$(tc-getCC) ${LDFLAGS} -shared"
+			C_COMPILER_OPTIONS="\${P_INCL} -ansi -DCOMPILE_ANSI_ONLY ${CFLAGS} -c "
+			CPP_COMPILER_OPTIONS="\${P_INCL} -D_LIB -ansi ${CXXFLAGS} -frtti -c "
+			C_OPTIONS="${CFLAGS} -fPIC -c "
+			LINKER_OPTIONS="${LDFLAGS}"
+			CREATE_MAIN=
+			ISLINUX=1
+	)
+	for dir in  INCHI/gcc/inchi-1 INCHI_API/gcc_so_makefile; do
+		pushd ${dir} > /dev/null
+		emake \
+			"${common_opts[@]}"
+		popd > /dev/null
+	done
+	if use static-libs ; then
+		pushd INCHI_API/gcc_so_makefile > /dev/null
+		emake libinchi.a \
+				"${common_opts[@]}" \
+				STATIC=1
+		popd > /dev/null
+	fi
+}
+
+src_install() {
+	dodoc readme*.txt
+	if use doc ; then
+		cd "${WORKDIR}/INCHI-1-DOC/"
+		docinto doc
+		dodoc *.pdf readme.txt
+	fi
+	dobin "${S}"/INCHI/gcc/inchi-1/inchi-1
+	cd "${S}/INCHI_API/gcc_so_makefile/result" || die
+	rm *gz || die
+	dolib.so lib*so*
+	use static-libs && dolib.a lib*a
+	doheader ../../inchi_main/inchi_api.h
+}
diff --git a/sci-libs/inchi/metadata.xml b/sci-libs/inchi/metadata.xml
new file mode 100644
index 00000000000..a168ded5a2e
--- /dev/null
+++ b/sci-libs/inchi/metadata.xml
@@ -0,0 +1,8 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+  <longdescription>
+Program v1.03 implementing IUPAC (Standard) InChI/InChIKey version 1.
+</longdescription>
+</pkgmetadata>