proj/gentoo: Initial commit

This commit represents a new era for Gentoo:
Storing the gentoo-x86 tree in Git, as converted from CVS.

This commit is the start of the NEW history.
Any historical data is intended to be grafted onto this point.

Creation process:
1. Take final CVS checkout snapshot
2. Remove ALL ChangeLog* files
3. Transform all Manifests to thin
4. Remove empty Manifests
5. Convert all stale $Header$/$Id$ CVS keywords to non-expanded Git $Id$
5.1. Do not touch files with -kb/-ko keyword flags.

Signed-off-by: Robin H. Johnson <robbat2@gentoo.org>
X-Thanks: Alec Warner <antarus@gentoo.org> - did the GSoC 2006 migration tests
X-Thanks: Robin H. Johnson <robbat2@gentoo.org> - infra guy, herding this project
X-Thanks: Nguyen Thai Ngoc Duy <pclouds@gentoo.org> - Former Gentoo developer, wrote Git features for the migration
X-Thanks: Brian Harring <ferringb@gentoo.org> - wrote much python to improve cvs2svn
X-Thanks: Rich Freeman <rich0@gentoo.org> - validation scripts
X-Thanks: Patrick Lauer <patrick@gentoo.org> - Gentoo dev, running new 2014 work in migration
X-Thanks: Michał Górny <mgorny@gentoo.org> - scripts, QA, nagging
X-Thanks: All of other Gentoo developers - many ideas and lots of paint on the bikeshed

9 files changed, 437 insertions, 0 deletions

diff --git a/sci-mathematics/glpk/Manifest b/sci-mathematics/glpk/Manifest
new file mode 100644
index 00000000000..0a4f763600c
--- /dev/null
+++ b/sci-mathematics/glpk/Manifest
@@ -0,0 +1,4 @@
+DIST glpk-4.45.tar.gz 3132439 SHA256 9207cb613d4436d9a66bc1b1f2018176d106cef0e92a3a85500feeec373be98c SHA512 27089b760d89ee16c5a3332d319007af4b05e8d27df0b990311508f856a01461d8b7b40b111bbf1f3dd4d754af84000112f95349d5286e6d3e42e56226f98649 WHIRLPOOL 7c050210e29f4c13b39e85dc10c9aeed846d7ee912c7dac5a83d13b87648a4e4bf4dce365d2575b6ad7994c56570d74ec87c219f101aaccbec39fd0e14353182
+DIST glpk-4.48.tar.gz 3488482 SHA256 abc2c8f895b20a91cdfcfc04367a0bc8677daf8b4ec3f3e86c5b71c79ac6adb1 SHA512 16795e6cf4db302f25e06e5c9a660e5ed8c7b24ffc5126cde0f864e83fa77d4d61838eab4f716291d568963dddf7442a36a39425a62bd58bd00ca73dac4ffa70 WHIRLPOOL c3e826d08cc6033e8553d7d1fb2a556d42622f38a184e8bbc18bf29d872103245218482b749bfb214cf707cc60eaaf54d7e6840537b483cf8e63c2d33b2c313d
+DIST glpk-4.54.tar.gz 3098202 SHA256 ab72c8078402d34d176eda18c3f9a6ef006e223d530897a4d1d73fb4ad12f9a1 SHA512 7eb815a6d8416dd9f2bb94e9a4aef493c171898404ebc6276fcc1c4f3b4244220213a2bd098707104589348080820a7cb8a717aab73ca513f05b2f9a10aea070 WHIRLPOOL 56ff0baf5e98fdc8e12e4d4db664a4a287dc358dd75839d90d463c04e3e7d97b1023ea93217dd642f6737cccddecdb8f534980e48f8893aff395dc430622de69
+DIST glpk-4.55.tar.gz 3424345 SHA256 37090d7f16796ec1034496e182a39d5cc8bb7c9fb5dc48a38b13d620bf2b1de7 SHA512 a0c8ce0c850e0075098f0526db8f7584a86d5cb44d8ddefa55abf9f1f66af89f5aec19cf1cad51fc5585d8dfa50eab6ece984a038e00c472aec2ef1473eac689 WHIRLPOOL 4b3f543c862008dd09e867947c0383eb2f482f63b8fe30d9f682ccc7d0af1693af043c8cd63362be1bc736ef39393d59cdf0196326b08c7f48495bb5b5937487
diff --git a/sci-mathematics/glpk/files/glpk-4.52.1-mariadb-5.5.patch b/sci-mathematics/glpk/files/glpk-4.52.1-mariadb-5.5.patch
new file mode 100644
index 00000000000..06aa8e5de95
--- /dev/null
+++ b/sci-mathematics/glpk/files/glpk-4.52.1-mariadb-5.5.patch
@@ -0,0 +1,11 @@
+--- glpk-4.52.1/src/glpsql.c.orig	2014-02-05 22:14:21.487843989 +0100
++++ glpk-4.52.1/src/glpsql.c	2014-02-05 22:14:32.764510562 +0100
+@@ -1106,8 +1106,6 @@
+ #define byte_defined 1
+ #endif
+ 
+-#include <my_global.h>
+-#include <my_sys.h>
+ #include <mysql.h>
+ 
+ struct db_mysql
diff --git a/sci-mathematics/glpk/files/glpk-4.53-debundle-system-libs.patch b/sci-mathematics/glpk/files/glpk-4.53-debundle-system-libs.patch
new file mode 100644
index 00000000000..326e6130154
--- /dev/null
+++ b/sci-mathematics/glpk/files/glpk-4.53-debundle-system-libs.patch
@@ -0,0 +1,87 @@
+Remove suitesparse (camd,colamd) and zlib bundles
+
+--- configure.ac.orig	2014-03-24 10:40:24.406906149 -0700
++++ configure.ac	2014-03-24 10:41:15.637207696 -0700
+@@ -140,6 +140,13 @@
+    AC_MSG_RESULT([no])
+ fi
+ 
++AC_CHECK_LIB([amd], [amd_1])
++AC_CHECK_LIB([colamd], [colamd])
++
++AC_CHECK_HEADER([amd.h])
++
++AC_CHECK_LIB([z], [gzopen])
++
+ AC_CONFIG_FILES(
+    [src/Makefile examples/Makefile Makefile])
+ AC_OUTPUT
+--- src/Makefile.am.orig	2014-03-24 10:40:24.413906191 -0700
++++ src/Makefile.am	2014-03-24 10:41:15.636207690 -0700
+@@ -6,15 +6,12 @@
+ 
+ libglpk_la_CPPFLAGS = \
+ -I$(srcdir) \
+--I$(srcdir)/amd \
+ -I$(srcdir)/bflib \
+ -I$(srcdir)/cglib \
+--I$(srcdir)/colamd \
+ -I$(srcdir)/env \
+ -I$(srcdir)/minisat \
+ -I$(srcdir)/misc \
+--I$(srcdir)/proxy \
+--I$(srcdir)/zlib
++-I$(srcdir)/proxy
+ 
+ libglpk_la_LDFLAGS = \
+ -version-info 37:0:1 \
+@@ -93,18 +90,6 @@
+ glpssx02.c \
+ glptsp.c \
+ lux.c \
+-amd/amd_1.c \
+-amd/amd_2.c \
+-amd/amd_aat.c \
+-amd/amd_control.c \
+-amd/amd_defaults.c \
+-amd/amd_dump.c \
+-amd/amd_info.c \
+-amd/amd_order.c \
+-amd/amd_post_tree.c \
+-amd/amd_postorder.c \
+-amd/amd_preprocess.c \
+-amd/amd_valid.c \
+ bflib/fhv.c \
+ bflib/fhvint.c \
+ bflib/ifu.c \
+@@ -114,7 +99,6 @@
+ bflib/sva.c \
+ cglib/cfg.c \
+ cglib/cfg1.c \
+-colamd/colamd.c \
+ env/alloc.c \
+ env/dlsup.c \
+ env/env.c \
+@@ -147,21 +131,6 @@
+ misc/wclique.c \
+ misc/wclique1.c \
+ proxy/proxy.c \
+-proxy/proxy1.c \
+-zlib/adler32.c \
+-zlib/compress.c \
+-zlib/crc32.c \
+-zlib/deflate.c \
+-zlib/gzclose.c \
+-zlib/gzlib.c \
+-zlib/gzread.c \
+-zlib/gzwrite.c \
+-zlib/inffast.c \
+-zlib/inflate.c \
+-zlib/inftrees.c \
+-zlib/trees.c \
+-zlib/uncompr.c \
+-zlib/zio.c \
+-zlib/zutil.c
++proxy/proxy1.c
+ 
+ ## eof ##
diff --git a/sci-mathematics/glpk/files/glpk-4.54-debundle-system-libs.patch b/sci-mathematics/glpk/files/glpk-4.54-debundle-system-libs.patch
new file mode 100644
index 00000000000..a3140341a48
--- /dev/null
+++ b/sci-mathematics/glpk/files/glpk-4.54-debundle-system-libs.patch
@@ -0,0 +1,86 @@
+Remove suitesparse (camd,colamd) and zlib bundles
+bicatali - apr 2014
+
+--- configure.ac.orig	2014-04-05 14:18:56.045148287 -0700
++++ configure.ac	2014-04-05 14:23:24.878803309 -0700
+@@ -59,6 +59,11 @@
+ dnl Check for math library
+ AC_CHECK_LIB([m], [exp])
+ 
++AC_CHECK_LIB([amd], [amd_1])
++AC_CHECK_LIB([colamd], [colamd])
++AC_CHECK_HEADER([amd.h])
++AC_CHECK_LIB([z], [gzopen])
++
+ dnl Check for <sys/time.h> header
+ AC_CHECK_HEADER([sys/time.h],
+    AC_DEFINE([HAVE_SYS_TIME_H], [1], [N/A]))
+--- src/Makefile.am.orig	2014-04-05 14:19:16.401273769 -0700
++++ src/Makefile.am	2014-04-05 14:21:56.696259485 -0700
+@@ -6,15 +6,12 @@
+ 
+ libglpk_la_CPPFLAGS = \
+ -I$(srcdir) \
+--I$(srcdir)/amd \
+ -I$(srcdir)/bflib \
+ -I$(srcdir)/cglib \
+--I$(srcdir)/colamd \
+ -I$(srcdir)/env \
+ -I$(srcdir)/minisat \
+ -I$(srcdir)/misc \
+--I$(srcdir)/proxy \
+--I$(srcdir)/zlib
++-I$(srcdir)/proxy
+ 
+ libglpk_la_LDFLAGS = \
+ -version-info 37:1:1 \
+@@ -92,18 +89,6 @@
+ glpssx02.c \
+ glptsp.c \
+ lux.c \
+-amd/amd_1.c \
+-amd/amd_2.c \
+-amd/amd_aat.c \
+-amd/amd_control.c \
+-amd/amd_defaults.c \
+-amd/amd_dump.c \
+-amd/amd_info.c \
+-amd/amd_order.c \
+-amd/amd_post_tree.c \
+-amd/amd_postorder.c \
+-amd/amd_preprocess.c \
+-amd/amd_valid.c \
+ bflib/btf.c \
+ bflib/btfint.c \
+ bflib/fhv.c \
+@@ -117,7 +102,6 @@
+ bflib/sva.c \
+ cglib/cfg.c \
+ cglib/cfg1.c \
+-colamd/colamd.c \
+ env/alloc.c \
+ env/dlsup.c \
+ env/env.c \
+@@ -150,21 +134,6 @@
+ misc/wclique.c \
+ misc/wclique1.c \
+ proxy/proxy.c \
+-proxy/proxy1.c \
+-zlib/adler32.c \
+-zlib/compress.c \
+-zlib/crc32.c \
+-zlib/deflate.c \
+-zlib/gzclose.c \
+-zlib/gzlib.c \
+-zlib/gzread.c \
+-zlib/gzwrite.c \
+-zlib/inffast.c \
+-zlib/inflate.c \
+-zlib/inftrees.c \
+-zlib/trees.c \
+-zlib/uncompr.c \
+-zlib/zio.c \
+-zlib/zutil.c
++proxy/proxy1.c
+ 
+ ## eof ##
diff --git a/sci-mathematics/glpk/glpk-4.45.ebuild b/sci-mathematics/glpk/glpk-4.45.ebuild
new file mode 100644
index 00000000000..22aad3ba5f4
--- /dev/null
+++ b/sci-mathematics/glpk/glpk-4.45.ebuild
@@ -0,0 +1,64 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=2
+
+inherit eutils flag-o-matic
+
+DESCRIPTION="GNU Linear Programming Kit"
+LICENSE="GPL-3"
+HOMEPAGE="http://www.gnu.org/software/glpk/"
+SRC_URI="mirror://gnu/${PN}/${P}.tar.gz"
+
+SLOT="0"
+IUSE="doc examples gmp odbc mysql static-libs"
+KEYWORDS="alpha amd64 hppa ppc ppc64 sparc x86 ~ppc-aix ~x86-fbsd ~amd64-linux ~x86-linux"
+
+RDEPEND="sys-libs/zlib
+	odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+	gmp? ( dev-libs/gmp )
+	mysql? ( virtual/mysql )"
+
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+src_prepare() {
+	epatch 	"${FILESDIR}"/${PN}-4.52.1-mariadb-5.5.patch
+}
+
+src_configure() {
+	local myconf="--disable-dl"
+	if use mysql || use odbc; then
+		myconf="--enable-dl"
+	fi
+
+	[[ -z $(type -P odbc-config) ]] && \
+		append-cppflags $(pkg-config --cflags libiodbc)
+
+	econf \
+		--with-zlib \
+		$(use_enable static-libs static) \
+		$(use_with gmp) \
+		$(use_enable odbc) \
+		$(use_enable mysql) \
+		${myconf}
+}
+
+src_install() {
+	emake DESTDIR="${D}" install || die "emake install failed"
+
+	dodoc AUTHORS ChangeLog NEWS README || \
+		die "failed to install docs"
+
+	insinto /usr/share/doc/${PF}
+	if use examples; then
+		emake distclean
+		doins -r examples || die "failed to install examples"
+	fi
+	if use doc; then
+		cd "${S}"/doc
+		doins *.pdf notes/*.pdf || die "failed to instal djvu and pdf"
+		dodoc *.txt || die "failed to install manual files"
+	fi
+}
diff --git a/sci-mathematics/glpk/glpk-4.48.ebuild b/sci-mathematics/glpk/glpk-4.48.ebuild
new file mode 100644
index 00000000000..f7deb9c172a
--- /dev/null
+++ b/sci-mathematics/glpk/glpk-4.48.ebuild
@@ -0,0 +1,53 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit eutils flag-o-matic toolchain-funcs autotools-utils
+
+DESCRIPTION="GNU Linear Programming Kit"
+LICENSE="GPL-3"
+HOMEPAGE="http://www.gnu.org/software/glpk/"
+SRC_URI="mirror://gnu/${PN}/${P}.tar.gz"
+
+SLOT="0"
+IUSE="doc examples gmp odbc mysql static-libs"
+KEYWORDS="~alpha ~amd64 ~arm ~hppa ~ppc ~ppc64 ~sparc ~x86 ~ppc-aix ~amd64-fbsd ~x86-fbsd ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
+
+RDEPEND="
+	gmp? ( dev-libs/gmp:0 )
+	mysql? ( virtual/mysql )
+	odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )"
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.52.1-mariadb-5.5.patch
+)
+
+src_configure() {
+	local myeconfargs=(
+		$(use_enable mysql)
+		$(use_enable odbc)
+		$(use_with gmp)
+	)
+	if use mysql || use odbc; then
+		myeconfargs+=( --enable-dl )
+	else
+		myeconfargs+=( --disable-dl )
+	fi
+	[[ -z $(type -P odbc-config) ]] && \
+		append-cppflags $($(tc-getPKG_CONFIG) --cflags libiodbc)
+
+	autotools-utils_src_configure
+}
+
+src_install() {
+	autotools-utils_src_install
+	if use examples; then
+		insinto /usr/share/doc/${PF}
+		doins -r examples
+	fi
+	use doc && dodoc doc/*.pdf doc/notes/*.pdf doc/*.txt
+}
diff --git a/sci-mathematics/glpk/glpk-4.54.ebuild b/sci-mathematics/glpk/glpk-4.54.ebuild
new file mode 100644
index 00000000000..d31d5aa9636
--- /dev/null
+++ b/sci-mathematics/glpk/glpk-4.54.ebuild
@@ -0,0 +1,59 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+AUTOTOOLS_AUTORECONF=1
+
+inherit eutils flag-o-matic toolchain-funcs autotools-utils
+
+DESCRIPTION="GNU Linear Programming Kit"
+LICENSE="GPL-3"
+HOMEPAGE="http://www.gnu.org/software/glpk/"
+SRC_URI="mirror://gnu/${PN}/${P}.tar.gz"
+
+SLOT="0/36"
+IUSE="doc examples gmp odbc mysql static-libs"
+KEYWORDS="~amd64 ~arm ~hppa ~ppc ~ppc64 ~sparc ~x86 ~ppc-aix ~amd64-fbsd ~x86-fbsd ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
+
+RDEPEND="
+	sci-libs/amd:0=
+	sci-libs/colamd:=
+	sys-libs/zlib:0=
+	gmp? ( dev-libs/gmp:0= )
+	mysql? ( virtual/mysql )
+	odbc? ( || ( dev-db/libiodbc:0 dev-db/unixODBC:0 ) )"
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.54-debundle-system-libs.patch
+)
+
+src_configure() {
+	local myeconfargs=(
+		$(use_enable mysql)
+		$(use_enable odbc)
+		$(use_with gmp)
+	)
+	if use mysql || use odbc; then
+		myeconfargs+=( --enable-dl )
+	else
+		myeconfargs+=( --disable-dl )
+	fi
+	[[ -z $(type -P odbc-config) ]] && \
+		append-cppflags $($(tc-getPKG_CONFIG) --cflags libiodbc)
+
+	autotools-utils_src_configure
+}
+
+src_install() {
+	autotools-utils_src_install
+	if use examples; then
+		insinto /usr/share/doc/${PF}
+		doins -r examples
+		docompress -x /usr/share/doc/${PF}/examples
+	fi
+	use doc && dodoc doc/*.pdf doc/notes/*.pdf doc/*.txt
+}
diff --git a/sci-mathematics/glpk/glpk-4.55.ebuild b/sci-mathematics/glpk/glpk-4.55.ebuild
new file mode 100644
index 00000000000..d31d5aa9636
--- /dev/null
+++ b/sci-mathematics/glpk/glpk-4.55.ebuild
@@ -0,0 +1,59 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+AUTOTOOLS_AUTORECONF=1
+
+inherit eutils flag-o-matic toolchain-funcs autotools-utils
+
+DESCRIPTION="GNU Linear Programming Kit"
+LICENSE="GPL-3"
+HOMEPAGE="http://www.gnu.org/software/glpk/"
+SRC_URI="mirror://gnu/${PN}/${P}.tar.gz"
+
+SLOT="0/36"
+IUSE="doc examples gmp odbc mysql static-libs"
+KEYWORDS="~amd64 ~arm ~hppa ~ppc ~ppc64 ~sparc ~x86 ~ppc-aix ~amd64-fbsd ~x86-fbsd ~amd64-linux ~x86-linux ~x64-macos ~x86-macos"
+
+RDEPEND="
+	sci-libs/amd:0=
+	sci-libs/colamd:=
+	sys-libs/zlib:0=
+	gmp? ( dev-libs/gmp:0= )
+	mysql? ( virtual/mysql )
+	odbc? ( || ( dev-db/libiodbc:0 dev-db/unixODBC:0 ) )"
+DEPEND="${RDEPEND}
+	virtual/pkgconfig"
+
+PATCHES=(
+	"${FILESDIR}"/${PN}-4.54-debundle-system-libs.patch
+)
+
+src_configure() {
+	local myeconfargs=(
+		$(use_enable mysql)
+		$(use_enable odbc)
+		$(use_with gmp)
+	)
+	if use mysql || use odbc; then
+		myeconfargs+=( --enable-dl )
+	else
+		myeconfargs+=( --disable-dl )
+	fi
+	[[ -z $(type -P odbc-config) ]] && \
+		append-cppflags $($(tc-getPKG_CONFIG) --cflags libiodbc)
+
+	autotools-utils_src_configure
+}
+
+src_install() {
+	autotools-utils_src_install
+	if use examples; then
+		insinto /usr/share/doc/${PF}
+		doins -r examples
+		docompress -x /usr/share/doc/${PF}/examples
+	fi
+	use doc && dodoc doc/*.pdf doc/notes/*.pdf doc/*.txt
+}
diff --git a/sci-mathematics/glpk/metadata.xml b/sci-mathematics/glpk/metadata.xml
new file mode 100644
index 00000000000..f58fdc6b640
--- /dev/null
+++ b/sci-mathematics/glpk/metadata.xml
@@ -0,0 +1,14 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-mathematics</herd>
+  <maintainer>
+    <email>robbat2@gentoo.org</email>
+  </maintainer>
+  <longdescription lang="en">
+  The GNU Linear Programming Kit package is intended for solving
+  large-scale linear programming (LP), mixed integer programming
+  (MIP), and other related problems. It is a set of routines written
+  in ANSI C and organized in the form of a callable library. 
+</longdescription>
+</pkgmetadata>