diff options
Diffstat (limited to 'sci-biology/seqan/seqan-1.3.1-r1.ebuild')
-rw-r--r-- | sci-biology/seqan/seqan-1.3.1-r1.ebuild | 50 |
1 files changed, 0 insertions, 50 deletions
diff --git a/sci-biology/seqan/seqan-1.3.1-r1.ebuild b/sci-biology/seqan/seqan-1.3.1-r1.ebuild deleted file mode 100644 index 2bcb7f651f5..00000000000 --- a/sci-biology/seqan/seqan-1.3.1-r1.ebuild +++ /dev/null @@ -1,50 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Id$ - -EAPI=5 - -PYTHON_COMPAT=( python2_7 ) - -inherit cmake-utils flag-o-matic python-single-r1 - -DESCRIPTION="C++ Sequence Analysis Library" -HOMEPAGE="http://www.seqan.de/" -SRC_URI="http://ftp.seqan.de/releases/${P}.zip" - -SLOT="0" -LICENSE="BSD GPL-3" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -IUSE="" - -REQUIRED_USE="${PYTHON_REQUIRED_USE}" - -RDEPEND="${PYTHON_DEPS} - ~sci-biology/samtools-0.1.19" -DEPEND="${RDEPEND}" - -S="${WORKDIR}"/${P}/cmake - -pkg_setup() { - if [[ ${MERGE_TYPE} != binary ]]; then - [[ $(gcc-major-version) -gt 4 ]] || \ - ( [[ $(gcc-major-version) -eq 4 && $(gcc-minor-version) -gt 8 ]] ) \ - && die "Sorry, but gcc 4.9 or higher is unsupported" - fi -} - -src_prepare() { - append-cppflags -I"${EPREFIX}/usr/include/bam" - rm -rf "${S}"/../lib/samtools || die - - sed \ - -e "s:docs:docs/.:g" \ - -e "/DESTINATION/s:seqan:doc/${PF}/html:g" \ - -i CMakeLists.txt || die - - sed \ - -e "/DESTINATION/s:bin):share/${PN}):g" \ - -i apps/CMakeLists.txt || die - - cmake-utils_src_prepare -} |