diff options
Diffstat (limited to 'sci-biology')
| -rw-r--r-- | sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch | 29 |
1 files changed, 0 insertions, 29 deletions
diff --git a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch b/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch deleted file mode 100644 index 71c4ca27104..00000000000 --- a/sci-biology/bioruby/files/bioruby-1.4.3.0001-fix-tests.patch +++ /dev/null @@ -1,29 +0,0 @@ -From edda65b8fb32c2eee6b0652074981c31aa68b0eb Mon Sep 17 00:00:00 2001 -From: Naohisa Goto <ng@bioruby.org> -Date: Fri, 23 Aug 2013 23:51:59 +0900 -Subject: [PATCH] Test bug fix: Read test file with binary mode to avoid - encoding error - - * Test bug fix: Read test file with binary mode to avoid string encoding - error. Thanks to nieder (github.com/nieder) who reports the bug. - (https://github.com/bioruby/bioruby/issues/84) ---- - test/unit/bio/db/test_phyloxml.rb | 2 +- - 1 file changed, 1 insertion(+), 1 deletion(-) - -diff --git a/test/unit/bio/db/test_phyloxml.rb b/test/unit/bio/db/test_phyloxml.rb -index 0744c64..c24278d 100644 ---- a/test/unit/bio/db/test_phyloxml.rb -+++ b/test/unit/bio/db/test_phyloxml.rb -@@ -100,7 +100,7 @@ def test_open_with_block - end - - def test_new -- str = File.read(TestPhyloXMLData.example_xml) -+ str = File.open(TestPhyloXMLData.example_xml, "rb") { |f| f.read } - assert_instance_of(Bio::PhyloXML::Parser, - phyloxml = Bio::PhyloXML::Parser.new(str)) - common_test_next_tree(phyloxml) --- -1.8.4 - |