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-rw-r--r--gnu/packages/bioinformatics.scm58
1 files changed, 58 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 6a24e65e34..285343f632 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7167,6 +7167,64 @@ sequence.")
auROC analysis.")
(license license:gpl3))))
+(define-public r-sccustomize
+ (let ((commit "8414d1f5fb32277855b0619191a568932b7baeb0")
+ (revision "1"))
+ (package
+ (name "r-sccustomize")
+ (version (git-version "0.7.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/samuel-marsh/scCustomize")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1wcgfq7lx83a2kf8pjbw524gdvxf351n08cwd5wzmmy57kf4knbj"))))
+ (properties `((upstream-name . "scCustomize")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-circlize
+ r-colorway
+ r-cowplot
+ r-data-table
+ r-dittoseq
+ r-dplyr
+ r-forcats
+ r-ggbeeswarm
+ r-ggplot2
+ r-ggprism
+ r-ggpubr
+ r-ggrastr
+ r-ggrepel
+ r-glue
+ r-janitor
+ r-magrittr
+ r-matrix
+ r-paletteer
+ r-patchwork
+ r-pbapply
+ r-purrr
+ r-remotes
+ r-scales
+ r-scattermore
+ r-seurat
+ r-seuratobject
+ r-stringi
+ r-stringr
+ r-tibble
+ r-tidyr
+ r-tidyselect
+ r-viridis))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/samuel-marsh/scCustomize")
+ (synopsis "Custom visualization and analyses of single-cell sequencing")
+ (description
+ "This is a collection of functions created and/or curated to aid in the
+visualization and analysis of single-cell data using R.")
+ (license license:gpl3+))))
+
(define-public r-snapatac
(package
(name "r-snapatac")