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| author | Ricardo Wurmus <rekado@elephly.net> | 2022-07-04 13:25:03 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2022-07-04 13:48:58 +0200 |
| commit | a0125732ef67a4bebf142a14d5ec69b172068f3f (patch) | |
| tree | 898e44fdc5bdf25a934c25b0937a2501757dc71a | |
| parent | 602cf66c797a54a5632211d2f4d00c02aa701f66 (diff) | |
| download | guix-a0125732ef67a4bebf142a14d5ec69b172068f3f.tar.gz guix-a0125732ef67a4bebf142a14d5ec69b172068f3f.tar.xz | |
gnu: Add r-sccustomize.
* gnu/packages/bioinformatics.scm (r-sccustomize): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 58 |
1 files changed, 58 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 6a24e65e34..285343f632 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -7167,6 +7167,64 @@ sequence.") auROC analysis.") (license license:gpl3)))) +(define-public r-sccustomize + (let ((commit "8414d1f5fb32277855b0619191a568932b7baeb0") + (revision "1")) + (package + (name "r-sccustomize") + (version (git-version "0.7.0" revision commit)) + (source (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/samuel-marsh/scCustomize") + (commit commit))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "1wcgfq7lx83a2kf8pjbw524gdvxf351n08cwd5wzmmy57kf4knbj")))) + (properties `((upstream-name . "scCustomize"))) + (build-system r-build-system) + (propagated-inputs + (list r-circlize + r-colorway + r-cowplot + r-data-table + r-dittoseq + r-dplyr + r-forcats + r-ggbeeswarm + r-ggplot2 + r-ggprism + r-ggpubr + r-ggrastr + r-ggrepel + r-glue + r-janitor + r-magrittr + r-matrix + r-paletteer + r-patchwork + r-pbapply + r-purrr + r-remotes + r-scales + r-scattermore + r-seurat + r-seuratobject + r-stringi + r-stringr + r-tibble + r-tidyr + r-tidyselect + r-viridis)) + (native-inputs (list r-knitr)) + (home-page "https://github.com/samuel-marsh/scCustomize") + (synopsis "Custom visualization and analyses of single-cell sequencing") + (description + "This is a collection of functions created and/or curated to aid in the +visualization and analysis of single-cell data using R.") + (license license:gpl3+)))) + (define-public r-snapatac (package (name "r-snapatac") |